RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 PCDHB6Q9Y5E3 794 aa20.73■□□□□ 0.91
NDEL1-217ENST00000583683 GOLGA6L22H0YM25 854 aa20.72■□□□□ 0.91
NDEL1-217ENST00000583683 ATP2B1P20020 1258 aa20.72■□□□□ 0.91
NDEL1-217ENST00000583683 GHRHRQ02643 423 aa20.72■□□□□ 0.91
NDEL1-217ENST00000583683 AP3B2Q13367 1082 aa20.72■□□□□ 0.91
NDEL1-217ENST00000583683 SF3A1Q15459 793 aaKnown RBP20.72■□□□□ 0.91
NDEL1-217ENST00000583683 SPATA32Q96LK8 384 aa20.72■□□□□ 0.91
NDEL1-217ENST00000583683 TXNRD2Q9NNW7 524 aa20.72■□□□□ 0.91
NDEL1-217ENST00000583683 RNF146Q9NTX7 359 aa20.72■□□□□ 0.91
NDEL1-217ENST00000583683 RBPJLQ9UBG7 517 aa20.72■□□□□ 0.91
NDEL1-217ENST00000583683 RCOR1Q9UKL0 485 aa20.72■□□□□ 0.91
NDEL1-217ENST00000583683 GCOM1H8Y6P7 765 aaPredicted RBP20.71■□□□□ 0.91
NDEL1-217ENST00000583683 POLR2MP0CAP2 368 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 HSD17B4P51659 736 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 MCTP2Q6DN12 878 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 MCF2L2Q86YR7 1114 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 LINC00301Q8NCQ3 95 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 TBCKQ8TEA7 893 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 PAGR1Q9BTK6 254 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 SPATC1LQ9H0A9 340 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 RABGAP1Q9Y3P9 1069 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 DDX11L8A8MPP1 907 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 PRPF40AO75400 957 aaKnown RBP20.71■□□□□ 0.91
NDEL1-217ENST00000583683 YEATS4O95619 227 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 TKFCQ3LXA3 575 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 TTC38Q5R3I4 469 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 RIOX2Q8IUF8 465 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 SMCR8Q8TEV9 937 aaPredicted RBP20.71■□□□□ 0.91
NDEL1-217ENST00000583683 ANO3Q9BYT9 981 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 LMBRD1Q9NUN5 540 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 ELP1O95163 1332 aa20.71■□□□□ 0.91
NDEL1-217ENST00000583683 IGF2BP3O00425 579 aaKnown RBP eCLIP20.7■□□□□ 0.9
NDEL1-217ENST00000583683 FOSP01100 380 aaPredicted RBP20.7■□□□□ 0.9
NDEL1-217ENST00000583683 APLP1P51693 650 aa20.7■□□□□ 0.9
NDEL1-217ENST00000583683 PTPAQ15257 358 aa20.7■□□□□ 0.9
NDEL1-217ENST00000583683 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.7■□□□□ 0.9
NDEL1-217ENST00000583683 CREBZFQ9NS37 354 aa20.7■□□□□ 0.9
NDEL1-217ENST00000583683 SPDYE3A6NKU9 549 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 EDIL3O43854 480 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 SLC39A14Q15043 492 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 CSPP1Q1MSJ5 1256 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 NEK8Q86SG6 692 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 GTF3C2Q8WUA4 911 aaPredicted RBP20.69■□□□□ 0.9
NDEL1-217ENST00000583683 MAP3K20Q9NYL2 800 aaKnown RBP20.69■□□□□ 0.9
NDEL1-217ENST00000583683 INHBEP58166 350 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 STK38Q15208 465 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 Q3C1V9 767 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 CYP4F22Q6NT55 531 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 FCHSD1Q86WN1 690 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 SAMD3Q8N6K7 520 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 PARK7Q99497 189 aaKnown RBP20.69■□□□□ 0.9
NDEL1-217ENST00000583683 MOV10L1Q9BXT6 1211 aaKnown RBP20.69■□□□□ 0.9
NDEL1-217ENST00000583683 ACAD9Q9H845 621 aa20.69■□□□□ 0.9
NDEL1-217ENST00000583683 RASSF10A6NK89 507 aa20.68■□□□□ 0.9
NDEL1-217ENST00000583683 RPS6P62753 249 aaKnown RBP20.68■□□□□ 0.9
NDEL1-217ENST00000583683 ZNF174Q15697 407 aa20.68■□□□□ 0.9
NDEL1-217ENST00000583683 PAXIP1Q6ZW49 1069 aaPredicted RBP20.68■□□□□ 0.9
NDEL1-217ENST00000583683 CHST13Q8NET6 341 aa20.68■□□□□ 0.9
NDEL1-217ENST00000583683 CRYGNQ8WXF5 182 aa20.68■□□□□ 0.9
NDEL1-217ENST00000583683 ZCCHC17Q9NP64 241 aaKnown RBP20.68■□□□□ 0.9
NDEL1-217ENST00000583683 COL20A1Q9P218 1284 aa20.68■□□□□ 0.9
NDEL1-217ENST00000583683 SPTLC2O15270 562 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 GCLCP48506 637 aaPredicted RBP20.67■□□□□ 0.9
NDEL1-217ENST00000583683 ERVK-9P63128 1117 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 ERVK-24P63145 666 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 LETM2Q2VYF4 491 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 RNF207Q6ZRF8 634 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 IFNL1Q8IU54 200 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 KCNG4Q8TDN1 519 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 ZIC5Q96T25 663 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 MCM7P33993 719 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 SREBF1P36956 1147 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 NSMFQ6X4W1 530 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 SLC30A10Q6XR72 485 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 SYTL5Q8TDW5 730 aaPredicted RBP20.67■□□□□ 0.9
NDEL1-217ENST00000583683 CEP131Q9UPN4 1083 aa20.67■□□□□ 0.9
NDEL1-217ENST00000583683 GADD45BO75293 160 aaPredicted RBP20.66■□□□□ 0.9
NDEL1-217ENST00000583683 SREBF2Q12772 1141 aa20.66■□□□□ 0.9
NDEL1-217ENST00000583683 GRM1Q13255 1194 aa20.66■□□□□ 0.9
NDEL1-217ENST00000583683 BAATQ14032 418 aaPredicted RBP20.66■□□□□ 0.9
NDEL1-217ENST00000583683 DEFB115Q30KQ5 88 aa20.66■□□□□ 0.9
NDEL1-217ENST00000583683 ANKRD13CQ8N6S4 541 aa20.66■□□□□ 0.9
NDEL1-217ENST00000583683 A1CFQ9NQ94 594 aaKnown RBP20.66■□□□□ 0.9
NDEL1-217ENST00000583683 LCTP09848 1927 aa20.66■□□□□ 0.9
NDEL1-217ENST00000583683 CCNT1O60563 726 aaKnown RBP20.65■□□□□ 0.9
NDEL1-217ENST00000583683 PPP6R2O75170 966 aa20.65■□□□□ 0.9
NDEL1-217ENST00000583683 SLC25A27O95847 323 aa20.65■□□□□ 0.9
NDEL1-217ENST00000583683 ERCC3P19447 782 aa20.65■□□□□ 0.9
NDEL1-217ENST00000583683 TM4SF4P48230 202 aa20.65■□□□□ 0.9
NDEL1-217ENST00000583683 USP11P51784 963 aa20.65■□□□□ 0.9
NDEL1-217ENST00000583683 ARHGAP4P98171 946 aa20.65■□□□□ 0.9
NDEL1-217ENST00000583683 NCAPG2Q86XI2 1143 aa20.65■□□□□ 0.9
NDEL1-217ENST00000583683 MAF1Q9H063 256 aa20.65■□□□□ 0.9
NDEL1-217ENST00000583683 R3HDMLQ9H3Y0 253 aa20.65■□□□□ 0.9
NDEL1-217ENST00000583683 FBXO40Q9UH90 709 aa20.65■□□□□ 0.9
NDEL1-217ENST00000583683 MRVI1Q9Y6F6 885 aa20.65■□□□□ 0.9
NDEL1-217ENST00000583683 BMP15O95972 392 aa20.64■□□□□ 0.9
NDEL1-217ENST00000583683 MARCKSP29966 332 aaPredicted RBP20.64■□□□□ 0.9
NDEL1-217ENST00000583683 ME1P48163 572 aa20.64■□□□□ 0.9
NDEL1-217ENST00000583683 PTGDRQ13258 359 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms