RNA–Protein interactions for RNA: ENST00000583528.5

SPECC1-222, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, human

TSL 5

Gene SPECC1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPECC1-222	ENST00000583528	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	DHX16	O60231	1041 aa	Known RBP	18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	SNHG28	P0DPA3	235 aa		18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	TMEM63B	Q5T3F8	832 aa		18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	PNMA1	Q8ND90	353 aa		18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	MORC4	Q8TE76	937 aa		18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	CLEC4D	Q8WXI8	215 aa		18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	CDX2	Q99626	313 aa	Predicted RBP	18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	DSCC1	Q9BVC3	393 aa		18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	WDR11	Q9BZH6	1224 aa		18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	CPVL	Q9H3G5	476 aa		18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	WDR19	Q8NEZ3	1342 aa		18.2	■□□□□ 0.5
SPECC1-222	ENST00000583528	LOC102724159	A0A0B4J2E5	919 aa		18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528		B4DLN1	442 aa		18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	ACR	P10323	421 aa		18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	CSF2RA	P15509	400 aa		18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	NT5C2	P49902	561 aa		18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	MRPL12	P52815	198 aa	Known RBP	18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	PSMC6	P62333	389 aa		18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	RPS6	P62753	249 aa	Known RBP	18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	PWP2	Q15269	919 aa	Known RBP	18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	DUSP28	Q4G0W2	176 aa		18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	KRT23	Q9C075	422 aa		18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.19	■□□□□ 0.5
SPECC1-222	ENST00000583528	MYL3	P08590	195 aa		18.18	■□□□□ 0.5
SPECC1-222	ENST00000583528	CYP2C18	P33260	490 aa		18.18	■□□□□ 0.5
SPECC1-222	ENST00000583528	OR6J1	Q8NGC5	347 aa		18.18	■□□□□ 0.5
SPECC1-222	ENST00000583528	MYLIP	Q8WY64	445 aa		18.18	■□□□□ 0.5
SPECC1-222	ENST00000583528	UBAC1	Q9BSL1	405 aa		18.18	■□□□□ 0.5
SPECC1-222	ENST00000583528	SEZ6L	Q9BYH1	1024 aa		18.18	■□□□□ 0.5
SPECC1-222	ENST00000583528	GPHN	Q9NQX3	736 aa	Predicted RBP	18.18	■□□□□ 0.5
SPECC1-222	ENST00000583528	LRRC37A2	A6NM11	1700 aa		18.18	■□□□□ 0.5
SPECC1-222	ENST00000583528	CD4	P01730	458 aa		18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	CPT1A	P50416	773 aa		18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	PPP2R5B	Q15173	497 aa		18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	CDC37	Q16543	378 aa	Predicted RBP	18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	BRDT	Q58F21	947 aa	Predicted RBP	18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	SLC43A3	Q8NBI5	491 aa		18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	DNER	Q8NFT8	737 aa		18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	TTYH1	Q9H313	450 aa	Predicted RBP	18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	HIPK3	Q9H422	1215 aa		18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	CNNM2	Q9H8M5	875 aa		18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	VAT1L	Q9HCJ6	419 aa		18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	POLR3E	Q9NVU0	708 aa		18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	ZSWIM5	Q9P217	1185 aa		18.17	■□□□□ 0.5
SPECC1-222	ENST00000583528	DNAH12	Q6ZR08	3092 aa		18.16	■□□□□ 0.5
SPECC1-222	ENST00000583528	PARP1	P09874	1014 aa	Known RBP	18.16	■□□□□ 0.5
SPECC1-222	ENST00000583528	ASPRV1	Q53RT3	343 aa		18.16	■□□□□ 0.5
SPECC1-222	ENST00000583528	TMEM240	Q5SV17	173 aa		18.16	■□□□□ 0.5
SPECC1-222	ENST00000583528	PSRC1	Q6PGN9	363 aa	Predicted RBP	18.16	■□□□□ 0.5
SPECC1-222	ENST00000583528	ZNF365	Q70YC5	407 aa		18.16	■□□□□ 0.5
SPECC1-222	ENST00000583528	ENAH	Q8N8S7	591 aa	Predicted RBP	18.16	■□□□□ 0.5
SPECC1-222	ENST00000583528	SCFD2	Q8WU76	684 aa		18.16	■□□□□ 0.5
SPECC1-222	ENST00000583528	TRPV6	Q9H1D0	765 aa		18.16	■□□□□ 0.5
SPECC1-222	ENST00000583528	TNKS	O95271	1327 aa		18.16	■□□□□ 0.5
SPECC1-222	ENST00000583528	RAD50	Q92878	1312 aa		18.16	■□□□□ 0.5
SPECC1-222	ENST00000583528	LCT	P09848	1927 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	TMEM265	A0A087WTH1	108 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	B4GALT4	O60513	344 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	FOSL2	P15408	326 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	DNAJB2	P25686	324 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	CCL23	P55773	120 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	FAM47C	Q5HY64	1035 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	IFIT1B	Q5T764	474 aa	Known RBP	18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	C16orf59	Q7L2K0	433 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	ADGRF4	Q8IZF3	695 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	MAFA	Q8NHW3	353 aa	Predicted RBP	18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	ANKS1A	Q92625	1134 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	IL23A	Q9NPF7	189 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	GRIN2D	O15399	1336 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	ABCB11	O95342	1321 aa		18.15	■□□□□ 0.5
SPECC1-222	ENST00000583528	RBM47	A0AV96	593 aa	Known RBP	18.14	■□□□□ 0.49
SPECC1-222	ENST00000583528	NKRF	O15226	690 aa	Known RBP eCLIP	18.14	■□□□□ 0.49
SPECC1-222	ENST00000583528	FGB	P02675	491 aa		18.14	■□□□□ 0.49
SPECC1-222	ENST00000583528	TXN	P10599	105 aa	Known RBP	18.14	■□□□□ 0.49
SPECC1-222	ENST00000583528	TTC22	Q5TAA0	569 aa		18.14	■□□□□ 0.49
SPECC1-222	ENST00000583528	MCF2L2	Q86YR7	1114 aa		18.14	■□□□□ 0.49
SPECC1-222	ENST00000583528	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	18.14	■□□□□ 0.49
SPECC1-222	ENST00000583528	RGS22	Q8NE09	1264 aa		18.14	■□□□□ 0.49
SPECC1-222	ENST00000583528	MTG1	Q9BT17	334 aa	Predicted RBP	18.14	■□□□□ 0.49
SPECC1-222	ENST00000583528	MTIF3	Q9H2K0	278 aa	Known RBP	18.14	■□□□□ 0.49
SPECC1-222	ENST00000583528	SUPT20HL2	P0C7V6	817 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	CHMP4BP1	P59074	171 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	TRDN	Q13061	729 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	TTLL4	Q14679	1199 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	QRICH1	Q2TAL8	776 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	FBXO11	Q86XK2	927 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	RUFY2	Q8WXA3	655 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	TBC1D5	Q92609	795 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	COPS5	Q92905	334 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	TIFA	Q96CG3	184 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	MRPL11	Q9Y3B7	192 aa	Known RBP	18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	LAMA4	Q16363	1823 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	UMODL1	Q5DID0	1318 aa		18.13	■□□□□ 0.49
SPECC1-222	ENST00000583528	LAMA3	Q16787	3333 aa		18.12	■□□□□ 0.49
SPECC1-222	ENST00000583528	GRXCR1	A8MXD5	290 aa		18.12	■□□□□ 0.49
SPECC1-222	ENST00000583528	EDNRB	P24530	442 aa		18.12	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms