RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 CALML3P27482 149 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 NKX3-2P78367 333 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 SLC30A10Q6XR72 485 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 NFXL1Q6ZNB6 911 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 RNF180Q86T96 592 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 TBC1D5Q92609 795 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 TSEN34Q9BSV6 310 aaKnown RBP16.22■□□□□ 0.19
GGA3-215ENST00000582821 SPZ1Q9BXG8 430 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 SENP6Q9GZR1 1112 aaPredicted RBP16.22■□□□□ 0.19
GGA3-215ENST00000582821 VTA1Q9NP79 307 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 SLC12A7Q9Y666 1083 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 H0YGN5 161 aa16.21■□□□□ 0.19
GGA3-215ENST00000582821 EDNRBP24530 442 aa16.21■□□□□ 0.19
GGA3-215ENST00000582821 IQSEC1Q6DN90 963 aa16.21■□□□□ 0.19
GGA3-215ENST00000582821 TAPT1Q6NXT6 567 aa16.21■□□□□ 0.19
GGA3-215ENST00000582821 KLHDC9Q8NEP7 349 aa16.21■□□□□ 0.19
GGA3-215ENST00000582821 SYTL5Q8TDW5 730 aaPredicted RBP16.21■□□□□ 0.19
GGA3-215ENST00000582821 PIGSQ96S52 555 aa16.21■□□□□ 0.19
GGA3-215ENST00000582821 MPHOSPH6Q99547 160 aaKnown RBP16.21■□□□□ 0.19
GGA3-215ENST00000582821 MYL10Q9BUA6 226 aa16.21■□□□□ 0.19
GGA3-215ENST00000582821 LRRC2Q9BYS8 371 aa16.21■□□□□ 0.19
GGA3-215ENST00000582821 UPF3AQ9H1J1 476 aaKnown RBP16.21■□□□□ 0.19
GGA3-215ENST00000582821 PHF24Q9UPV7 400 aa16.21■□□□□ 0.19
GGA3-215ENST00000582821 PCDHA1Q9Y5I3 950 aa16.21■□□□□ 0.19
GGA3-215ENST00000582821 SNX14Q9Y5W7 946 aa16.21■□□□□ 0.19
GGA3-215ENST00000582821 RBM47A0AV96 593 aaKnown RBP16.2■□□□□ 0.18
GGA3-215ENST00000582821 B4DLN1 442 aa16.2■□□□□ 0.18
GGA3-215ENST00000582821 OPLAHO14841 1288 aa16.2■□□□□ 0.18
GGA3-215ENST00000582821 ADCY6O43306 1168 aa16.2■□□□□ 0.18
GGA3-215ENST00000582821 PGK1P00558 417 aa16.2■□□□□ 0.18
GGA3-215ENST00000582821 CST5P28325 142 aaPredicted RBP16.2■□□□□ 0.18
GGA3-215ENST00000582821 HSD17B4P51659 736 aa16.2■□□□□ 0.18
GGA3-215ENST00000582821 MRPL12P52815 198 aaKnown RBP16.2■□□□□ 0.18
GGA3-215ENST00000582821 GJA9P57773 515 aa16.2■□□□□ 0.18
GGA3-215ENST00000582821 CCSAPQ6IQ19 270 aaPredicted RBP16.2■□□□□ 0.18
GGA3-215ENST00000582821 FBXL16Q8N461 479 aa16.2■□□□□ 0.18
GGA3-215ENST00000582821 FANCBQ8NB91 859 aa16.2■□□□□ 0.18
GGA3-215ENST00000582821 USP26Q9BXU7 913 aa16.2■□□□□ 0.18
GGA3-215ENST00000582821 GNEQ9Y223 722 aaKnown RBP16.2■□□□□ 0.18
GGA3-215ENST00000582821 Q9Y3F1 56 aa16.2■□□□□ 0.18
GGA3-215ENST00000582821 TNFAIP2Q03169 654 aa16.19■□□□□ 0.18
GGA3-215ENST00000582821 LRRC26Q2I0M4 334 aa16.19■□□□□ 0.18
GGA3-215ENST00000582821 C1orf53Q5VUE5 145 aa16.19■□□□□ 0.18
GGA3-215ENST00000582821 SYNE3Q6ZMZ3 975 aa16.19■□□□□ 0.18
GGA3-215ENST00000582821 HOMER1Q86YM7 354 aa16.19■□□□□ 0.18
GGA3-215ENST00000582821 SRBD1Q8N5C6 995 aaKnown RBP16.19■□□□□ 0.18
GGA3-215ENST00000582821 NSUN6Q8TEA1 469 aaKnown RBP16.19■□□□□ 0.18
GGA3-215ENST00000582821 TAAR1Q96RJ0 339 aa16.19■□□□□ 0.18
GGA3-215ENST00000582821 IWS1Q96ST2 819 aa16.19■□□□□ 0.18
GGA3-215ENST00000582821 DDX49Q9Y6V7 483 aaKnown RBP16.19■□□□□ 0.18
GGA3-215ENST00000582821 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
GGA3-215ENST00000582821 MOXD2PA6NHM9 499 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 SMPD1P17405 629 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 PSMA5P28066 241 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 ADCYAP1R1P41586 468 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 RCAN1P53805 252 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 SNX17Q15036 470 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 APOA5Q6Q788 366 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 SLC39A5Q6ZMH5 540 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 LENG1Q96BZ8 264 aaPredicted RBP16.18■□□□□ 0.18
GGA3-215ENST00000582821 RRP36Q96EU6 259 aaKnown RBP16.18■□□□□ 0.18
GGA3-215ENST00000582821 JAKMIP1Q96N16 626 aaKnown RBP16.18■□□□□ 0.18
GGA3-215ENST00000582821 SPC25Q9HBM1 224 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 PDGFCQ9NRA1 345 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 COL20A1Q9P218 1284 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 LRRC37A2A6NM11 1700 aa16.18■□□□□ 0.18
GGA3-215ENST00000582821 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.17■□□□□ 0.18
GGA3-215ENST00000582821 CTAGE5O15320 804 aa16.17■□□□□ 0.18
GGA3-215ENST00000582821 PLEKHA8P1O95397 391 aa16.17■□□□□ 0.18
GGA3-215ENST00000582821 CFBP00751 764 aa16.17■□□□□ 0.18
GGA3-215ENST00000582821 PDE4DQ08499 809 aa16.17■□□□□ 0.18
GGA3-215ENST00000582821 DUSP28Q4G0W2 176 aa16.17■□□□□ 0.18
GGA3-215ENST00000582821 BLOC1S2Q6QNY1 142 aa16.17■□□□□ 0.18
GGA3-215ENST00000582821 EEPD1Q7L9B9 569 aa16.17■□□□□ 0.18
GGA3-215ENST00000582821 FBXO16Q8IX29 292 aaPredicted RBP16.17■□□□□ 0.18
GGA3-215ENST00000582821 PCSK9Q8NBP7 692 aaKnown RBP16.17■□□□□ 0.18
GGA3-215ENST00000582821 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
GGA3-215ENST00000582821 RMDN3Q96TC7 470 aa16.17■□□□□ 0.18
GGA3-215ENST00000582821 AGXT2Q9BYV1 514 aa16.17■□□□□ 0.18
GGA3-215ENST00000582821 RBM28Q9NW13 759 aaKnown RBP16.17■□□□□ 0.18
GGA3-215ENST00000582821 BRPF3Q9ULD4 1205 aa16.17■□□□□ 0.18
GGA3-215ENST00000582821 MYCNP04198 464 aaPredicted RBP16.16■□□□□ 0.18
GGA3-215ENST00000582821 RXRAP19793 462 aa16.16■□□□□ 0.18
GGA3-215ENST00000582821 ACLYP53396 1101 aa16.16■□□□□ 0.18
GGA3-215ENST00000582821 PPP2R5BQ15173 497 aa16.16■□□□□ 0.18
GGA3-215ENST00000582821 KCNA10Q16322 511 aa16.16■□□□□ 0.18
GGA3-215ENST00000582821 TMTC3Q6ZXV5 915 aa16.16■□□□□ 0.18
GGA3-215ENST00000582821 C7orf61Q8IZ16 206 aa16.16■□□□□ 0.18
GGA3-215ENST00000582821 TRIOBPQ9H2D6 2365 aa16.16■□□□□ 0.18
GGA3-215ENST00000582821 RANBP2P49792 3224 aaKnown RBP16.16■□□□□ 0.18
GGA3-215ENST00000582821 KIAA1217Q5T5P2 1943 aa16.15■□□□□ 0.18
GGA3-215ENST00000582821 MYADML2A6NDP7 307 aa16.15■□□□□ 0.18
GGA3-215ENST00000582821 GCOM1H8Y6P7 765 aaPredicted RBP16.15■□□□□ 0.18
GGA3-215ENST00000582821 NKRFO15226 690 aaKnown RBP eCLIP16.15■□□□□ 0.18
GGA3-215ENST00000582821 ZBTB43O43298 467 aa16.15■□□□□ 0.18
GGA3-215ENST00000582821 C6orf222P0C671 652 aaPredicted RBP16.15■□□□□ 0.18
GGA3-215ENST00000582821 POLR2MP0CAP2 368 aa16.15■□□□□ 0.18
GGA3-215ENST00000582821 RPS6KB1P23443 525 aa16.15■□□□□ 0.18
GGA3-215ENST00000582821 ATN1P54259 1190 aaPredicted RBP16.15■□□□□ 0.18
GGA3-215ENST00000582821 STXBP2Q15833 593 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms