RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 COL9A1P20849 921 aa16.04■□□□□ 0.16
SS18-222ENST00000582792 NOVP48745 357 aa16.04■□□□□ 0.16
SS18-222ENST00000582792 RABGGTBP53611 331 aa16.04■□□□□ 0.16
SS18-222ENST00000582792 CTDSPL2Q05D32 466 aa16.04■□□□□ 0.16
SS18-222ENST00000582792 DUSP28Q4G0W2 176 aa16.04■□□□□ 0.16
SS18-222ENST00000582792 SCLYQ96I15 445 aa16.04■□□□□ 0.16
SS18-222ENST00000582792 RANBP17Q9H2T7 1088 aaKnown RBP16.04■□□□□ 0.16
SS18-222ENST00000582792 INCENPQ9NQS7 918 aa16.04■□□□□ 0.16
SS18-222ENST00000582792 PCDHA11Q9Y5I1 949 aa16.04■□□□□ 0.16
SS18-222ENST00000582792 LOC102724159A0A0B4J2E5 919 aa16.03■□□□□ 0.16
SS18-222ENST00000582792 CENPBP07199 599 aaPredicted RBP16.03■□□□□ 0.16
SS18-222ENST00000582792 PFKMP08237 780 aa16.03■□□□□ 0.16
SS18-222ENST00000582792 SUPT20HL2P0C7V6 817 aa16.03■□□□□ 0.16
SS18-222ENST00000582792 PWP2Q15269 919 aaKnown RBP16.03■□□□□ 0.16
SS18-222ENST00000582792 PPP2R2DQ66LE6 453 aa16.03■□□□□ 0.16
SS18-222ENST00000582792 DCAF4Q8WV16 495 aa16.03■□□□□ 0.16
SS18-222ENST00000582792 UHRF1Q96T88 793 aaPredicted RBP16.03■□□□□ 0.16
SS18-222ENST00000582792 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
SS18-222ENST00000582792 ADD3Q9UEY8 706 aaKnown RBP16.03■□□□□ 0.16
SS18-222ENST00000582792 ANAPC4Q9UJX5 808 aa16.03■□□□□ 0.16
SS18-222ENST00000582792 ZBBXA8MT70 800 aa16.02■□□□□ 0.16
SS18-222ENST00000582792 MYOGP15173 224 aa16.02■□□□□ 0.16
SS18-222ENST00000582792 ATP2A2P16615 1042 aaKnown RBP16.02■□□□□ 0.16
SS18-222ENST00000582792 CPT1AP50416 773 aa16.02■□□□□ 0.16
SS18-222ENST00000582792 ALDH5A1P51649 535 aaPredicted RBP16.02■□□□□ 0.16
SS18-222ENST00000582792 PURAQ00577 322 aaKnown RBP16.02■□□□□ 0.16
SS18-222ENST00000582792 BAATQ14032 418 aaPredicted RBP16.02■□□□□ 0.16
SS18-222ENST00000582792 CCDC96Q2M329 555 aa16.02■□□□□ 0.16
SS18-222ENST00000582792 BTNL9Q6UXG8 535 aa16.02■□□□□ 0.16
SS18-222ENST00000582792 IL27Q8NEV9 243 aa16.02■□□□□ 0.16
SS18-222ENST00000582792 OTUD7AQ8TE49 926 aaPredicted RBP16.02■□□□□ 0.16
SS18-222ENST00000582792 WDR11Q9BZH6 1224 aa16.02■□□□□ 0.16
SS18-222ENST00000582792 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
SS18-222ENST00000582792 TRMT13Q9NUP7 481 aaKnown RBP16.02■□□□□ 0.16
SS18-222ENST00000582792 MTMR7Q9Y216 660 aa16.02■□□□□ 0.16
SS18-222ENST00000582792 TNKSO95271 1327 aa16.01■□□□□ 0.15
SS18-222ENST00000582792 RBM47A0AV96 593 aaKnown RBP16.01■□□□□ 0.15
SS18-222ENST00000582792 NFIBO00712 420 aa16.01■□□□□ 0.15
SS18-222ENST00000582792 RANBP6O60518 1105 aaKnown RBP16.01■□□□□ 0.15
SS18-222ENST00000582792 CYP2C9P11712 490 aa16.01■□□□□ 0.15
SS18-222ENST00000582792 SLC16A2P36021 539 aa16.01■□□□□ 0.15
SS18-222ENST00000582792 TTLL4Q14679 1199 aa16.01■□□□□ 0.15
SS18-222ENST00000582792 TTBK2Q6IQ55 1244 aa16.01■□□□□ 0.15
SS18-222ENST00000582792 ORC4O43929 436 aa16■□□□□ 0.15
SS18-222ENST00000582792 FGRP09769 529 aa16■□□□□ 0.15
SS18-222ENST00000582792 MX1P20591 662 aa16■□□□□ 0.15
SS18-222ENST00000582792 SYDE2Q5VT97 1194 aa16■□□□□ 0.15
SS18-222ENST00000582792 CRBNQ96SW2 442 aa16■□□□□ 0.15
SS18-222ENST00000582792 SCN10AQ9Y5Y9 1956 aa15.99■□□□□ 0.15
SS18-222ENST00000582792 PTPDC1A2A3K4 754 aa15.99■□□□□ 0.15
SS18-222ENST00000582792 MYL3P08590 195 aa15.99■□□□□ 0.15
SS18-222ENST00000582792 TMEM67Q5HYA8 995 aa15.99■□□□□ 0.15
SS18-222ENST00000582792 VPS53Q5VIR6 699 aa15.99■□□□□ 0.15
SS18-222ENST00000582792 SLC30A10Q6XR72 485 aa15.99■□□□□ 0.15
SS18-222ENST00000582792 DEFB128Q7Z7B8 93 aa15.99■□□□□ 0.15
SS18-222ENST00000582792 MICALL1Q8N3F8 863 aa15.99■□□□□ 0.15
SS18-222ENST00000582792 OR6J1Q8NGC5 347 aa15.99■□□□□ 0.15
SS18-222ENST00000582792 MTG1Q9BT17 334 aaPredicted RBP15.99■□□□□ 0.15
SS18-222ENST00000582792 GPHNQ9NQX3 736 aaPredicted RBP15.99■□□□□ 0.15
SS18-222ENST00000582792 SCN5AQ14524 2016 aa15.99■□□□□ 0.15
SS18-222ENST00000582792 NKRFO15226 690 aaKnown RBP eCLIP15.98■□□□□ 0.15
SS18-222ENST00000582792 CA3P07451 260 aa15.98■□□□□ 0.15
SS18-222ENST00000582792 TOP1P11387 765 aaKnown RBP15.98■□□□□ 0.15
SS18-222ENST00000582792 ACTN1P12814 892 aa15.98■□□□□ 0.15
SS18-222ENST00000582792 POU3F3P20264 500 aaPredicted RBP15.98■□□□□ 0.15
SS18-222ENST00000582792 RFC2P35250 354 aa15.98■□□□□ 0.15
SS18-222ENST00000582792 ALX1Q15699 326 aa15.98■□□□□ 0.15
SS18-222ENST00000582792 NBPF20Q3BBV1 942 aa15.98■□□□□ 0.15
SS18-222ENST00000582792 BRDTQ58F21 947 aaPredicted RBP15.98■□□□□ 0.15
SS18-222ENST00000582792 CLEC4DQ8WXI8 215 aa15.98■□□□□ 0.15
SS18-222ENST00000582792 TMEM47Q9BQJ4 181 aa15.98■□□□□ 0.15
SS18-222ENST00000582792 PNMA2Q9UL42 364 aa15.98■□□□□ 0.15
SS18-222ENST00000582792 FRMPD2Q68DX3 1309 aaPredicted RBP15.97■□□□□ 0.15
SS18-222ENST00000582792 RAD50Q92878 1312 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 SALL3Q9BXA9 1300 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 TANC1Q9C0D5 1861 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 PITPNM1O00562 1244 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 BMP1P13497 986 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 EDNRBP24530 442 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 CALML3P27482 149 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 PPP2R5BQ15173 497 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 AAK1Q2M2I8 961 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 FAM47CQ5HY64 1035 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 NFRKBQ6P4R8 1299 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 RNF207Q6ZRF8 634 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 PHOSPHO2Q8TCD6 241 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 SLC9A7Q96T83 725 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 GPCPD1Q9NPB8 672 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 TCP11L1Q9NUJ3 509 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 RAPGEFL1Q9UHV5 662 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 PCDHB15Q9Y5E8 787 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 MTCH2Q9Y6C9 303 aa15.97■□□□□ 0.15
SS18-222ENST00000582792 A6NJR5 290 aa15.96■□□□□ 0.15
SS18-222ENST00000582792 RFXAPO00287 272 aa15.96■□□□□ 0.15
SS18-222ENST00000582792 KPNA6O60684 536 aa15.96■□□□□ 0.15
SS18-222ENST00000582792 IQCF3P0C7M6 154 aa15.96■□□□□ 0.15
SS18-222ENST00000582792 PDHBP11177 359 aa15.96■□□□□ 0.15
SS18-222ENST00000582792 RPS6P62753 249 aaKnown RBP15.96■□□□□ 0.15
SS18-222ENST00000582792 TFF2Q03403 129 aa15.96■□□□□ 0.15
SS18-222ENST00000582792 PTPN11Q06124 597 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms