RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TRIM65Q6PJ69 517 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 LIMA1Q9UHB6 759 aaKnown RBP15.32■□□□□ 0.04
SRSF1-205ENST00000582730 PNMA6FA0A0J9YX94 578 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 KLRC4O43908 158 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 PNMA6AP0CW24 399 aaPredicted RBP15.32■□□□□ 0.04
SRSF1-205ENST00000582730 ARHGAP29Q52LW3 1261 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 HPS3Q969F9 1004 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 DDTLA6NHG4 134 aaPredicted RBP15.32■□□□□ 0.04
SRSF1-205ENST00000582730 H7C1D1 291 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 PPP1R11O60927 126 aaPredicted RBP15.32■□□□□ 0.04
SRSF1-205ENST00000582730 CCDC175P0C221 793 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 CNGA4Q8IV77 575 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 MNS1Q8NEH6 495 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 FLAD1Q8NFF5 587 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 GJA10Q969M2 543 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 PANX2Q96RD6 677 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 TRIM9Q9C026 710 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.32■□□□□ 0.044e-17■■■□□ 14.8
SRSF1-205ENST00000582730 PHLPP2Q6ZVD8 1323 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 hCG_1984214I3L0E3 225 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 PLSCR1O15162 318 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 SNHG28P0DPA3 235 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 CAPN2P17655 700 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 CASQ1P31415 396 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 PBX1P40424 430 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 SLC1A4P43007 532 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 PLA2G4AP47712 749 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 IKQ13123 557 aaPredicted RBP15.31■□□□□ 0.04
SRSF1-205ENST00000582730 KCNB1Q14721 858 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 RAD9BQ6WBX8 426 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 ZNF713Q8N859 430 aaPredicted RBP15.31■□□□□ 0.04
SRSF1-205ENST00000582730 MYH8P13535 1937 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 GOLGA6L9A6NEM1 432 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 TULP2O00295 520 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 RHOBTB3O94955 611 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 GDF11O95390 407 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 TUBB4AP04350 444 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 FCER1AP12319 257 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 HNRNPH2P55795 449 aaKnown RBP15.31■□□□□ 0.04
SRSF1-205ENST00000582730 AOC3Q16853 763 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
SRSF1-205ENST00000582730 GPATCH4Q5T3I0 446 aaKnown RBP15.31■□□□□ 0.04
SRSF1-205ENST00000582730 DYMQ7RTS9 669 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 CSGALNACT2Q8N6G5 542 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 CUL5Q93034 780 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 TRERF1Q96PN7 1200 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 CUEDC2Q9H467 287 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 DNAJC18Q9H819 358 aa15.31■□□□□ 0.04
SRSF1-205ENST00000582730 EEF2P13639 858 aaKnown RBP15.3■□□□□ 0.04
SRSF1-205ENST00000582730 IDEP14735 1019 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 AMPD3Q01432 767 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 SNX29Q8TEQ0 813 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 ZDHHC15Q96MV8 337 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 WDR24Q96S15 920 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 MMTAG2Q9BU76 263 aaKnown RBP15.3■□□□□ 0.04
SRSF1-205ENST00000582730 MRPL44Q9H9J2 332 aaKnown RBP15.3■□□□□ 0.04
SRSF1-205ENST00000582730 MYL1P05976 194 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 STK4Q13043 487 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 MCM6Q14566 821 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 GIMAP8Q8ND71 665 aaPredicted RBP15.3■□□□□ 0.04
SRSF1-205ENST00000582730 RAB34Q9BZG1 259 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 IRX2Q9BZI1 471 aaPredicted RBP15.3■□□□□ 0.04
SRSF1-205ENST00000582730 PSTPIP2Q9H939 334 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 ZBTB5O15062 677 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 MRPL12P52815 198 aaKnown RBP15.3■□□□□ 0.04
SRSF1-205ENST00000582730 SNAP25P60880 206 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 SV2BQ7L1I2 683 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 SLC39A2Q9NP94 309 aa15.3■□□□□ 0.04
SRSF1-205ENST00000582730 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.3■□□□□ 0.04
SRSF1-205ENST00000582730 FANCGO15287 622 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 KRT9P35527 623 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 SEPT2Q15019 361 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 CCDC17Q96LX7 622 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 PCMTD1Q96MG8 357 aaPredicted RBP15.29■□□□□ 0.04
SRSF1-205ENST00000582730 TDRD3Q9H7E2 651 aaKnown RBP15.29■□□□□ 0.04
SRSF1-205ENST00000582730 MAGEF1Q9HAY2 307 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 RIC8AQ9NPQ8 531 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 DDX25Q9UHL0 483 aaKnown RBP15.29■□□□□ 0.04
SRSF1-205ENST00000582730 A0A0U1RQJ8 604 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 USP17L15C9J2P7 530 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 USP17L13C9JLJ4 530 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 USP17L11C9JVI0 530 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 USP17L18D6R9N7 530 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 USP17L22D6RA61 530 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 USP17L17D6RBQ6 530 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 USP17L19D6RCP7 530 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 USP17L20D6RJB6 530 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 SSBP05455 408 aaKnown RBP eCLIP15.29■□□□□ 0.04
SRSF1-205ENST00000582730 USP17L24Q0WX57 530 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 STRIP1Q5VSL9 837 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 KRT79Q5XKE5 535 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 SLFN13Q68D06 897 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 USP17L6PQ6QN14 398 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 IRF2BP1Q8IU81 584 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 ATRIPQ8WXE1 791 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 PI4KBQ9UBF8 816 aa15.29■□□□□ 0.04
SRSF1-205ENST00000582730 DACT2Q5SW24 774 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 CARD6Q9BX69 1037 aa15.28■□□□□ 0.04
SRSF1-205ENST00000582730 NAA15Q9BXJ9 866 aaKnown RBP15.28■□□□□ 0.04
SRSF1-205ENST00000582730 FAM198AQ9UFP1 575 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms