RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNRPD1-204ENST00000582475 NPLOC4Q8TAT6 608 aa13.94□□□□□ -0.18
SNRPD1-204ENST00000582475 CLEC4DQ8WXI8 215 aa13.94□□□□□ -0.18
SNRPD1-204ENST00000582475 SLKQ9H2G2 1235 aaPredicted RBP13.94□□□□□ -0.18
SNRPD1-204ENST00000582475 NCOA5Q9HCD5 579 aaKnown RBP13.94□□□□□ -0.18
SNRPD1-204ENST00000582475 SLC5A4Q9NY91 659 aa13.94□□□□□ -0.18
SNRPD1-204ENST00000582475 SEC63Q9UGP8 760 aaKnown RBP13.94□□□□□ -0.18
SNRPD1-204ENST00000582475 MRPL11Q9Y3B7 192 aaKnown RBP13.94□□□□□ -0.18
SNRPD1-204ENST00000582475 PCDHA1Q9Y5I3 950 aa13.94□□□□□ -0.18
SNRPD1-204ENST00000582475 V9GY48 417 aaPredicted RBP13.94□□□□□ -0.18
SNRPD1-204ENST00000582475 ABCB11O95342 1321 aa13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 A0A0G2JMZ2 1700 aa13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 ZSWIM8A7E2V4 1837 aa13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 ADCY3O60266 1144 aa13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 PFKFB2O60825 505 aa13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 PPP1R11O60927 126 aaPredicted RBP13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 PGK2P07205 417 aa13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 XRCC5P13010 732 aaKnown RBP13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 NSMFQ6X4W1 530 aa13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 RGS22Q8NE09 1264 aa13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 IL27Q8NEV9 243 aa13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 PXYLP1Q8TE99 480 aa13.93□□□□□ -0.18
SNRPD1-204ENST00000582475 NFIBO00712 420 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 CPLX1O14810 134 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 PRPF3O43395 683 aaKnown RBP13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 HOXC6P09630 235 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 GRK4P32298 578 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 AKAP17AQ02040 695 aaKnown RBP13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 SCRN1Q12765 414 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 BAATQ14032 418 aaPredicted RBP13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 NTRK3Q16288 839 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 ME3Q16798 604 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 ZNF792Q3KQV3 632 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 CPLX2Q6PUV4 134 aaKnown RBP13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 MCF2L2Q86YR7 1114 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 TBC1D5Q92609 795 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 A1CFQ9NQ94 594 aaKnown RBP13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 LIMCH1Q9UPQ0 1083 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 DIS3Q9Y2L1 958 aaKnown RBP13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 NID2Q14112 1375 aa13.92□□□□□ -0.18
SNRPD1-204ENST00000582475 CNTNAP5Q8WYK1 1306 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 DNAJC25-GNG10A0A024R161 153 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 PTPDC1A2A3K4 754 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 ST18O60284 1047 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 ELNP15502 786 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 IFNAR1P17181 557 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 CCL14Q16627 93 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 SLC9C1Q4G0N8 1177 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 RNF207Q6ZRF8 634 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 TRMT44Q8IYL2 757 aaKnown RBP13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 NECAB1Q8N987 351 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 PHKBQ93100 1093 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 ZSCAN31Q96LW9 406 aaPredicted RBP13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 APBA2Q99767 749 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 MAF1Q9H063 256 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 CYP39A1Q9NYL5 469 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 BIN2Q9UBW5 565 aaPredicted RBP13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 BOLA1Q9Y3E2 137 aa13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 ZNFX1Q9P2E3 1918 aaKnown RBP13.91□□□□□ -0.18
SNRPD1-204ENST00000582475 PFASO15067 1338 aa13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 LARGE1O95461 756 aa13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 CALML3P27482 149 aa13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 RPS6P62753 249 aaKnown RBP13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 CNTN2Q02246 1040 aa13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 SSRP1Q08945 709 aaKnown RBP13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 TNS4Q8IZW8 715 aa13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 SH3TC2Q8TF17 1288 aa13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 MAML3Q96JK9 1138 aa13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 SLC26A6Q9BXS9 759 aa13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 FLRT1Q9NZU1 646 aa13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 RBM27Q9P2N5 1060 aaKnown RBP13.9□□□□□ -0.18
SNRPD1-204ENST00000582475 PPFIA3O75145 1194 aa13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 CFBP00751 764 aa13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 UBXN2AP68543 259 aa13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 PFKFB3Q16875 520 aaPredicted RBP13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 MFSD14CQ5VZR4 134 aa13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 OLFML2BQ68BL8 750 aa13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 SAMD3Q8N6K7 520 aa13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 FAM133AQ8N9E0 248 aa13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 TRIB2Q92519 343 aa13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 PURBQ96QR8 312 aaKnown RBP13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 RNF26Q9BY78 433 aaPredicted RBP13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 MAP3K20Q9NYL2 800 aaKnown RBP13.89□□□□□ -0.19
SNRPD1-204ENST00000582475 SOWAHBA6NEL2 793 aa13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 GCOM1H8Y6P7 765 aaPredicted RBP13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 OPLAHO14841 1288 aa13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 CDKL5O76039 1030 aa13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 HMGCRP04035 888 aa13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 POLR2MP0CAP2 368 aa13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 MCM2P49736 904 aa13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 PKN1Q16512 942 aa13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 WWC2Q6AWC2 1192 aa13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 TRIM22Q8IYM9 498 aa13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 SYTL5Q8TDW5 730 aaPredicted RBP13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 GPKOWQ92917 476 aaPredicted RBP eCLIP13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 GTF3C6Q969F1 213 aa13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 ARMC5Q96C12 935 aa13.88□□□□□ -0.19
SNRPD1-204ENST00000582475 MYH6P13533 1939 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms