RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 GPATCH4Q5T3I0 446 aaKnown RBP14.42□□□□□ -0.1
SRSF1-204ENST00000581979 GPR142Q7Z601 462 aa14.42□□□□□ -0.1
SRSF1-204ENST00000581979 DEFB118Q96PH6 123 aa14.42□□□□□ -0.1
SRSF1-204ENST00000581979 SEC63Q9UGP8 760 aaKnown RBP14.42□□□□□ -0.1
SRSF1-204ENST00000581979 RPTORQ8N122 1335 aa14.42□□□□□ -0.1
SRSF1-204ENST00000581979 BAZ2BQ9UIF8 2168 aaKnown RBP14.42□□□□□ -0.1
SRSF1-204ENST00000581979 GOLGA6L4A6NEF3 574 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 SPDYE16A6NNV3 312 aaPredicted RBP14.41□□□□□ -0.1
SRSF1-204ENST00000581979 CYP2B6P20813 491 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 SLC1A4P43007 532 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 CCNA1P78396 465 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 MORN1Q5T089 497 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 PLEKHH3Q7Z736 793 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 HOMER1Q86YM7 354 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 NOSTRINQ8IVI9 506 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 CCAR1Q8IX12 1150 aaKnown RBP14.41□□□□□ -0.1
SRSF1-204ENST00000581979 GMCL1P1Q8NEA9 526 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 TRIB2Q92519 343 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 LPAR1Q92633 364 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
SRSF1-204ENST00000581979 FTOQ9C0B1 505 aaKnown RBP eCLIP14.41□□□□□ -0.1
SRSF1-204ENST00000581979 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.41□□□□□ -0.1
SRSF1-204ENST00000581979 SH3GLB2Q9NR46 395 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 FARP2O94887 1054 aaPredicted RBP14.41□□□□□ -0.1
SRSF1-204ENST00000581979 COG2Q14746 738 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 MAP3K21Q5TCX8 1036 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 CAVIN1Q6NZI2 390 aaKnown RBP14.41□□□□□ -0.1
SRSF1-204ENST00000581979 KCTD1Q719H9 257 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 HEATR3Q7Z4Q2 680 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 TRMT44Q8IYL2 757 aaKnown RBP14.41□□□□□ -0.1
SRSF1-204ENST00000581979 CCDC148Q8NFR7 591 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 RIOX1Q9H6W3 641 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 HOXC10Q9NYD6 342 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 RTEL1Q9NZ71 1219 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 BTBD7Q9P203 1132 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 SYNPO2Q9UMS6 1093 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 TMX2Q9Y320 296 aa14.41□□□□□ -0.1
SRSF1-204ENST00000581979 F5H6K3 240 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 TFRCP02786 760 aaKnown RBP14.4□□□□□ -0.1
SRSF1-204ENST00000581979 KLRC3Q07444 240 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 TRIM32Q13049 653 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 NR5A1Q13285 461 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 STK38Q15208 465 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 KIAA1755Q5JYT7 1200 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 WWC2Q6AWC2 1192 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 TTBK2Q6IQ55 1244 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 OXER1Q8TDS5 423 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 PIGSQ96S52 555 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 SH2D4AQ9H788 454 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 HMX1Q9NP08 348 aaPredicted RBP14.4□□□□□ -0.1
SRSF1-204ENST00000581979 RCOR1Q9UKL0 485 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 RLFQ13129 1914 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 CEP290O15078 2479 aa14.4□□□□□ -0.1
SRSF1-204ENST00000581979 NDUFB10O96000 172 aa14.39□□□□□ -0.11
SRSF1-204ENST00000581979 CALML3P27482 149 aa14.39□□□□□ -0.11
SRSF1-204ENST00000581979 RGS2P41220 211 aa14.39□□□□□ -0.11
SRSF1-204ENST00000581979 ANO1Q5XXA6 986 aa14.39□□□□□ -0.11
SRSF1-204ENST00000581979 HTATIP2Q9BUP3 242 aa14.39□□□□□ -0.11
SRSF1-204ENST00000581979 VCPKMTQ9H867 229 aa14.39□□□□□ -0.11
SRSF1-204ENST00000581979 POLR3EQ9NVU0 708 aa14.39□□□□□ -0.11
SRSF1-204ENST00000581979 BARHL2Q9NY43 387 aa14.39□□□□□ -0.11
SRSF1-204ENST00000581979 CLIC4Q9Y696 253 aa14.39□□□□□ -0.11
SRSF1-204ENST00000581979 STXBP3O00186 592 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 YEATS4O95619 227 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 SLC16A2P36021 539 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 SF3A1Q15459 793 aaKnown RBP14.38□□□□□ -0.11
SRSF1-204ENST00000581979 ADGRF4Q8IZF3 695 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 ANKLE1Q8NAG6 615 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 CCDC12Q8WUD4 166 aaPredicted RBP14.38□□□□□ -0.11
SRSF1-204ENST00000581979 GMCL1Q96IK5 515 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 APBA2Q99767 749 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 TANGO6Q9C0B7 1094 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 GOPCQ9HD26 462 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 A0A0G2JMZ2 1700 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 SLC15A5A6NIM6 579 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 H0YGN5 161 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 hCG_1984214I3L0E3 225 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 BMP3P12645 472 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 PRKAR2AP13861 404 aaKnown RBP14.38□□□□□ -0.11
SRSF1-204ENST00000581979 PTPREP23469 700 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 NASPP49321 788 aaPredicted RBP14.38□□□□□ -0.11
SRSF1-204ENST00000581979 NAPAP54920 295 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 MAP2K5Q13163 448 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 GSE1Q14687 1217 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 RILPL1Q5EBL4 403 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 FAM177A1Q8N128 213 aaPredicted RBP14.38□□□□□ -0.11
SRSF1-204ENST00000581979 ZNF713Q8N859 430 aaPredicted RBP14.38□□□□□ -0.11
SRSF1-204ENST00000581979 LINC00301Q8NCQ3 95 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 DPF3Q92784 378 aa14.38□□□□□ -0.11
SRSF1-204ENST00000581979 SYAP1Q96A49 352 aaPredicted RBP14.38□□□□□ -0.11
SRSF1-204ENST00000581979 WDR46O15213 610 aaKnown RBP14.37□□□□□ -0.11
SRSF1-204ENST00000581979 HOXC6P09630 235 aa14.37□□□□□ -0.11
SRSF1-204ENST00000581979 IKQ13123 557 aaPredicted RBP14.37□□□□□ -0.11
SRSF1-204ENST00000581979 GRB14Q14449 540 aa14.37□□□□□ -0.11
SRSF1-204ENST00000581979 NPY5RQ15761 445 aa14.37□□□□□ -0.11
SRSF1-204ENST00000581979 HABP4Q5JVS0 413 aaKnown RBP14.37□□□□□ -0.11
SRSF1-204ENST00000581979 GALNT17Q6IS24 598 aa14.37□□□□□ -0.11
SRSF1-204ENST00000581979 TYW1BQ6NUM6 668 aa14.37□□□□□ -0.11
SRSF1-204ENST00000581979 BLIDQ8IZY5 108 aa14.37□□□□□ -0.11
SRSF1-204ENST00000581979 MB21D1Q8N884 522 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms