RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 TMCO4Q5TGY1 634 aa7.82□□□□□ -1.16
SMCHD1-207ENST00000581711 FIBCD1Q8N539 461 aa7.82□□□□□ -1.16
SMCHD1-207ENST00000581711 RGS22Q8NE09 1264 aa7.82□□□□□ -1.16
SMCHD1-207ENST00000581711 CPA5Q8WXQ8 436 aa7.82□□□□□ -1.16
SMCHD1-207ENST00000581711 SORCS2Q96PQ0 1159 aa7.82□□□□□ -1.16
SMCHD1-207ENST00000581711 GP6Q9HCN6 339 aa7.82□□□□□ -1.16
SMCHD1-207ENST00000581711 FHOD1Q9Y613 1164 aa7.82□□□□□ -1.16
SMCHD1-207ENST00000581711 IFNGR1P15260 489 aa7.81□□□□□ -1.16
SMCHD1-207ENST00000581711 ITGAEP38570 1179 aa7.81□□□□□ -1.16
SMCHD1-207ENST00000581711 TBC1D10BQ4KMP7 808 aaPredicted RBP7.81□□□□□ -1.16
SMCHD1-207ENST00000581711 ANKRD39Q53RE8 183 aa7.81□□□□□ -1.16
SMCHD1-207ENST00000581711 INTS3Q68E01 1043 aaKnown RBP7.81□□□□□ -1.16
SMCHD1-207ENST00000581711 TTLL7Q6ZT98 887 aa7.81□□□□□ -1.16
SMCHD1-207ENST00000581711 PPFIBP1Q86W92 1011 aa7.81□□□□□ -1.16
SMCHD1-207ENST00000581711 ADAMTS17Q8TE56 1095 aa7.81□□□□□ -1.16
SMCHD1-207ENST00000581711 SMARCC1Q92922 1105 aaPredicted RBP7.81□□□□□ -1.16
SMCHD1-207ENST00000581711 ZBTB8AQ96BR9 441 aa7.81□□□□□ -1.16
SMCHD1-207ENST00000581711 CD3EP07766 207 aa7.8□□□□□ -1.16
SMCHD1-207ENST00000581711 CACNB2Q08289 660 aaPredicted RBP7.8□□□□□ -1.16
SMCHD1-207ENST00000581711 AXDND1Q5T1B0 1012 aaPredicted RBP7.8□□□□□ -1.16
SMCHD1-207ENST00000581711 CABP7Q86V35 215 aa7.8□□□□□ -1.16
SMCHD1-207ENST00000581711 SLITRK4Q8IW52 837 aa7.8□□□□□ -1.16
SMCHD1-207ENST00000581711 FBLN5Q9UBX5 448 aa7.8□□□□□ -1.16
SMCHD1-207ENST00000581711 NKD1Q969G9 470 aa7.79□□□□□ -1.16
SMCHD1-207ENST00000581711 SCAND2PQ9GZW5 306 aaPredicted RBP7.79□□□□□ -1.16
SMCHD1-207ENST00000581711 SF3B6Q9Y3B4 125 aaKnown RBP7.79□□□□□ -1.16
SMCHD1-207ENST00000581711 OVOL3O00110 214 aa7.78□□□□□ -1.16
SMCHD1-207ENST00000581711 C6P13671 934 aa7.78□□□□□ -1.16
SMCHD1-207ENST00000581711 MFAP1P55081 439 aaKnown RBP7.78□□□□□ -1.16
SMCHD1-207ENST00000581711 SMAD4Q13485 552 aaKnown RBP7.78□□□□□ -1.16
SMCHD1-207ENST00000581711 SLC9A5Q14940 896 aa7.78□□□□□ -1.16
SMCHD1-207ENST00000581711 PEX11GQ96HA9 241 aa7.78□□□□□ -1.16
SMCHD1-207ENST00000581711 GGT7Q9UJ14 662 aa7.78□□□□□ -1.16
SMCHD1-207ENST00000581711 CD247P20963 164 aa7.77□□□□□ -1.17
SMCHD1-207ENST00000581711 POU4F1Q01851 419 aa7.77□□□□□ -1.17
SMCHD1-207ENST00000581711 LZTR1Q8N653 840 aa7.77□□□□□ -1.17
SMCHD1-207ENST00000581711 LINC00482Q8N8I6 264 aa7.77□□□□□ -1.17
SMCHD1-207ENST00000581711 NETO2Q8NC67 525 aa7.77□□□□□ -1.17
SMCHD1-207ENST00000581711 NT5C1AQ9BXI3 368 aa7.77□□□□□ -1.17
SMCHD1-207ENST00000581711 NOL6Q9H6R4 1146 aaKnown RBP7.77□□□□□ -1.17
SMCHD1-207ENST00000581711 NUDT5Q9UKK9 219 aa7.77□□□□□ -1.17
SMCHD1-207ENST00000581711 RWDD3Q9Y3V2 267 aa7.77□□□□□ -1.17
SMCHD1-207ENST00000581711 SMARCA5O60264 1052 aaPredicted RBP7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 TACR2P21452 398 aa7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 HMGA2P52926 109 aa7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 RGL3Q3MIN7 710 aa7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 HS2ST1Q7LGA3 356 aa7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 CHST13Q8NET6 341 aa7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 DVL3Q92997 716 aaPredicted RBP7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 DDX11Q96FC9 970 aa7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 ZDHHC15Q96MV8 337 aa7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 FAM86C1Q9NVL1 165 aa7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 ZNRF3Q9ULT6 936 aa7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 ZNF451Q9Y4E5 1061 aa7.76□□□□□ -1.17
SMCHD1-207ENST00000581711 TP53P04637 393 aaPredicted RBP7.75□□□□□ -1.17
SMCHD1-207ENST00000581711 ITGA4P13612 1032 aa7.75□□□□□ -1.17
SMCHD1-207ENST00000581711 RCSD1Q6JBY9 416 aa7.75□□□□□ -1.17
SMCHD1-207ENST00000581711 TAB3Q8N5C8 712 aaPredicted RBP7.75□□□□□ -1.17
SMCHD1-207ENST00000581711 SSBP3Q9BWW4 388 aaPredicted RBP7.75□□□□□ -1.17
SMCHD1-207ENST00000581711 INVSQ9Y283 1065 aa7.75□□□□□ -1.17
SMCHD1-207ENST00000581711 ZBTB7AO95365 584 aa7.74□□□□□ -1.17
SMCHD1-207ENST00000581711 CYP2C8P10632 490 aa7.74□□□□□ -1.17
SMCHD1-207ENST00000581711 GDF5P43026 501 aa7.74□□□□□ -1.17
SMCHD1-207ENST00000581711 EEF1DP3Q658K8 133 aa7.74□□□□□ -1.17
SMCHD1-207ENST00000581711 LGI4Q8N135 537 aa7.74□□□□□ -1.17
SMCHD1-207ENST00000581711 GORASP1Q9BQQ3 440 aa7.74□□□□□ -1.17
SMCHD1-207ENST00000581711 SLPIP03973 132 aa7.73□□□□□ -1.17
SMCHD1-207ENST00000581711 C8BP07358 591 aa7.73□□□□□ -1.17
SMCHD1-207ENST00000581711 KIAA2012Q0VF49 1180 aa7.73□□□□□ -1.17
SMCHD1-207ENST00000581711 SPRED1Q7Z699 444 aa7.73□□□□□ -1.17
SMCHD1-207ENST00000581711 Q8N1X5 172 aa7.73□□□□□ -1.17
SMCHD1-207ENST00000581711 MTA3Q9BTC8 594 aa7.73□□□□□ -1.17
SMCHD1-207ENST00000581711 ST6GALNAC2Q9UJ37 374 aa7.73□□□□□ -1.17
SMCHD1-207ENST00000581711 PPP1R11O60927 126 aaPredicted RBP7.72□□□□□ -1.17
SMCHD1-207ENST00000581711 RPL13P26373 211 aaKnown RBP7.72□□□□□ -1.17
SMCHD1-207ENST00000581711 THBS2P35442 1172 aa7.72□□□□□ -1.17
SMCHD1-207ENST00000581711 ZYXQ15942 572 aaKnown RBP7.72□□□□□ -1.17
SMCHD1-207ENST00000581711 FAM26FQ5R3K3 315 aa7.72□□□□□ -1.17
SMCHD1-207ENST00000581711 SH3RF3Q8TEJ3 882 aaPredicted RBP7.72□□□□□ -1.17
SMCHD1-207ENST00000581711 TM9SF2Q99805 663 aa7.72□□□□□ -1.17
SMCHD1-207ENST00000581711 MCMBPQ9BTE3 642 aa7.72□□□□□ -1.17
SMCHD1-207ENST00000581711 A0A087WZG4 1122 aa7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 IMPDH2P12268 514 aa7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 PPP2R5DQ14738 602 aa7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 WWC2Q6AWC2 1192 aa7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 BORAQ6PGQ7 559 aa7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 GLB1LQ6UWU2 654 aa7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 FAM124AQ86V42 546 aa7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 C11orf84Q9BUA3 381 aaPredicted RBP7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 MRIQ9BWK5 157 aa7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 GULP1Q9UBP9 304 aa7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 DIS3Q9Y2L1 958 aaKnown RBP7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 ZNF536O15090 1300 aa7.71□□□□□ -1.18
SMCHD1-207ENST00000581711 MROH6A6NGR9 719 aa7.7□□□□□ -1.18
SMCHD1-207ENST00000581711 STXBP3O00186 592 aa7.7□□□□□ -1.18
SMCHD1-207ENST00000581711 AURKAO14965 403 aa7.7□□□□□ -1.18
SMCHD1-207ENST00000581711 CBFA2T2O43439 604 aa7.7□□□□□ -1.18
SMCHD1-207ENST00000581711 CRIP3Q6Q6R5 217 aa7.7□□□□□ -1.18
SMCHD1-207ENST00000581711 UNC5AQ6ZN44 842 aa7.7□□□□□ -1.18
SMCHD1-207ENST00000581711 LIMS2Q7Z4I7 341 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms