RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 GMCL1P1Q8NEA9 526 aa16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 MKL1Q969V6 931 aa16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 MFSD14AQ96MC6 490 aa16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 RAD9AQ99638 391 aa16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 DDX49Q9Y6V7 483 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 ZFHX2Q9C0A1 2572 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 TECTAO75443 2155 aa16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 LCTP09848 1927 aa16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 MYH4Q9Y623 1939 aa16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 LINC01553A4QN01 128 aa16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 GJB5O95377 273 aa16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 COL19A1Q14993 1142 aa16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 NBPF20Q3BBV1 942 aa16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 PHOX2BQ99453 314 aa16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 C1orf115Q9H7X2 142 aa16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 ARPP21Q9UBL0 812 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 MTUS1Q9ULD2 1270 aa16.57■□□□□ 0.24
CSNK1D-219ENST00000581660 DEFB103AP81534 67 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 FOXK2Q01167 660 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 GPNMBQ14956 572 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 SLFNL1Q499Z3 407 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 KIAA1211Q6ZU35 1233 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 EEPD1Q7L9B9 569 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 TMCO2Q7Z6W1 182 aaPredicted RBP16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 AFAP1L1Q8TED9 768 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 ANKS1AQ92625 1134 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 DNAJC2Q99543 621 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 ZBED2Q9BTP6 218 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 CYP39A1Q9NYL5 469 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 CLIP2Q9UDT6 1046 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 FAM50BQ9Y247 325 aa16.56■□□□□ 0.24
CSNK1D-219ENST00000581660 RBM47A0AV96 593 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-219ENST00000581660 CXCL10P02778 98 aa16.55■□□□□ 0.24
CSNK1D-219ENST00000581660 MYL3P08590 195 aa16.55■□□□□ 0.24
CSNK1D-219ENST00000581660 SBK1Q52WX2 424 aa16.55■□□□□ 0.24
CSNK1D-219ENST00000581660 FAM47CQ5HY64 1035 aa16.55■□□□□ 0.24
CSNK1D-219ENST00000581660 CNKSR3Q6P9H4 555 aa16.55■□□□□ 0.24
CSNK1D-219ENST00000581660 ADHFE1Q8IWW8 467 aa16.55■□□□□ 0.24
CSNK1D-219ENST00000581660 CAGE1Q8TC20 777 aa16.55■□□□□ 0.24
CSNK1D-219ENST00000581660 TRERF1Q96PN7 1200 aa16.55■□□□□ 0.24
CSNK1D-219ENST00000581660 SLC4A4Q9Y6R1 1079 aa16.55■□□□□ 0.24
CSNK1D-219ENST00000581660 LOC102724159A0A0B4J2E5 919 aa16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 H3BQ06 376 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 KPNA6O60684 536 aa16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 PARNO95453 639 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 BMP3P12645 472 aa16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 RBL2Q08999 1139 aa16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 PWP2Q15269 919 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 UBE3CQ15386 1083 aa16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 CCDC155Q8N6L0 562 aa16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 PRSS33Q8NF86 280 aa16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 FRAT1Q92837 279 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 MRPL38Q96DV4 380 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 CTAGE1Q96RT6 745 aa16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 WDR11Q9BZH6 1224 aa16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 UPF3BQ9BZI7 483 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 GPHNQ9NQX3 736 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 TRIP12Q14669 1992 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-219ENST00000581660 ABHD14A-ACY1A0A1B0GW23 586 aa16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 A6NJR5 290 aa16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 STAT2P52630 851 aa16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 PTPN5P54829 565 aa16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 TIGD5Q53EQ6 642 aa16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 BRDTQ58F21 947 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 HERC4Q5GLZ8 1057 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 PABPC5Q96DU9 382 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.53■□□□□ 0.245e-10■□□□□ 9.7
CSNK1D-219ENST00000581660 MKNK2Q9HBH9 465 aa16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 PAG1Q9NWQ8 432 aa16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 MTMR4Q9NYA4 1195 aa16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 CTNNA3Q9UI47 895 aa16.53■□□□□ 0.24
CSNK1D-219ENST00000581660 RAD50Q92878 1312 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 TMEM232C9JQI7 657 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 EFCAB14O75071 495 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 TTLL1O95922 423 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 SELPP16109 830 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 SLFN13Q68D06 897 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 BMP8AQ7Z5Y6 402 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 FAM160B2Q86V87 743 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 LRRC47Q8N1G4 583 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 FBXO22Q8NEZ5 403 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 OR6J1Q8NGC5 347 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 CEP95Q96GE4 821 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 IL1RAPL2Q9NP60 686 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 NOD1Q9Y239 953 aa16.52■□□□□ 0.24
CSNK1D-219ENST00000581660 PTPRZ1P23471 2315 aaPredicted RBP16.52■□□□□ 0.23
CSNK1D-219ENST00000581660 C5orf42Q9H799 3197 aa16.52■□□□□ 0.23
CSNK1D-219ENST00000581660 PLIN4Q96Q06 1357 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 MYH7P12883 1935 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 NKRFO15226 690 aaKnown RBP eCLIP16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 PLA2G6O60733 806 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 ALAS1P13196 640 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 IRS1P35568 1242 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 PTPROQ16827 1216 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 TCTN1Q2MV58 587 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 MUM1L1Q5H9M0 696 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 CEP85Q6P2H3 762 aa16.51■□□□□ 0.23
CSNK1D-219ENST00000581660 LRRC8DQ7L1W4 858 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms