RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 NOL9Q5SY16 702 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-206ENST00000581631 MTA3Q9BTC8 594 aa6.37□□□□□ -1.39
SMCHD1-206ENST00000581631 NOL6Q9H6R4 1146 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-206ENST00000581631 RXFP1Q9HBX9 757 aa6.37□□□□□ -1.39
SMCHD1-206ENST00000581631 FAN1Q9Y2M0 1017 aa6.37□□□□□ -1.39
SMCHD1-206ENST00000581631 SF3B6Q9Y3B4 125 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-206ENST00000581631 LTBP3Q9NS15 1303 aa6.36□□□□□ -1.39
SMCHD1-206ENST00000581631 A0A1W2PQJ5 194 aa6.36□□□□□ -1.39
SMCHD1-206ENST00000581631 TP53P04637 393 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-206ENST00000581631 ITGA4P13612 1032 aa6.36□□□□□ -1.39
SMCHD1-206ENST00000581631 GUCY2CP25092 1073 aa6.36□□□□□ -1.39
SMCHD1-206ENST00000581631 POU4F1Q01851 419 aa6.36□□□□□ -1.39
SMCHD1-206ENST00000581631 TRIM26Q12899 539 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-206ENST00000581631 RUFY4Q6ZNE9 571 aa6.36□□□□□ -1.39
SMCHD1-206ENST00000581631 ZNF761Q86XN6 746 aaPredicted RBP6.36□□□□□ -1.39
SMCHD1-206ENST00000581631 NETO2Q8NC67 525 aa6.36□□□□□ -1.39
SMCHD1-206ENST00000581631 SMARCC2Q8TAQ2 1214 aa6.36□□□□□ -1.39
SMCHD1-206ENST00000581631 C1QTNF3-AMACRE9PGA6 284 aa6.35□□□□□ -1.39
SMCHD1-206ENST00000581631 AURKAO14965 403 aa6.35□□□□□ -1.39
SMCHD1-206ENST00000581631 MATN3O15232 486 aa6.35□□□□□ -1.39
SMCHD1-206ENST00000581631 CACNB2Q08289 660 aaPredicted RBP6.35□□□□□ -1.39
SMCHD1-206ENST00000581631 CCDC27Q2M243 656 aa6.35□□□□□ -1.39
SMCHD1-206ENST00000581631 LINC00482Q8N8I6 264 aa6.35□□□□□ -1.39
SMCHD1-206ENST00000581631 ZDHHC15Q96MV8 337 aa6.35□□□□□ -1.39
SMCHD1-206ENST00000581631 GPR20Q99678 358 aa6.35□□□□□ -1.39
SMCHD1-206ENST00000581631 C1QTNF3Q9BXJ4 246 aa6.35□□□□□ -1.39
SMCHD1-206ENST00000581631 EEF1DP3Q658K8 133 aa6.34□□□□□ -1.39
SMCHD1-206ENST00000581631 DDX1Q92499 740 aaKnown RBP6.34□□□□□ -1.39
SMCHD1-206ENST00000581631 KLHL25Q9H0H3 589 aa6.34□□□□□ -1.39
SMCHD1-206ENST00000581631 DBR1Q9UK59 544 aaKnown RBP6.34□□□□□ -1.39
SMCHD1-206ENST00000581631 DIS3Q9Y2L1 958 aaKnown RBP6.34□□□□□ -1.39
SMCHD1-206ENST00000581631 AKAP8O43823 692 aaKnown RBP6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 SARSP49591 514 aaKnown RBP6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 GJA9P57773 515 aa6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 SLC9A5Q14940 896 aa6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 TTC9BQ8N6N2 239 aa6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 GIPC2Q8TF65 315 aa6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 SSBP3Q9BWW4 388 aaPredicted RBP6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 BCL2L13Q9BXK5 485 aa6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 FAM86C1Q9NVL1 165 aa6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 SMPD4Q9NXE4 827 aa6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 NTMQ9P121 344 aa6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 PALD1Q9ULE6 856 aa6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 PPT2Q9UMR5 302 aa6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 RWDD3Q9Y3V2 267 aa6.33□□□□□ -1.4
SMCHD1-206ENST00000581631 C8BP07358 591 aa6.32□□□□□ -1.4
SMCHD1-206ENST00000581631 LZTR1Q8N653 840 aa6.32□□□□□ -1.4
SMCHD1-206ENST00000581631 ADAMTS17Q8TE56 1095 aa6.32□□□□□ -1.4
SMCHD1-206ENST00000581631 PEX11GQ96HA9 241 aa6.32□□□□□ -1.4
SMCHD1-206ENST00000581631 FERD3LQ96RJ6 166 aa6.32□□□□□ -1.4
SMCHD1-206ENST00000581631 HAUS7Q99871 368 aa6.32□□□□□ -1.4
SMCHD1-206ENST00000581631 WHRNQ9P202 907 aa6.32□□□□□ -1.4
SMCHD1-206ENST00000581631 ZXDAP98168 799 aa6.31□□□□□ -1.4
SMCHD1-206ENST00000581631 PPP2R5DQ14738 602 aa6.31□□□□□ -1.4
SMCHD1-206ENST00000581631 STXBP3O00186 592 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 VAMP4O75379 141 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 ZBTB7AO95365 584 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 PLATP00750 562 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 ZNF20P17024 532 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 FANCCQ00597 558 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 TCEAL1Q15170 157 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 TBC1D10BQ4KMP7 808 aaPredicted RBP6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 ZNF326Q5BKZ1 582 aaKnown RBP6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 CPZQ66K79 652 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 WWC2Q6AWC2 1192 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 CABP7Q86V35 215 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 ZNF513Q8N8E2 541 aaPredicted RBP6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 RGS22Q8NE09 1264 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 ZBTB8AQ96BR9 441 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 SAMD11Q96NU1 681 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 GORASP1Q9BQQ3 440 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 GULP1Q9UBP9 304 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 NUDT5Q9UKK9 219 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 BACE2Q9Y5Z0 518 aa6.3□□□□□ -1.4
SMCHD1-206ENST00000581631 THBS2P35442 1172 aa6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 ZNF394Q53GI3 561 aa6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 PRR31Q5SQ13 230 aa6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 USP48Q86UV5 1035 aa6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 ARHGEF39Q8N4T4 335 aa6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 TMEM87AQ8NBN3 555 aa6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 ADCY4Q8NFM4 1077 aa6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 KLHL6Q8WZ60 621 aa6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 DDX11Q96FC9 970 aa6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 SYT3Q9BQG1 590 aa6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 CGGBP1Q9UFW8 167 aaPredicted RBP6.29□□□□□ -1.4
SMCHD1-206ENST00000581631 RPL13P26373 211 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-206ENST00000581631 GRB10Q13322 594 aa6.28□□□□□ -1.4
SMCHD1-206ENST00000581631 SMAD4Q13485 552 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-206ENST00000581631 TTLL7Q6ZT98 887 aa6.28□□□□□ -1.4
SMCHD1-206ENST00000581631 CPNE8Q86YQ8 564 aa6.28□□□□□ -1.4
SMCHD1-206ENST00000581631 PLEKHO2Q8TD55 490 aa6.28□□□□□ -1.4
SMCHD1-206ENST00000581631 C11orf84Q9BUA3 381 aaPredicted RBP6.28□□□□□ -1.4
SMCHD1-206ENST00000581631 SIT1Q9Y3P8 196 aa6.28□□□□□ -1.4
SMCHD1-206ENST00000581631 PCDHGB7Q9Y5F8 929 aa6.28□□□□□ -1.4
SMCHD1-206ENST00000581631 C7orf72A4D263 438 aa6.27□□□□□ -1.41
SMCHD1-206ENST00000581631 C2orf71A6NGG8 1288 aa6.27□□□□□ -1.41
SMCHD1-206ENST00000581631 EPHX1P07099 455 aa6.27□□□□□ -1.41
SMCHD1-206ENST00000581631 PDIA4P13667 645 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-206ENST00000581631 ZNF76P36508 570 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms