RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 MAGEF1Q9HAY2 307 aa9.49□□□□□ -0.89
RIOK3-204ENST00000581220 SH3GLB2Q9NR46 395 aa9.49□□□□□ -0.89
RIOK3-204ENST00000581220 KBTBD4Q9NVX7 518 aa9.49□□□□□ -0.89
RIOK3-204ENST00000581220 PPP1R1BQ9UD71 204 aaPredicted RBP9.49□□□□□ -0.89
RIOK3-204ENST00000581220 PCDHA4Q9UN74 947 aa9.49□□□□□ -0.89
RIOK3-204ENST00000581220 PCDHA13Q9Y5I0 950 aa9.49□□□□□ -0.89
RIOK3-204ENST00000581220 USP17L12C9JPN9 530 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 USP17L21D6R901 530 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 IL6STP40189 918 aaPredicted RBP9.48□□□□□ -0.89
RIOK3-204ENST00000581220 PDE4DQ08499 809 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 SUSD4Q5VX71 490 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 EMBQ6PCB8 327 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 ZNF572Q7Z3I7 529 aaPredicted RBP9.48□□□□□ -0.89
RIOK3-204ENST00000581220 DEFB132Q7Z7B7 95 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 SUGP1Q8IWZ8 645 aaKnown RBP9.48□□□□□ -0.89
RIOK3-204ENST00000581220 TNS4Q8IZW8 715 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 DRC1Q96MC2 740 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 ERGIC2Q96RQ1 377 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 SH2D4AQ9H788 454 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 HYOU1Q9Y4L1 999 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 KAT6BQ8WYB5 2073 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 RASSF10A6NK89 507 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 PP2D1A8MPX8 630 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 LAD1O00515 517 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 ORC4O43929 436 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 LIG3P49916 1009 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 CCDC178Q5BJE1 867 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 FAM47AQ5JRC9 791 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 ANKRD40Q6AI12 368 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 CERS3Q8IU89 383 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 SMCR8Q8TEV9 937 aaPredicted RBP9.48□□□□□ -0.89
RIOK3-204ENST00000581220 RRP36Q96EU6 259 aaKnown RBP9.48□□□□□ -0.89
RIOK3-204ENST00000581220 OSBPL9Q96SU4 736 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 SH3GL2Q99962 352 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 TCP11L1Q9NUJ3 509 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 STIM2Q9P246 746 aa9.48□□□□□ -0.89
RIOK3-204ENST00000581220 DMGDHQ9UI17 866 aaKnown RBP9.48□□□□□ -0.89
RIOK3-204ENST00000581220 TSPY2A6NKD2 308 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 AKR1B10O60218 316 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 NMT2O60551 498 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 MOCS3O95396 460 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 EPB41P11171 864 aaKnown RBP9.47□□□□□ -0.89
RIOK3-204ENST00000581220 INPP5BP32019 993 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 USP8P40818 1118 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 ASIC1P78348 528 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 AMPD3Q01432 767 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 SLC7A5Q01650 507 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 CAVIN4Q5BKX8 364 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 TYW1BQ6NUM6 668 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 B4GALNT4Q76KP1 1039 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 KRT26Q7Z3Y9 468 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 C2CD5Q86YS7 1000 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 HDAC7Q8WUI4 952 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 EEF2KMTQ96G04 330 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 PLAGL2Q9UPG8 496 aa9.47□□□□□ -0.89
RIOK3-204ENST00000581220 ADAMTS3O15072 1205 aa9.46□□□□□ -0.89
RIOK3-204ENST00000581220 VEGFAP15692 232 aaPredicted RBP9.46□□□□□ -0.89
RIOK3-204ENST00000581220 GYG1P46976 350 aa9.46□□□□□ -0.89
RIOK3-204ENST00000581220 KIF11P52732 1056 aa9.46□□□□□ -0.89
RIOK3-204ENST00000581220 EZH2Q15910 746 aaKnown RBP9.46□□□□□ -0.89
RIOK3-204ENST00000581220 GLE1Q53GS7 698 aaKnown RBP9.46□□□□□ -0.89
RIOK3-204ENST00000581220 C8orf74Q6P047 294 aa9.46□□□□□ -0.89
RIOK3-204ENST00000581220 CABP7Q86V35 215 aa9.46□□□□□ -0.89
RIOK3-204ENST00000581220 ZSCAN29Q8IWY8 852 aaPredicted RBP9.46□□□□□ -0.89
RIOK3-204ENST00000581220 RASGRP4Q8TDF6 673 aa9.46□□□□□ -0.89
RIOK3-204ENST00000581220 GPKOWQ92917 476 aaPredicted RBP eCLIP9.46□□□□□ -0.89
RIOK3-204ENST00000581220 MLXIPQ9HAP2 919 aa9.46□□□□□ -0.89
RIOK3-204ENST00000581220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.46□□□□□ -0.89
RIOK3-204ENST00000581220 CAPN6Q9Y6Q1 641 aa9.46□□□□□ -0.89
RIOK3-204ENST00000581220 FAM205AQ6ZU69 1335 aa9.46□□□□□ -0.89
RIOK3-204ENST00000581220 MYH10P35580 1976 aa9.46□□□□□ -0.89
RIOK3-204ENST00000581220 ZNF263O14978 683 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 KIAA0754O94854 1291 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 PLEKP08567 350 aaPredicted RBP9.46□□□□□ -0.9
RIOK3-204ENST00000581220 HNRNPH3P31942 346 aaKnown RBP9.46□□□□□ -0.9
RIOK3-204ENST00000581220 EIF4A3P38919 411 aaKnown RBP9.46□□□□□ -0.9
RIOK3-204ENST00000581220 PRPHP41219 470 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 MAGEA1P43355 309 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 SKOR1P84550 965 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 NNTQ13423 1086 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 INF2Q27J81 1249 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 PARP10Q53GL7 1025 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 MIIPQ5JXC2 388 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 MCTP2Q6DN12 878 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 GALNT17Q6IS24 598 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 CNNM4Q6P4Q7 775 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 NFRKBQ6P4R8 1299 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.46□□□□□ -0.9
RIOK3-204ENST00000581220 CCDC155Q8N6L0 562 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 CAVIN3Q969G5 261 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 AK8Q96MA6 479 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 CRNKL1Q9BZJ0 848 aaKnown RBP9.46□□□□□ -0.9
RIOK3-204ENST00000581220 TMEM60Q9H2L4 133 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 RABEP2Q9H5N1 569 aa9.46□□□□□ -0.9
RIOK3-204ENST00000581220 NDUFAB1O14561 156 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 FGFR1OPO95684 399 aaKnown RBP9.45□□□□□ -0.9
RIOK3-204ENST00000581220 PLCG1P19174 1290 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 TNFRSF8P28908 595 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 GNAQP50148 359 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 NAP1L1P55209 391 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms