RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 DPYDQ12882 1025 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 RRP12Q5JTH9 1297 aaKnown RBP9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 AKNAD1Q5T1N1 836 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 TBC1D10CQ8IV04 446 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 STK11IPQ8N1F8 1099 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 ZSCAN31Q96LW9 406 aaPredicted RBP9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 TCEANC2Q96MN5 208 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 TTC14Q96N46 770 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 KRT23Q9C075 422 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 TMEM39BQ9GZU3 492 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 CNNM2Q9H8M5 875 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 DCP1AQ9NPI6 582 aaPredicted RBP9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 USP40Q9NVE5 1235 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 MCM9Q9NXL9 1143 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 ARPP21Q9UBL0 812 aaPredicted RBP9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 GNEQ9Y223 722 aaKnown RBP9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 CSADQ9Y600 493 aa9.89□□□□□ -0.83
SUPT4H1-206ENST00000581204 NAV1Q8NEY1 1877 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 CDK5RAP2Q96SN8 1893 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 POLR3DP05423 398 aaPredicted RBP9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 COL6A1P12109 1028 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 FOSL2P15408 326 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 SKOR1P84550 965 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 PLA2G2CQ5R387 149 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 CTR9Q6PD62 1173 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 Q6ZUG5 572 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 MAPKAPK5Q8IW41 473 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 ZKSCAN4Q969J2 545 aaPredicted RBP9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 TMX3Q96JJ7 454 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 CDK15Q96Q40 435 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 MRIQ9BWK5 157 aa9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 ALDH8A1Q9H2A2 487 aaPredicted RBP9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 SLKQ9H2G2 1235 aaPredicted RBP9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 ZNF70Q9UC06 446 aaPredicted RBP9.88□□□□□ -0.83
SUPT4H1-206ENST00000581204 XIRP2A4UGR9 3374 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 CYP2D7A0A087X1C5 515 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 B4E1Z4 1266 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 PRC1O43663 620 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 RHBDL3P58872 404 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 PICALMQ13492 652 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 LRRC26Q2I0M4 334 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 SBK1Q52WX2 424 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 GPAT2Q6NUI2 795 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 CHST3Q7LGC8 479 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 MB21D2Q8IYB1 491 aaPredicted RBP9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 STAG1Q8WVM7 1258 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 ZDHHC15Q96MV8 337 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 LRRC2Q9BYS8 371 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 SH2B1Q9NRF2 756 aaPredicted RBP9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 SAP30BPQ9UHR5 308 aaKnown RBP9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 ANAPC4Q9UJX5 808 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 OGDHLQ9ULD0 1010 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 NAP1L2Q9ULW6 460 aaPredicted RBP9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 KCNH4Q9UQ05 1017 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 MYH1P12882 1939 aa9.87□□□□□ -0.83
SUPT4H1-206ENST00000581204 NEDD4P46934 1319 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 CARNS1A5YM72 827 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 CYP2C8P10632 490 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 CYP2D6P10635 497 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 PCP11498 1178 aaKnown RBP9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 EXOSC10Q01780 885 aaKnown RBP9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 PDE4BQ07343 736 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 TNFAIP1Q13829 316 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 SART3Q15020 963 aaKnown RBP9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 INTS6LQ5JSJ4 861 aaKnown RBP9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 APOBEC3HQ6NTF7 200 aaKnown RBP9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 CDC42EP5Q6NZY7 148 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 ESR2Q92731 530 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 BRF1Q92994 677 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 INCENPQ9NQS7 918 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 MTMR7Q9Y216 660 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 IVNS1ABPQ9Y6Y0 642 aa9.86□□□□□ -0.83
SUPT4H1-206ENST00000581204 FLT1P17948 1338 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 WDR19Q8NEZ3 1342 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 FOCADQ5VW36 1801 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 ERICH2A1L162 156 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 RANBP6O60518 1105 aaKnown RBP9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 PPATQ06203 517 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 COL9A3Q14050 684 aaPredicted RBP9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 TOB2Q14106 344 aaPredicted RBP9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 C12orf60Q5U649 245 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 CYB5R4Q7L1T6 521 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 TPCN2Q8NHX9 752 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 TMEM87BQ96K49 555 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 WRNIP1Q96S55 665 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 PARK7Q99497 189 aaKnown RBP9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 UBAC1Q9BSL1 405 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 TDRD3Q9H7E2 651 aaKnown RBP9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 ZNF287Q9HBT7 754 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 TMOD2Q9NZR1 351 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 TPCN1Q9ULQ1 816 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 PCDHGA11Q9Y5H2 935 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 REV3LO60673 3130 aa9.85□□□□□ -0.83
SUPT4H1-206ENST00000581204 TCP10L2B9ZVM9 353 aa9.84□□□□□ -0.83
SUPT4H1-206ENST00000581204 M0R2N6 131 aa9.84□□□□□ -0.83
SUPT4H1-206ENST00000581204 IFIT3O14879 490 aaKnown RBP9.84□□□□□ -0.83
SUPT4H1-206ENST00000581204 APOBRQ0VD83 1088 aa9.84□□□□□ -0.83
SUPT4H1-206ENST00000581204 STK3Q13188 491 aa9.84□□□□□ -0.83
SUPT4H1-206ENST00000581204 ME3Q16798 604 aa9.84□□□□□ -0.83
SUPT4H1-206ENST00000581204 TMEM67Q5HYA8 995 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms