RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 TTC28Q96AY4 2481 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 ZMYM6O95789 1325 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 RAD50Q92878 1312 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 RBM47A0AV96 593 aaKnown RBP12.12□□□□□ -0.47
GGA3-210ENST00000580799 ALDH5A1P51649 535 aaPredicted RBP12.12□□□□□ -0.47
GGA3-210ENST00000580799 CCL23P55773 120 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 PSMC6P62333 389 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 PURAQ00577 322 aaKnown RBP12.12□□□□□ -0.47
GGA3-210ENST00000580799 BAATQ14032 418 aaPredicted RBP12.12□□□□□ -0.47
GGA3-210ENST00000580799 BRDTQ58F21 947 aaPredicted RBP12.12□□□□□ -0.47
GGA3-210ENST00000580799 VPS53Q5VIR6 699 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 SYDE2Q5VT97 1194 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 RASGRP2Q7LDG7 609 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 PPM1EQ8WY54 764 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 ASB2Q96Q27 587 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 WDR11Q9BZH6 1224 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 NKX2-4Q9H2Z4 354 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 INCENPQ9NQS7 918 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 TCP11L1Q9NUJ3 509 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 MTMR7Q9Y216 660 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 PCDHA11Q9Y5I1 949 aa12.12□□□□□ -0.47
GGA3-210ENST00000580799 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
GGA3-210ENST00000580799 PTPDC1A2A3K4 754 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 NFIBO00712 420 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
GGA3-210ENST00000580799 KPNA6O60684 536 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 PCP11498 1178 aaKnown RBP12.11□□□□□ -0.47
GGA3-210ENST00000580799 IGFBP4P22692 258 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 PTGS1P23219 599 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 SLC16A2P36021 539 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 MRPS5P82675 430 aaKnown RBP12.11□□□□□ -0.47
GGA3-210ENST00000580799 ADGRE1Q14246 886 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 TMEM63BQ5T3F8 832 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 TTBK2Q6IQ55 1244 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 TTC14Q96N46 770 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
GGA3-210ENST00000580799 TMEM47Q9BQJ4 181 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 MTG1Q9BT17 334 aaPredicted RBP12.11□□□□□ -0.47
GGA3-210ENST00000580799 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
GGA3-210ENST00000580799 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
GGA3-210ENST00000580799 TOMM22Q9NS69 142 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 YBX2Q9Y2T7 364 aaKnown RBP12.11□□□□□ -0.47
GGA3-210ENST00000580799 TNKSO95271 1327 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 WDR19Q8NEZ3 1342 aa12.11□□□□□ -0.47
GGA3-210ENST00000580799 B4DLN1 442 aa12.1□□□□□ -0.47
GGA3-210ENST00000580799 FGAP02671 866 aa12.1□□□□□ -0.47
GGA3-210ENST00000580799 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
GGA3-210ENST00000580799 RFC2P35250 354 aa12.1□□□□□ -0.47
GGA3-210ENST00000580799 MRPL12P52815 198 aaKnown RBP12.1□□□□□ -0.47
GGA3-210ENST00000580799 PDE4DQ08499 809 aa12.1□□□□□ -0.47
GGA3-210ENST00000580799 PPP2R5BQ15173 497 aa12.1□□□□□ -0.47
GGA3-210ENST00000580799 RNF207Q6ZRF8 634 aa12.1□□□□□ -0.47
GGA3-210ENST00000580799 DNERQ8NFT8 737 aa12.1□□□□□ -0.47
GGA3-210ENST00000580799 SCFD2Q8WU76 684 aa12.1□□□□□ -0.47
GGA3-210ENST00000580799 MAF1Q9H063 256 aa12.1□□□□□ -0.47
GGA3-210ENST00000580799 GPCPD1Q9NPB8 672 aa12.1□□□□□ -0.47
GGA3-210ENST00000580799 TANC1Q9C0D5 1861 aa12.1□□□□□ -0.47
GGA3-210ENST00000580799 A6NJR5 290 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 ZBBXA8MT70 800 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 MYL3P08590 195 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 PDHBP11177 359 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 ACTN1P12814 892 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 EDNRBP24530 442 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 CALML3P27482 149 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 PDE1AP54750 535 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 PTPN11Q06124 597 aaPredicted RBP12.09□□□□□ -0.47
GGA3-210ENST00000580799 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 RRP12Q5JTH9 1297 aaKnown RBP12.09□□□□□ -0.47
GGA3-210ENST00000580799 ANKRD45Q5TZF3 282 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 NFRKBQ6P4R8 1299 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 SLC30A10Q6XR72 485 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 IL27Q8NEV9 243 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 OR6J1Q8NGC5 347 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 ADAMTS19Q8TE59 1207 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 CLEC4DQ8WXI8 215 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 VWCEQ96DN2 955 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 SCLYQ96I15 445 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 TRMT13Q9NUP7 481 aaKnown RBP12.09□□□□□ -0.47
GGA3-210ENST00000580799 FRMPD2Q68DX3 1309 aaPredicted RBP12.09□□□□□ -0.47
GGA3-210ENST00000580799 SCN10AQ9Y5Y9 1956 aa12.09□□□□□ -0.47
GGA3-210ENST00000580799 SNHG28P0DPA3 235 aa12.08□□□□□ -0.48
GGA3-210ENST00000580799 CYP2C9P11712 490 aa12.08□□□□□ -0.48
GGA3-210ENST00000580799 NT5C2P49902 561 aa12.08□□□□□ -0.48
GGA3-210ENST00000580799 RABGGTBP53611 331 aa12.08□□□□□ -0.48
GGA3-210ENST00000580799 RPS6P62753 249 aaKnown RBP12.08□□□□□ -0.48
GGA3-210ENST00000580799 ZNF543Q08ER8 600 aa12.08□□□□□ -0.48
GGA3-210ENST00000580799 CCDC85BQ15834 202 aaPredicted RBP12.08□□□□□ -0.48
GGA3-210ENST00000580799 NBPF20Q3BBV1 942 aa12.08□□□□□ -0.48
GGA3-210ENST00000580799 FAM47CQ5HY64 1035 aa12.08□□□□□ -0.48
GGA3-210ENST00000580799 TMEM67Q5HYA8 995 aa12.08□□□□□ -0.48
GGA3-210ENST00000580799 GPATCH4Q5T3I0 446 aaKnown RBP12.08□□□□□ -0.48
GGA3-210ENST00000580799 MFSD6Q6ZSS7 791 aa12.08□□□□□ -0.48
GGA3-210ENST00000580799 RGS22Q8NE09 1264 aa12.08□□□□□ -0.48
GGA3-210ENST00000580799 SLC9A7Q96T83 725 aa12.08□□□□□ -0.48
GGA3-210ENST00000580799 RNF41Q9H4P4 317 aaPredicted RBP12.08□□□□□ -0.48
GGA3-210ENST00000580799 A0A0D9SFI3 127 aa12.07□□□□□ -0.48
GGA3-210ENST00000580799 TXNP10599 105 aaKnown RBP12.07□□□□□ -0.48
GGA3-210ENST00000580799 HSPD1P10809 573 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms