RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 PPP1R1BQ9UD71 204 aaPredicted RBP7.12□□□□□ -1.27
PPP4R1-217ENST00000580583 STK17AQ9UEE5 414 aa7.12□□□□□ -1.27
PPP4R1-217ENST00000580583 DDX25Q9UHL0 483 aaKnown RBP7.12□□□□□ -1.27
PPP4R1-217ENST00000580583 PYCARDQ9ULZ3 195 aa7.12□□□□□ -1.27
PPP4R1-217ENST00000580583 CTNND2Q9UQB3 1225 aa7.12□□□□□ -1.27
PPP4R1-217ENST00000580583 BCS1LQ9Y276 419 aa7.12□□□□□ -1.27
PPP4R1-217ENST00000580583 TMX2Q9Y320 296 aa7.12□□□□□ -1.27
PPP4R1-217ENST00000580583 RBBP6Q7Z6E9 1792 aaKnown RBP7.12□□□□□ -1.27
PPP4R1-217ENST00000580583 DOCK1Q14185 1865 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 NRDCO43847 1150 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 RPN1P04843 607 aaKnown RBP7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 ASNSP08243 561 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 ZNF18P17022 549 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 CASP1P29466 404 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 CDC25AP30304 524 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 GMPSP49915 693 aaPredicted RBP7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 RASSF7Q02833 373 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 LRMPQ12912 555 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 PAK1Q13153 545 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 SEMA3FQ13275 785 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 KCNB1Q14721 858 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 NBPF9Q3BBW0 867 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 NAALADL2Q58DX5 795 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 FAM83BQ5T0W9 1011 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 ZNF658Q5TYW1 1059 aaPredicted RBP7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 KLHL10Q6JEL2 608 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 POTEGQ6S5H5 508 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 MOXD1Q6UVY6 613 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 FILIP1Q7Z7B0 1213 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 FAM160B2Q86V87 743 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 CDAN1Q8IWY9 1227 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 SPICE1Q8N0Z3 855 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 STAMQ92783 540 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 CCDC47Q96A33 483 aaKnown RBP7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 CDK5RAP3Q96JB5 506 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 MTMR9Q96QG7 549 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 MTRQ99707 1265 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 GTPBP4Q9BZE4 634 aaKnown RBP7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 VCPKMTQ9H867 229 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 KBTBD4Q9NVX7 518 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 FANCLQ9NW38 375 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 LRWD1Q9UFC0 647 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 NRBP1Q9UHY1 535 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 PRR12Q9ULL5 1215 aa7.11□□□□□ -1.27
PPP4R1-217ENST00000580583 ZNF541Q9H0D2 1346 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 KDM3AQ9Y4C1 1321 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 SHTN1A0MZ66 631 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 SPDYE3A6NKU9 549 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 SLC26A4O43511 780 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 FOSP01100 380 aaPredicted RBP7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 CD44P16070 742 aaKnown RBP7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 SFPQP23246 707 aaKnown RBP eCLIP7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 SREBF1P36956 1147 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 CAP2P40123 477 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 TECP42680 631 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 TXKP42681 527 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 ECE1P42892 770 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 UBASH3AP57075 661 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 SPAG1Q07617 926 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 STIM1Q13586 685 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 USH1GQ495M9 461 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 TMEM119Q4V9L6 283 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 CDKAL1Q5VV42 579 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 SPATA1Q5VX52 437 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 VSTM4Q8IW00 320 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 LRRC8AQ8IWT6 810 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 MICALL2Q8IY33 904 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 SMYD4Q8IYR2 804 aaPredicted RBP7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 C17orf53Q8N3J3 647 aaPredicted RBP7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 ACER1Q8TDN7 264 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 SNX29Q8TEQ0 813 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 CACTINQ8WUQ7 758 aaKnown RBP7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 DPF2Q92785 391 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 MBOAT7Q96N66 472 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 FEZ1Q99689 392 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 GINM1Q9NU53 330 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 EXOC1Q9NV70 894 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 PGAP2Q9UHJ9 254 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 RWDD2AQ9UIY3 292 aa7.1□□□□□ -1.27
PPP4R1-217ENST00000580583 MYH7BA7E2Y1 1941 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 ABCB11O95342 1321 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 PPP1R3GB7ZBB8 358 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 USP17L15C9J2P7 530 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 USP17L13C9JLJ4 530 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 USP17L11C9JVI0 530 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 USP17L18D6R9N7 530 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 USP17L22D6RA61 530 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 USP17L17D6RBQ6 530 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 USP17L19D6RCP7 530 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 USP17L20D6RJB6 530 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 FZD9O00144 591 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 PIK3CDO00329 1044 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 MEIS2O14770 477 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 EDIL3O43854 480 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 MARCH6O60337 910 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 PLA2G6O60733 806 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 RHOBTB3O94955 611 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 PPP1R2P41236 205 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 PTGER2P43116 358 aa7.09□□□□□ -1.27
PPP4R1-217ENST00000580583 USP11P51784 963 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms