RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 TNMDQ9H2S6 317 aa11.25□□□□□ -0.61
SNX11-206ENST00000580219 TMOD2Q9NZR1 351 aa11.25□□□□□ -0.61
SNX11-206ENST00000580219 SERPINB13Q9UIV8 391 aa11.25□□□□□ -0.61
SNX11-206ENST00000580219 CLIC4Q9Y696 253 aa11.25□□□□□ -0.61
SNX11-206ENST00000580219 IGKV6D-41A0A0C4DH26 115 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 PALM3A6NDB9 673 aaPredicted RBP11.24□□□□□ -0.61
SNX11-206ENST00000580219 TLR2O60603 784 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 CAVIN2O95810 425 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 BMP15O95972 392 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 CCDC192P0DO97 292 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 SCG2P13521 617 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 CAPN2P17655 700 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 CMA1P23946 247 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 CALML3P27482 149 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 KRT2P35908 639 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 PSMC4P43686 418 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 MRPS5P82675 430 aaKnown RBP11.24□□□□□ -0.61
SNX11-206ENST00000580219 CEBPZQ03701 1054 aaKnown RBP11.24□□□□□ -0.61
SNX11-206ENST00000580219 CCDC173Q0VFZ6 552 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 NFIAQ12857 509 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 PTPAQ15257 358 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 ENGASEQ8NFI3 743 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 BRI3BPQ8WY22 251 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 PPM1EQ8WY54 764 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 TMEM47Q9BQJ4 181 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 FTOQ9C0B1 505 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNX11-206ENST00000580219 VEZTQ9HBM0 779 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 DDX4Q9NQI0 724 aaKnown RBP11.24□□□□□ -0.61
SNX11-206ENST00000580219 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 PCDHA7Q9UN72 937 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 CEP131Q9UPN4 1083 aa11.24□□□□□ -0.61
SNX11-206ENST00000580219 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
SNX11-206ENST00000580219 FAM237AA0A1B0GTK4 181 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 FAM86C2PA6NEL3 165 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 BTBD18B2RXH4 712 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 TCP10L2B9ZVM9 353 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 KINO60870 393 aaKnown RBP11.23□□□□□ -0.61
SNX11-206ENST00000580219 CUTAO60888 179 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 ENTPD3O75355 529 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 NR1I2O75469 434 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 HOXD10P28358 340 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 NHLH1Q02575 133 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 PICALMQ13492 652 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 FKBP1CQ5VVH2 108 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 GALNT17Q6IS24 598 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 CMTR1Q8N1G2 835 aaKnown RBP11.23□□□□□ -0.61
SNX11-206ENST00000580219 CCDC82Q8N4S0 544 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 FSIP1Q8NA03 581 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 PPP1R9BQ96SB3 815 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 SPZ1Q9BXG8 430 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 PANK2Q9BZ23 570 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 CRISPLD2Q9H0B8 497 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 MTMR4Q9NYA4 1195 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 MAD2L2Q9UI95 211 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 STX8Q9UNK0 236 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 ATRNL1Q5VV63 1379 aa11.23□□□□□ -0.61
SNX11-206ENST00000580219 CCL15-CCL14A0A0B4J2E2 113 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 PPP1R12BO60237 982 aaPredicted RBP11.22□□□□□ -0.61
SNX11-206ENST00000580219 MYH6P13533 1939 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 TRAPPC10P48553 1259 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 CCL15Q16663 113 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 AXDND1Q5T1B0 1012 aaPredicted RBP11.22□□□□□ -0.61
SNX11-206ENST00000580219 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 METTL16Q86W50 562 aaKnown RBP11.22□□□□□ -0.61
SNX11-206ENST00000580219 APOBEC3FQ8IUX4 373 aaKnown RBP11.22□□□□□ -0.61
SNX11-206ENST00000580219 FOXP4Q8IVH2 680 aaPredicted RBP11.22□□□□□ -0.61
SNX11-206ENST00000580219 FMR1NBQ8N0W7 255 aaPredicted RBP11.22□□□□□ -0.61
SNX11-206ENST00000580219 CCDC148Q8NFR7 591 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 OPTNQ96CV9 577 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 CEP95Q96GE4 821 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 C11orf16Q9NQ32 467 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 VPS54Q9P1Q0 977 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 PI4KBQ9UBF8 816 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 NOL7Q9UMY1 257 aaKnown RBP11.22□□□□□ -0.61
SNX11-206ENST00000580219 KCNJ14Q9UNX9 436 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 DCHS1Q96JQ0 3298 aa11.22□□□□□ -0.61
SNX11-206ENST00000580219 SIPA1L1O43166 1804 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 LTBP2Q14767 1821 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 ADGRA2Q96PE1 1338 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 hCG_1984214I3L0E3 225 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 GPR37L1O60883 481 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 TTLL1O95922 423 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 INHAP05111 366 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 PARP1P09874 1014 aaKnown RBP11.21□□□□□ -0.61
SNX11-206ENST00000580219 SNHG28P0DPA3 235 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 SHMT1P34896 483 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 TNNI2P48788 182 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 PRKCZQ05513 592 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 TCP10Q12799 353 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 SNW1Q13573 536 aaKnown RBP11.21□□□□□ -0.61
SNX11-206ENST00000580219 TNFAIP1Q13829 316 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 RASA3Q14644 834 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 ASPRV1Q53RT3 343 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 ZFPM1Q8IX07 1006 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 ZNF713Q8N859 430 aaPredicted RBP11.21□□□□□ -0.61
SNX11-206ENST00000580219 DAGLBQ8NCG7 672 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 FAM151AQ8WW52 585 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 TNFRSF25Q93038 417 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 TIGD1Q96MW7 591 aa11.21□□□□□ -0.61
SNX11-206ENST00000580219 GOLPH3LQ9H4A5 285 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms