RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 RIOK1Q9BRS2 568 aaKnown RBP16.69■□□□□ 0.26
ITGB4-206ENST00000579662 NACA2Q9H009 215 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 RCOR1Q9UKL0 485 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 SYDE2Q5VT97 1194 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 FAM160B2Q86V87 743 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 MASTLQ96GX5 879 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 USP17L3A6NCW0 530 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 USP17L4A6NCW7 530 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 PALM3A6NDB9 673 aaPredicted RBP16.68■□□□□ 0.26
ITGB4-206ENST00000579662 BRD3Q15059 726 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 USP17L1Q7RTZ2 530 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 CNOT6LQ96LI5 555 aaKnown RBP16.68■□□□□ 0.26
ITGB4-206ENST00000579662 PIGSQ96S52 555 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 SH3GLB2Q9NR46 395 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 STAM2O75886 525 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 STAT2P52630 851 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 POLR2FP61218 127 aaKnown RBP16.68■□□□□ 0.26
ITGB4-206ENST00000579662 ODR4Q5SWX8 454 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 PI16Q6UXB8 463 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 FOXP4Q8IVH2 680 aaPredicted RBP16.68■□□□□ 0.26
ITGB4-206ENST00000579662 LRRC8AQ8IWT6 810 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 LMTK2Q8IWU2 1503 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 C17orf53Q8N3J3 647 aaPredicted RBP16.68■□□□□ 0.26
ITGB4-206ENST00000579662 LINC00301Q8NCQ3 95 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 CCT6BQ92526 530 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 TCP1P17987 556 aaKnown RBP16.68■□□□□ 0.26
ITGB4-206ENST00000579662 BPIFB4P59827 614 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 KCTD1Q719H9 257 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 MICALL1Q8N3F8 863 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 PROCA1Q8NCQ7 364 aaPredicted RBP16.68■□□□□ 0.26
ITGB4-206ENST00000579662 ZFP91Q96JP5 570 aaPredicted RBP16.68■□□□□ 0.26
ITGB4-206ENST00000579662 PCDHA5Q9Y5H7 936 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 CD2APQ9Y5K6 639 aa16.68■□□□□ 0.26
ITGB4-206ENST00000579662 TMEM191BP0C7N4 346 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 FAM81BQ96LP2 452 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 SLFN14P0C7P3 912 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 ADRA2BP18089 450 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 ZNF658Q5TYW1 1059 aaPredicted RBP16.67■□□□□ 0.26
ITGB4-206ENST00000579662 RETREG2Q8NC44 543 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 TBCKQ8TEA7 893 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.67■□□□□ 0.26
ITGB4-206ENST00000579662 NARFQ9UHQ1 456 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 POLR2BP30876 1174 aaKnown RBP16.67■□□□□ 0.26
ITGB4-206ENST00000579662 ZSWIM5Q9P217 1185 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 SRP68Q9UHB9 627 aaKnown RBP16.67■□□□□ 0.26
ITGB4-206ENST00000579662 EXOC3L4Q17RC7 722 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 MIS18BP1Q6P0N0 1132 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 DGKHQ86XP1 1220 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 P3H4Q92791 437 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 PSDA5PKW4 1024 aaPredicted RBP16.67■□□□□ 0.26
ITGB4-206ENST00000579662 LPXNO60711 386 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 CRCPO75575 148 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 H2AFZP0C0S5 128 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 CCND2P30279 289 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 MYL7Q01449 175 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 H2AFVQ71UI9 128 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 SRGAP1Q7Z6B7 1085 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 NACC1Q96RE7 527 aa16.67■□□□□ 0.26
ITGB4-206ENST00000579662 WDR19Q8NEZ3 1342 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 PSMC4P43686 418 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 CYP4A11Q02928 519 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 STAG1Q8WVM7 1258 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 P2RX5Q93086 422 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 PSMB7Q99436 277 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 ABCA9Q8IUA7 1624 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 KIF11P52732 1056 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 MFAP3P55082 362 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 LACTBP83111 547 aaPredicted RBP16.66■□□□□ 0.26
ITGB4-206ENST00000579662 TBC1D31Q96DN5 1066 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 COL15A1P39059 1388 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 LRRIQ4A6NIV6 560 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 DENND2CQ68D51 928 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 TUBGCP2Q9BSJ2 902 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 CIB2O75838 187 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 ACCSQ96QU6 501 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 HESX1Q9UBX0 185 aa16.66■□□□□ 0.26
ITGB4-206ENST00000579662 ZHX1Q9UKY1 873 aaPredicted RBP16.66■□□□□ 0.26
ITGB4-206ENST00000579662 ABCA6Q8N139 1617 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 USP17L8P0C7I0 530 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 ABCB4P21439 1286 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 PSMC2P35998 433 aaKnown RBP16.65■□□□□ 0.26
ITGB4-206ENST00000579662 PPP1R2P3Q6NXS1 205 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 SND1Q7KZF4 910 aaKnown RBP eCLIP16.65■□□□□ 0.26
ITGB4-206ENST00000579662 SPICE1Q8N0Z3 855 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 HAUS1Q96CS2 278 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 STRBPQ96SI9 672 aaKnown RBP16.65■□□□□ 0.26
ITGB4-206ENST00000579662 SUGCTQ9HAC7 445 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 SRPRBQ9Y5M8 271 aaKnown RBP16.65■□□□□ 0.26
ITGB4-206ENST00000579662 ZNF500O60304 480 aaPredicted RBP16.65■□□□□ 0.26
ITGB4-206ENST00000579662 GDF11O95390 407 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 IGKV5-2P06315 115 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 MCAMP43121 646 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 PSMD2Q13200 908 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 NRKQ7Z2Y5 1582 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 LMNB1P20700 586 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 SARNPP82979 210 aaKnown RBP16.65■□□□□ 0.26
ITGB4-206ENST00000579662 HHATQ5VTY9 493 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 POMGNT1Q8WZA1 660 aa16.65■□□□□ 0.26
ITGB4-206ENST00000579662 TMEM206Q9H813 350 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms