RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 ANKRD1Q15327 319 aa11.61□□□□□ -0.55
MKS1-208ENST00000579358 ARMCX2Q7L311 632 aa11.61□□□□□ -0.55
MKS1-208ENST00000579358 TRPV1Q8NER1 839 aa11.61□□□□□ -0.55
MKS1-208ENST00000579358 MORC4Q8TE76 937 aa11.61□□□□□ -0.55
MKS1-208ENST00000579358 ZNF274Q96GC6 653 aaPredicted RBP11.61□□□□□ -0.55
MKS1-208ENST00000579358 CRISPLD2Q9H0B8 497 aa11.61□□□□□ -0.55
MKS1-208ENST00000579358 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.61□□□□□ -0.55
MKS1-208ENST00000579358 NAP1L2Q9ULW6 460 aaPredicted RBP11.61□□□□□ -0.55
MKS1-208ENST00000579358 CNPY2Q9Y2B0 182 aa11.61□□□□□ -0.55
MKS1-208ENST00000579358 ASTN1O14525 1302 aa11.6□□□□□ -0.55
MKS1-208ENST00000579358 hCG_1984214I3L0E3 225 aa11.6□□□□□ -0.55
MKS1-208ENST00000579358 SEPT4O43236 478 aa11.6□□□□□ -0.55
MKS1-208ENST00000579358 SNAI1O95863 264 aaPredicted RBP11.6□□□□□ -0.55
MKS1-208ENST00000579358 EN2P19622 333 aaPredicted RBP11.6□□□□□ -0.55
MKS1-208ENST00000579358 CALML3P27482 149 aa11.6□□□□□ -0.55
MKS1-208ENST00000579358 RBM25P49756 843 aaKnown RBP11.6□□□□□ -0.55
MKS1-208ENST00000579358 ALDH5A1P51649 535 aaPredicted RBP11.6□□□□□ -0.55
MKS1-208ENST00000579358 HSD17B4P51659 736 aa11.6□□□□□ -0.55
MKS1-208ENST00000579358 CMTR1Q8N1G2 835 aaKnown RBP11.6□□□□□ -0.55
MKS1-208ENST00000579358 ZNF713Q8N859 430 aaPredicted RBP11.6□□□□□ -0.55
MKS1-208ENST00000579358 SHISA4Q96DD7 197 aa11.6□□□□□ -0.55
MKS1-208ENST00000579358 DEFB118Q96PH6 123 aa11.6□□□□□ -0.55
MKS1-208ENST00000579358 MPHOSPH6Q99547 160 aaKnown RBP11.6□□□□□ -0.55
MKS1-208ENST00000579358 ABHD16BQ9H3Z7 469 aa11.6□□□□□ -0.55
MKS1-208ENST00000579358 UPF2Q9HAU5 1272 aaKnown RBP11.6□□□□□ -0.55
MKS1-208ENST00000579358 RBM27Q9P2N5 1060 aaKnown RBP11.6□□□□□ -0.55
MKS1-208ENST00000579358 DDX20Q9UHI6 824 aaKnown RBP11.6□□□□□ -0.55
MKS1-208ENST00000579358 RBBP6Q7Z6E9 1792 aaKnown RBP11.59□□□□□ -0.55
MKS1-208ENST00000579358 DOCK3Q8IZD9 2030 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 B4DLN1 442 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 CFBP00751 764 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 ZNF865P0CJ78 1059 aaPredicted RBP11.59□□□□□ -0.55
MKS1-208ENST00000579358 AKR1A1P14550 325 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 EDNRBP24530 442 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 ADD1P35611 737 aaKnown RBP11.59□□□□□ -0.55
MKS1-208ENST00000579358 MRPL12P52815 198 aaKnown RBP11.59□□□□□ -0.55
MKS1-208ENST00000579358 LHX8Q68G74 356 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 TEX2Q8IWB9 1127 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 CCDC82Q8N4S0 544 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 ANKLE1Q8NAG6 615 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 SYTL5Q8TDW5 730 aaPredicted RBP11.59□□□□□ -0.55
MKS1-208ENST00000579358 PIBF1Q8WXW3 757 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 C22orf23Q9BZE7 217 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 KATNBL1Q9H079 304 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 OGDHLQ9ULD0 1010 aa11.59□□□□□ -0.55
MKS1-208ENST00000579358 GCOM1H8Y6P7 765 aaPredicted RBP11.58□□□□□ -0.56
MKS1-208ENST00000579358 POLR2MP0CAP2 368 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 IFNAR1P17181 557 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 CNGA1P29973 690 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 AK2P54819 239 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 ACVR2BQ13705 512 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 PRAMEF19Q5SWL8 479 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 PPP1R18Q6NYC8 613 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 IL27Q8NEV9 243 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 NSUN6Q8TEA1 469 aaKnown RBP11.58□□□□□ -0.56
MKS1-208ENST00000579358 TBC1D5Q92609 795 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 PURBQ96QR8 312 aaKnown RBP11.58□□□□□ -0.56
MKS1-208ENST00000579358 RNF26Q9BY78 433 aaPredicted RBP11.58□□□□□ -0.56
MKS1-208ENST00000579358 VTA1Q9NP79 307 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 COL20A1Q9P218 1284 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 ZHX1Q9UKY1 873 aaPredicted RBP11.58□□□□□ -0.56
MKS1-208ENST00000579358 FAM184BQ9ULE4 1060 aa11.58□□□□□ -0.56
MKS1-208ENST00000579358 PIK3CDO00329 1044 aa11.57□□□□□ -0.56
MKS1-208ENST00000579358 TFRCP02786 760 aaKnown RBP11.57□□□□□ -0.56
MKS1-208ENST00000579358 RARBP10826 455 aa11.57□□□□□ -0.56
MKS1-208ENST00000579358 NEK4P51957 841 aa11.57□□□□□ -0.56
MKS1-208ENST00000579358 NTRK3Q16288 839 aa11.57□□□□□ -0.56
MKS1-208ENST00000579358 WWC2Q6AWC2 1192 aa11.57□□□□□ -0.56
MKS1-208ENST00000579358 HEATR3Q7Z4Q2 680 aa11.57□□□□□ -0.56
MKS1-208ENST00000579358 UBE2Q1Q7Z7E8 422 aa11.57□□□□□ -0.56
MKS1-208ENST00000579358 IWS1Q96ST2 819 aa11.57□□□□□ -0.56
MKS1-208ENST00000579358 V9GY48 417 aaPredicted RBP11.57□□□□□ -0.56
MKS1-208ENST00000579358 hCG_1642624A0A1W2PR95 340 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 CPLX1O14810 134 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 PRPF3O43395 683 aaKnown RBP11.56□□□□□ -0.56
MKS1-208ENST00000579358 FARP2O94887 1054 aaPredicted RBP11.56□□□□□ -0.56
MKS1-208ENST00000579358 SCG2P13521 617 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 CCT2P78371 535 aaKnown RBP11.56□□□□□ -0.56
MKS1-208ENST00000579358 AKAP17AQ02040 695 aaKnown RBP11.56□□□□□ -0.56
MKS1-208ENST00000579358 PDE4DQ08499 809 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 PFKFB3Q16875 520 aaPredicted RBP11.56□□□□□ -0.56
MKS1-208ENST00000579358 CPLX2Q6PUV4 134 aaKnown RBP11.56□□□□□ -0.56
MKS1-208ENST00000579358 CUL5Q93034 780 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 TAAR1Q96RJ0 339 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 RMDN3Q96TC7 470 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 KIF2CQ99661 725 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 SLKQ9H2G2 1235 aaPredicted RBP11.56□□□□□ -0.56
MKS1-208ENST00000579358 NCOA5Q9HCD5 579 aaKnown RBP11.56□□□□□ -0.56
MKS1-208ENST00000579358 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 BARHL2Q9NY43 387 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 TPCN1Q9ULQ1 816 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 FRMPD4Q14CM0 1322 aa11.56□□□□□ -0.56
MKS1-208ENST00000579358 RBM47A0AV96 593 aaKnown RBP11.55□□□□□ -0.56
MKS1-208ENST00000579358 STXBP3O00186 592 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 DNM1LO00429 736 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 MEIS2O14770 477 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 PFKFB2O60825 505 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 DUSP11O75319 330 aaKnown RBP11.55□□□□□ -0.56
MKS1-208ENST00000579358 CDKL5O76039 1030 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 HOXA13P31271 388 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms