RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 RPUSD2Q8IZ73 545 aaKnown RBP22.65■■□□□ 1.22
CDKN2A-213ENST00000579122 WNT8AQ9H1J5 351 aa22.65■■□□□ 1.22
CDKN2A-213ENST00000579122 TCP11L1Q9NUJ3 509 aa22.65■■□□□ 1.22
CDKN2A-213ENST00000579122 ZBTB47Q9UFB7 747 aaPredicted RBP22.65■■□□□ 1.22
CDKN2A-213ENST00000579122 SLC16A2P36021 539 aa22.64■■□□□ 1.21
CDKN2A-213ENST00000579122 OTOP2Q7RTS6 562 aa22.64■■□□□ 1.21
CDKN2A-213ENST00000579122 TICAM2Q86XR7 235 aa22.64■■□□□ 1.21
CDKN2A-213ENST00000579122 TMEM47Q9BQJ4 181 aa22.64■■□□□ 1.21
CDKN2A-213ENST00000579122 ALDH8A1Q9H2A2 487 aaPredicted RBP22.64■■□□□ 1.21
CDKN2A-213ENST00000579122 POLR3EQ9NVU0 708 aa22.64■■□□□ 1.21
CDKN2A-213ENST00000579122 CHD7Q9P2D1 2997 aa22.63■■□□□ 1.21
CDKN2A-213ENST00000579122 RBM47A0AV96 593 aaKnown RBP22.63■■□□□ 1.21
CDKN2A-213ENST00000579122 NFIBO00712 420 aa22.63■■□□□ 1.21
CDKN2A-213ENST00000579122 FGAP02671 866 aa22.63■■□□□ 1.21
CDKN2A-213ENST00000579122 ATXN2LQ8WWM7 1075 aaKnown RBP22.63■■□□□ 1.21
CDKN2A-213ENST00000579122 WDR11Q9BZH6 1224 aa22.63■■□□□ 1.21
CDKN2A-213ENST00000579122 NKX2-4Q9H2Z4 354 aa22.63■■□□□ 1.21
CDKN2A-213ENST00000579122 SLC28A3Q9HAS3 691 aa22.63■■□□□ 1.21
CDKN2A-213ENST00000579122 TOMM22Q9NS69 142 aa22.63■■□□□ 1.21
CDKN2A-213ENST00000579122 PNMA2Q9UL42 364 aa22.63■■□□□ 1.21
CDKN2A-213ENST00000579122 SUPT20HL2P0C7V6 817 aa22.62■■□□□ 1.21
CDKN2A-213ENST00000579122 CPT1AP50416 773 aa22.62■■□□□ 1.21
CDKN2A-213ENST00000579122 ADGRE1Q14246 886 aa22.62■■□□□ 1.21
CDKN2A-213ENST00000579122 ANKRD45Q5TZF3 282 aa22.62■■□□□ 1.21
CDKN2A-213ENST00000579122 PPM1EQ8WY54 764 aa22.62■■□□□ 1.21
CDKN2A-213ENST00000579122 GPCPD1Q9NPB8 672 aa22.62■■□□□ 1.21
CDKN2A-213ENST00000579122 YBX2Q9Y2T7 364 aaKnown RBP22.62■■□□□ 1.21
CDKN2A-213ENST00000579122 ZMYM6O95789 1325 aa22.61■■□□□ 1.21
CDKN2A-213ENST00000579122 FRMPD2Q68DX3 1309 aaPredicted RBP22.61■■□□□ 1.21
CDKN2A-213ENST00000579122 PTPDC1A2A3K4 754 aa22.61■■□□□ 1.21
CDKN2A-213ENST00000579122 PURAQ00577 322 aaKnown RBP22.61■■□□□ 1.21
CDKN2A-213ENST00000579122 MCMDC2Q4G0Z9 681 aa22.61■■□□□ 1.21
CDKN2A-213ENST00000579122 RRP12Q5JTH9 1297 aaKnown RBP22.61■■□□□ 1.21
CDKN2A-213ENST00000579122 SLC4A7Q9Y6M7 1214 aa22.61■■□□□ 1.21
CDKN2A-213ENST00000579122 PFKMP08237 780 aa22.6■■□□□ 1.21
CDKN2A-213ENST00000579122 PDHBP11177 359 aa22.6■■□□□ 1.21
CDKN2A-213ENST00000579122 PDE1AP54750 535 aa22.6■■□□□ 1.21
CDKN2A-213ENST00000579122 SLC30A10Q6XR72 485 aa22.6■■□□□ 1.21
CDKN2A-213ENST00000579122 CLEC4DQ8WXI8 215 aa22.6■■□□□ 1.21
CDKN2A-213ENST00000579122 VWCEQ96DN2 955 aa22.6■■□□□ 1.21
CDKN2A-213ENST00000579122 SCLYQ96I15 445 aa22.6■■□□□ 1.21
CDKN2A-213ENST00000579122 FAM227BQ96M60 508 aa22.6■■□□□ 1.21
CDKN2A-213ENST00000579122 TRMT13Q9NUP7 481 aaKnown RBP22.6■■□□□ 1.21
CDKN2A-213ENST00000579122 THEGQ9P2T0 379 aa22.6■■□□□ 1.21
CDKN2A-213ENST00000579122 TNKSO95271 1327 aa22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 A0A0D9SFI3 127 aa22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 TNFRSF10AO00220 468 aa22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 NKRFO15226 690 aaKnown RBP eCLIP22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 HSPD1P10809 573 aaKnown RBP22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 IGFBP4P22692 258 aa22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 CALML3P27482 149 aa22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 RNF207Q6ZRF8 634 aa22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 OR6J1Q8NGC5 347 aa22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 TTC14Q96N46 770 aa22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 MPHOSPH6Q99547 160 aaKnown RBP22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 MTG1Q9BT17 334 aaPredicted RBP22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 GPHNQ9NQX3 736 aaPredicted RBP22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 PCDHA11Q9Y5I1 949 aa22.59■■□□□ 1.21
CDKN2A-213ENST00000579122 WDR19Q8NEZ3 1342 aa22.58■■□□□ 1.21
CDKN2A-213ENST00000579122 MYL3P08590 195 aa22.58■■□□□ 1.21
CDKN2A-213ENST00000579122 PCP11498 1178 aaKnown RBP22.58■■□□□ 1.21
CDKN2A-213ENST00000579122 PDE4DQ08499 809 aa22.58■■□□□ 1.21
CDKN2A-213ENST00000579122 ZNF543Q08ER8 600 aa22.58■■□□□ 1.21
CDKN2A-213ENST00000579122 BRDTQ58F21 947 aaPredicted RBP22.58■■□□□ 1.21
CDKN2A-213ENST00000579122 DNERQ8NFT8 737 aa22.58■■□□□ 1.21
CDKN2A-213ENST00000579122 ASB2Q96Q27 587 aa22.58■■□□□ 1.21
CDKN2A-213ENST00000579122 GBF1Q92538 1859 aa22.58■■□□□ 1.2
CDKN2A-213ENST00000579122 RAD50Q92878 1312 aa22.57■■□□□ 1.2
CDKN2A-213ENST00000579122 ZBBXA8MT70 800 aa22.57■■□□□ 1.2
CDKN2A-213ENST00000579122 SNHG28P0DPA3 235 aa22.57■■□□□ 1.2
CDKN2A-213ENST00000579122 CYP2C9P11712 490 aa22.57■■□□□ 1.2
CDKN2A-213ENST00000579122 EDNRBP24530 442 aa22.57■■□□□ 1.2
CDKN2A-213ENST00000579122 RABGGTBP53611 331 aa22.57■■□□□ 1.2
CDKN2A-213ENST00000579122 RPS6P62753 249 aaKnown RBP22.57■■□□□ 1.2
CDKN2A-213ENST00000579122 PPP2R5BQ15173 497 aa22.57■■□□□ 1.2
CDKN2A-213ENST00000579122 XIRP2A4UGR9 3374 aa22.56■■□□□ 1.2
CDKN2A-213ENST00000579122 A6NJR5 290 aa22.56■■□□□ 1.2
CDKN2A-213ENST00000579122 KPNA6O60684 536 aa22.56■■□□□ 1.2
CDKN2A-213ENST00000579122 ATP2A2P16615 1042 aaKnown RBP22.56■■□□□ 1.2
CDKN2A-213ENST00000579122 MRPS5P82675 430 aaKnown RBP22.56■■□□□ 1.2
CDKN2A-213ENST00000579122 CCDC85BQ15834 202 aaPredicted RBP22.56■■□□□ 1.2
CDKN2A-213ENST00000579122 PPP2R2DQ66LE6 453 aa22.56■■□□□ 1.2
CDKN2A-213ENST00000579122 MFSD6Q6ZSS7 791 aa22.56■■□□□ 1.2
CDKN2A-213ENST00000579122 ZNF589Q86UQ0 364 aaPredicted RBP22.56■■□□□ 1.2
CDKN2A-213ENST00000579122 SCFD2Q8WU76 684 aa22.56■■□□□ 1.2
CDKN2A-213ENST00000579122 TRANK1O15050 2925 aa22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 B4DLN1 442 aa22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 RFC2P35250 354 aa22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 MRPL12P52815 198 aaKnown RBP22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 RRP1P56182 461 aaKnown RBP22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 HAND2P61296 217 aa22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 NMIQ13287 307 aaPredicted RBP22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 HDAC1Q13547 482 aaPredicted RBP22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 TTLL4Q14679 1199 aa22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 NBPF20Q3BBV1 942 aa22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 NFRKBQ6P4R8 1299 aa22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 RGS22Q8NE09 1264 aa22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 CCDC171Q6TFL3 1326 aa22.55■■□□□ 1.2
CDKN2A-213ENST00000579122 MYOGP15173 224 aa22.54■■□□□ 1.2
CDKN2A-213ENST00000579122 PTPN11Q06124 597 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms