RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 DUSP28Q4G0W2 176 aa10.38□□□□□ -0.75
BRIP1-204ENST00000579028 ZSCAN25Q6NSZ9 544 aa10.38□□□□□ -0.75
BRIP1-204ENST00000579028 FAM160B2Q86V87 743 aa10.38□□□□□ -0.75
BRIP1-204ENST00000579028 CEP95Q96GE4 821 aa10.38□□□□□ -0.75
BRIP1-204ENST00000579028 STRBPQ96SI9 672 aaKnown RBP10.38□□□□□ -0.75
BRIP1-204ENST00000579028 MTMR4Q9NYA4 1195 aa10.38□□□□□ -0.75
BRIP1-204ENST00000579028 DDX49Q9Y6V7 483 aaKnown RBP10.38□□□□□ -0.75
BRIP1-204ENST00000579028 REV3LO60673 3130 aa10.38□□□□□ -0.75
BRIP1-204ENST00000579028 PTPRSQ13332 1948 aa10.38□□□□□ -0.75
BRIP1-204ENST00000579028 PLIN4Q96Q06 1357 aa10.38□□□□□ -0.75
BRIP1-204ENST00000579028 TMEM232C9JQI7 657 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 BAIAP3O94812 1187 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 TTLL1O95922 423 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 IQCF3P0C7M6 154 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 STAT2P52630 851 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 SLFN13Q68D06 897 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 KIAA1211Q6ZU35 1233 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 EEPD1Q7L9B9 569 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 SPRED2Q7Z698 418 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 STK11IPQ8N1F8 1099 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 LRRC47Q8N1G4 583 aaKnown RBP10.37□□□□□ -0.75
BRIP1-204ENST00000579028 CHURC1Q8WUH1 139 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 TRERF1Q96PN7 1200 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 CYP39A1Q9NYL5 469 aa10.37□□□□□ -0.75
BRIP1-204ENST00000579028 LOC102724159A0A0B4J2E5 919 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 MINDY4BA8MYZ0 360 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 PLA2G6O60733 806 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 RAB11FIP3O75154 756 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 ALAS1P13196 640 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 CPT1AP50416 773 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 PWP2Q15269 919 aaKnown RBP10.36□□□□□ -0.75
BRIP1-204ENST00000579028 MUM1L1Q5H9M0 696 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 FAM178BQ8IXR5 827 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 ZNF444Q8N0Y2 327 aaPredicted RBP10.36□□□□□ -0.75
BRIP1-204ENST00000579028 RETREG2Q8NC44 543 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 STAG1Q8WVM7 1258 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 GMCL1Q96IK5 515 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 MTG1Q9BT17 334 aaPredicted RBP10.36□□□□□ -0.75
BRIP1-204ENST00000579028 ZNF287Q9HBT7 754 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 TET1Q8NFU7 2136 aa10.36□□□□□ -0.75
BRIP1-204ENST00000579028 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.35□□□□□ -0.75
BRIP1-204ENST00000579028 RBM47A0AV96 593 aaKnown RBP10.35□□□□□ -0.75
BRIP1-204ENST00000579028 LCHNA4D1U4 455 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 MYL3P08590 195 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 MRE11P49959 708 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 PTPN11Q06124 597 aaPredicted RBP10.35□□□□□ -0.75
BRIP1-204ENST00000579028 BFSP2Q13515 415 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 LRRFIP1Q32MZ4 808 aaKnown RBP10.35□□□□□ -0.75
BRIP1-204ENST00000579028 NBPF20Q3BBV1 942 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 LEXMQ3ZCV2 418 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 FAM47CQ5HY64 1035 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 NFRKBQ6P4R8 1299 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 GJD3Q8N144 294 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 NEDD1Q8NHV4 660 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 WDR11Q9BZH6 1224 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 FTOQ9C0B1 505 aaKnown RBP eCLIP10.35□□□□□ -0.75
BRIP1-204ENST00000579028 UBE2ZQ9H832 354 aaPredicted RBP10.35□□□□□ -0.75
BRIP1-204ENST00000579028 EPB41L4AQ9HCS5 686 aaPredicted RBP10.35□□□□□ -0.75
BRIP1-204ENST00000579028 GPHNQ9NQX3 736 aaPredicted RBP10.35□□□□□ -0.75
BRIP1-204ENST00000579028 XIRP2A4UGR9 3374 aa10.35□□□□□ -0.75
BRIP1-204ENST00000579028 KPNA6O60684 536 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 HMMRO75330 724 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 PRDM1O75626 825 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 SLC1A4P43007 532 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 KCNJ6P48051 423 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 ALDH5A1P51649 535 aaPredicted RBP10.34□□□□□ -0.75
BRIP1-204ENST00000579028 WDR5P61964 334 aaKnown RBP10.34□□□□□ -0.75
BRIP1-204ENST00000579028 IKQ13123 557 aaPredicted RBP10.34□□□□□ -0.75
BRIP1-204ENST00000579028 NSMFQ6X4W1 530 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 SIRT2Q8IXJ6 389 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 OR6J1Q8NGC5 347 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.34□□□□□ -0.75
BRIP1-204ENST00000579028 GDPD5Q8WTR4 605 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 APPBP2Q92624 585 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 OSBP2Q969R2 916 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 PURBQ96QR8 312 aaKnown RBP10.34□□□□□ -0.75
BRIP1-204ENST00000579028 KCNH6Q9H252 994 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 SUGCTQ9HAC7 445 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 ADD3Q9UEY8 706 aaKnown RBP10.34□□□□□ -0.75
BRIP1-204ENST00000579028 SIP14410 1827 aa10.34□□□□□ -0.75
BRIP1-204ENST00000579028 NKRFO15226 690 aaKnown RBP eCLIP10.33□□□□□ -0.76
BRIP1-204ENST00000579028 TSPY3P0CV98 308 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 TSPY8P0CW00 308 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 ALADP13716 330 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 GNAT2P19087 354 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 MCCP23508 829 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 TDO2P48775 406 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 ERVK-21P61565 698 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 NHLH1Q02575 133 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 GPNMBQ14956 572 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 BRDTQ58F21 947 aaPredicted RBP10.33□□□□□ -0.76
BRIP1-204ENST00000579028 RCSD1Q6JBY9 416 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 CAGE1Q8TC20 777 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 AFAP1L1Q8TED9 768 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 TGS1Q96RS0 853 aaKnown RBP10.33□□□□□ -0.76
BRIP1-204ENST00000579028 BCL11AQ9H165 835 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 CCPG1Q9ULG6 757 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 PRR12Q9ULL5 1215 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 ISY1Q9ULR0 285 aaKnown RBP10.33□□□□□ -0.76
BRIP1-204ENST00000579028 BDP1A6H8Y1 2624 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms