RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 H3BQV1 296 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 GCOM1H8Y6P7 765 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 STXBP3O00186 592 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 TNPO2O14787 897 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 GNRH1P01148 92 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 POLR2MP0CAP2 368 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 LACTBP83111 547 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PKN1Q16512 942 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 FBXO46Q6PJ61 603 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 NSMFQ6X4W1 530 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 RNF207Q6ZRF8 634 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 ABRAQ8N0Z2 381 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PSTPIP2Q9H939 334 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 EHMT1Q9H9B1 1298 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 VPS54Q9P1Q0 977 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 MCM3APO60318 1980 aa12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 KIAA1217Q5T5P2 1943 aa12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 B4DLN1 442 aa12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PPP1R11O60927 126 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 CFBP00751 764 aa12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 FDPSP14324 419 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 GNL2Q13823 731 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 LARP1BQ659C4 914 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 GPR142Q7Z601 462 aa12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 ZNF296Q8WUU4 475 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 SOCS4Q8WXH5 440 aa12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PORCNQ9H237 461 aa12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 EFCC1Q9HA90 598 aa12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 RIC8AQ9NPQ8 531 aa12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 RIPK3Q9Y572 518 aa12.94□□□□□ -0.34
CDK5RAP3-210ENST00000578733 SLC15A5A6NIM6 579 aa12.93□□□□□ -0.34
CDK5RAP3-210ENST00000578733 SPDYE3A6NKU9 549 aa12.93□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PSMC4P43686 418 aa12.93□□□□□ -0.34
CDK5RAP3-210ENST00000578733 POTEEQ6S8J3 1075 aa12.93□□□□□ -0.34
CDK5RAP3-210ENST00000578733 REXO1Q8N1G1 1221 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-210ENST00000578733 NUDT12Q9BQG2 462 aa12.93□□□□□ -0.34
CDK5RAP3-210ENST00000578733 ZMYND12Q9H0C1 365 aa12.93□□□□□ -0.34
CDK5RAP3-210ENST00000578733 ADD3Q9UEY8 706 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PCDHA4Q9UN74 947 aa12.93□□□□□ -0.34
CDK5RAP3-210ENST00000578733 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PIK3CDO00329 1044 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 NFIBO00712 420 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PEX10O60683 326 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 FOSP01100 380 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 MMP1P03956 469 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PTPREP23469 700 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 KRT2P35908 639 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 RGS2P41220 211 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PRMT2P55345 433 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 GHRHRQ02643 423 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 AP3B2Q13367 1082 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 MUM1L1Q5H9M0 696 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 DPP9Q86TI2 863 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 DAGLBQ8NCG7 672 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 SPRYD3Q8NCJ5 442 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 CLEC4DQ8WXI8 215 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PHF20Q9BVI0 1012 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 R3HDMLQ9H3Y0 253 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 A1CFQ9NQ94 594 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 CYP39A1Q9NYL5 469 aa12.92□□□□□ -0.34
CDK5RAP3-210ENST00000578733 LOC102724159A0A0B4J2E5 919 aa12.91□□□□□ -0.34
CDK5RAP3-210ENST00000578733 HSD17B4P51659 736 aa12.91□□□□□ -0.34
CDK5RAP3-210ENST00000578733 RPS6P62753 249 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-210ENST00000578733 GRB14Q14449 540 aa12.91□□□□□ -0.34
CDK5RAP3-210ENST00000578733 PWP2Q15269 919 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-210ENST00000578733 HABP4Q5JVS0 413 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-210ENST00000578733 KRT40Q6A162 431 aa12.91□□□□□ -0.34
CDK5RAP3-210ENST00000578733 BLIDQ8IZY5 108 aa12.91□□□□□ -0.34
CDK5RAP3-210ENST00000578733 DNERQ8NFT8 737 aa12.91□□□□□ -0.34
CDK5RAP3-210ENST00000578733 FBXO18Q8NFZ0 1043 aa12.91□□□□□ -0.34
CDK5RAP3-210ENST00000578733 CD99L2Q8TCZ2 262 aa12.91□□□□□ -0.34
CDK5RAP3-210ENST00000578733 CCDC194A0A1B0GVG4 234 aa12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 ECM2O94769 699 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 TAL1P17542 331 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 ADORA2AP29274 412 aa12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 FOSBP53539 338 aa12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 MAP2K5Q13163 448 aa12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 BAATQ14032 418 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 TRMT44Q8IYL2 757 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 AIFM3Q96NN9 605 aa12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 KCNJ14Q9UNX9 436 aa12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 DIS3Q9Y2L1 958 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 LRRC37A2A6NM11 1700 aa12.9□□□□□ -0.34
CDK5RAP3-210ENST00000578733 VPS37CA5D8V6 355 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 STX6O43752 255 aa12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 HOXA13P31271 388 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 ARHGEF16Q5VV41 709 aa12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 MCTP1Q6DN14 999 aa12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 TYW1BQ6NUM6 668 aa12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 USP17L6PQ6QN14 398 aa12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 SLC30A10Q6XR72 485 aa12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 KRT25Q7Z3Z0 450 aa12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 FCHSD1Q86WN1 690 aa12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 DIS3L2Q8IYB7 885 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 SYTL5Q8TDW5 730 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 NSUN6Q8TEA1 469 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 TRIM47Q96LD4 638 aa12.89□□□□□ -0.35
CDK5RAP3-210ENST00000578733 IPO9Q96P70 1041 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms