RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 CXCL17Q6UXB2 119 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ARMCX2Q7L311 632 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SLF1Q9BQI6 1058 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 KANSL2Q9H9L4 492 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 GREB1LQ9C091 1923 aaPredicted RBP8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ASTN1O14525 1302 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 BAIAP3O94812 1187 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 AKR1B1P15121 316 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 RARSP54136 660 aaKnown RBP8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TNFAIP2Q03169 654 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 POLA2Q14181 598 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 FSCN1Q16658 493 aaKnown RBP8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TLK2Q86UE8 772 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 CLEC10AQ8IUN9 316 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 LURAP1LQ8IV03 231 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 HERC6Q8IVU3 1022 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 CHST13Q8NET6 341 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TRPV6Q9H1D0 765 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ALDH8A1Q9H2A2 487 aaPredicted RBP8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 DCP1AQ9NPI6 582 aaPredicted RBP8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 GNEQ9Y223 722 aaKnown RBP8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 Q9Y3F1 56 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 NLRC5Q86WI3 1866 aa8.64□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TNKSO95271 1327 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 PITPNM1O00562 1244 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 BCAR3O75815 825 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 PDGFBP01127 241 aaPredicted RBP8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 EEF2P13639 858 aaKnown RBP8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 OAZ1P54368 228 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 BEX3Q00994 111 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 EVX2Q03828 476 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SIGLEC14Q08ET2 396 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 OS9Q13438 667 aaPredicted RBP8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TTF1Q15361 905 aaPredicted RBP8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 FAM83BQ5T0W9 1011 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 MCTP2Q6DN12 878 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 CCDC144CPQ8IYA2 1237 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 PRPF38AQ8NAV1 312 aaKnown RBP8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SSH3Q8TE77 659 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SCLYQ96I15 445 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 AP5M1Q9H0R1 490 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SUGCTQ9HAC7 445 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 RIPK3Q9Y572 518 aa8.63□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SMG1Q96Q15 3661 aaKnown RBP8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SCN10AQ9Y5Y9 1956 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 MYO10Q9HD67 2058 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 LCHNA4D1U4 455 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ASB14A6NK59 587 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 FDX1P10109 184 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 PDE6AP16499 860 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 COL19A1Q14993 1142 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SMAD2Q15796 467 aaKnown RBP8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 C16orf86Q6ZW13 317 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ANKRD35Q8N283 1001 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 FAM133AQ8N9E0 248 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 CHAMP1Q96JM3 812 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ANTXR1Q9H6X2 564 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SLC38A10Q9HBR0 1119 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ATP8A2Q9NTI2 1148 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TLR7Q9NYK1 1049 aaKnown RBP8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 RCAN3Q9UKA8 241 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 FAM50BQ9Y247 325 aa8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 NOP58Q9Y2X3 529 aaKnown RBP8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 USP9XQ93008 2570 aaPredicted RBP8.62□□□□□ -1.03
CDK5RAP3-209ENST00000578663 BAZ2AQ9UIF9 1905 aaKnown RBP8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ZBED4O75132 1171 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 CYP2D6P10635 497 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 CDK8P49336 464 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 RSPO4Q2I0M5 234 aaPredicted RBP8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SLC9C2Q5TAH2 1124 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 C12orf60Q5U649 245 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 IQSEC1Q6DN90 963 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 NOL8Q76FK4 1167 aaKnown RBP8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 AMOTL1Q8IY63 956 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SDR42E1Q8WUS8 393 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 EAF2Q96CJ1 260 aaPredicted RBP8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 DYNLL2Q96FJ2 89 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 POP1Q99575 1024 aaKnown RBP8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 POLR3EQ9NVU0 708 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SYNPO2Q9UMS6 1093 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 COL4A3Q01955 1670 aa8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 DSPP15924 2871 aaKnown RBP8.61□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TCRBV5S4A2TA0A5A2 114 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 MBTPS2O43462 519 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 SURF6O75683 361 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 NDUFB10O96000 172 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ADRB1P08588 477 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 LTBRP36941 435 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 KCNJ6P48051 423 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ERVK-21P61565 698 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 LRRFIP1Q32MZ4 808 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 DEFB128Q7Z7B8 93 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 LCORLQ8N3X6 602 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 TMEM105Q8N8V8 129 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 PABPC5Q96DU9 382 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 CCDC8Q9H0W5 538 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 ACAD9Q9H845 621 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 VTA1Q9NP79 307 aa8.6□□□□□ -1.03
CDK5RAP3-209ENST00000578663 NYAP2Q9P242 653 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms