RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 BIN2Q9UBW5 565 aaPredicted RBP15.32■□□□□ 0.04
SRSF1-202ENST00000578430 ZNF214Q9UL59 606 aaPredicted RBP15.32■□□□□ 0.04
SRSF1-202ENST00000578430 TCHHQ07283 1943 aa15.32■□□□□ 0.04
SRSF1-202ENST00000578430 GCOM1H8Y6P7 765 aaPredicted RBP15.31■□□□□ 0.04
SRSF1-202ENST00000578430 OPLAHO14841 1288 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 PRPF40AO75400 957 aaKnown RBP15.31■□□□□ 0.04
SRSF1-202ENST00000578430 SLC10A3P09131 477 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 POLR2MP0CAP2 368 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 ALAS1P13196 640 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 STAT3P40763 770 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 TOB1P50616 345 aaPredicted RBP15.31■□□□□ 0.04
SRSF1-202ENST00000578430 LBX1P52954 281 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 INHBEP58166 350 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 TMEM132BQ14DG7 1078 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 SLC39A14Q15043 492 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 STK38Q15208 465 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 SKOR2Q2VWA4 1001 aaPredicted RBP15.31■□□□□ 0.04
SRSF1-202ENST00000578430 EARS2Q5JPH6 523 aaKnown RBP15.31■□□□□ 0.04
SRSF1-202ENST00000578430 TTC38Q5R3I4 469 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 JAKMIP3Q5VZ66 844 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 RASGRP4Q8TDF6 673 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 BRI3BPQ8WY22 251 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 CHAMP1Q96JM3 812 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 P2RX7Q99572 595 aaKnown RBP15.31■□□□□ 0.04
SRSF1-202ENST00000578430 EHMT1Q9H9B1 1298 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.31■□□□□ 0.04
SRSF1-202ENST00000578430 LMBRD1Q9NUN5 540 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 WBP1LQ9NX94 342 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 RABGAP1Q9Y3P9 1069 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 A0A0G2JMZ2 1700 aa15.31■□□□□ 0.04
SRSF1-202ENST00000578430 RASSF10A6NK89 507 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 SPDYE3A6NKU9 549 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 BTBD19C9JJ37 291 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 ADAMTS3O15072 1205 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 PPP6R2O75170 966 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 HSD17B4P51659 736 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 UBE2HP62256 183 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 SF3A1Q15459 793 aaKnown RBP15.3■□□□□ 0.04
SRSF1-202ENST00000578430 UBE2SQ16763 222 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 SNRNP48Q6IEG0 339 aaKnown RBP15.3■□□□□ 0.04
SRSF1-202ENST00000578430 NEK8Q86SG6 692 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 CHST13Q8NET6 341 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 CLEC4DQ8WXI8 215 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 TRERF1Q96PN7 1200 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 FBXO40Q9UH90 709 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 CLIC4Q9Y696 253 aa15.3■□□□□ 0.04
SRSF1-202ENST00000578430 FAM205CA6NFA0 338 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 PDHXO00330 501 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 SPTLC2O15270 562 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 SLC25A27O95847 323 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 CFBP00751 764 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 GCFC2P16383 781 aaKnown RBP15.29■□□□□ 0.04
SRSF1-202ENST00000578430 GCLCP48506 637 aaPredicted RBP15.29■□□□□ 0.04
SRSF1-202ENST00000578430 USP11P51784 963 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 CEBPZQ03701 1054 aaKnown RBP15.29■□□□□ 0.04
SRSF1-202ENST00000578430 PTPAQ15257 358 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 INF2Q27J81 1249 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 DEFB115Q30KQ5 88 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 USP17L6PQ6QN14 398 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 RIOX2Q8IUF8 465 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 TBCKQ8TEA7 893 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 ANO3Q9BYT9 981 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 GDPD2Q9HCC8 539 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 RNF146Q9NTX7 359 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 TMEM260Q9NX78 707 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 ABT1Q9ULW3 272 aaKnown RBP15.29■□□□□ 0.04
SRSF1-202ENST00000578430 PCDHB6Q9Y5E3 794 aa15.29■□□□□ 0.04
SRSF1-202ENST00000578430 GOLGA6L4A6NEF3 574 aa15.28■□□□□ 0.04
SRSF1-202ENST00000578430 LAD1O00515 517 aa15.28■□□□□ 0.04
SRSF1-202ENST00000578430 MBD3O95983 291 aa15.28■□□□□ 0.04
SRSF1-202ENST00000578430 NOM1Q5C9Z4 860 aaKnown RBP15.28■□□□□ 0.04
SRSF1-202ENST00000578430 MOXD1Q6UVY6 613 aa15.28■□□□□ 0.04
SRSF1-202ENST00000578430 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.28■□□□□ 0.04
SRSF1-202ENST00000578430 PARK7Q99497 189 aaKnown RBP15.28■□□□□ 0.04
SRSF1-202ENST00000578430 FTOQ9C0B1 505 aaKnown RBP eCLIP15.28■□□□□ 0.04
SRSF1-202ENST00000578430 SPATC1LQ9H0A9 340 aa15.28■□□□□ 0.04
SRSF1-202ENST00000578430 ACAD9Q9H845 621 aa15.28■□□□□ 0.04
SRSF1-202ENST00000578430 COL11A1P12107 1806 aaPredicted RBP15.28■□□□□ 0.04
SRSF1-202ENST00000578430 HSPA8P11142 646 aaKnown RBP15.27■□□□□ 0.04
SRSF1-202ENST00000578430 ATP2B1P20020 1258 aa15.27■□□□□ 0.04
SRSF1-202ENST00000578430 SREBF1P36956 1147 aa15.27■□□□□ 0.04
SRSF1-202ENST00000578430 SREBF2Q12772 1141 aa15.27■□□□□ 0.04
SRSF1-202ENST00000578430 MKRN3Q13064 507 aaKnown RBP15.27■□□□□ 0.04
SRSF1-202ENST00000578430 PLS1Q14651 629 aa15.27■□□□□ 0.04
SRSF1-202ENST00000578430 MUM1L1Q5H9M0 696 aa15.27■□□□□ 0.04
SRSF1-202ENST00000578430 PPP4R3AQ6IN85 833 aa15.27■□□□□ 0.04
SRSF1-202ENST00000578430 BTBD7Q9P203 1132 aa15.27■□□□□ 0.04
SRSF1-202ENST00000578430 RBBP6Q7Z6E9 1792 aaKnown RBP15.26■□□□□ 0.03
SRSF1-202ENST00000578430 NFIBO00712 420 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 CYP3A4P08684 503 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 ME1P48163 572 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 CCNA1P78396 465 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 ATP2C1P98194 919 aaPredicted RBP15.26■□□□□ 0.03
SRSF1-202ENST00000578430 ZNF174Q15697 407 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 LETM2Q2VYF4 491 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 ARL6IP4Q66PJ3 421 aaKnown RBP15.26■□□□□ 0.03
SRSF1-202ENST00000578430 ADALQ6DHV7 355 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 RNF207Q6ZRF8 634 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 REM2Q8IYK8 340 aaPredicted RBP15.26■□□□□ 0.03
SRSF1-202ENST00000578430 KRI1Q8N9T8 703 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms