RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 TNFRSF10AO00220 468 aa24.79■■□□□ 1.56
TSEN54-205ENST00000578415 ALDH5A1P51649 535 aaPredicted RBP24.79■■□□□ 1.56
TSEN54-205ENST00000578415 RABGGTBP53611 331 aa24.79■■□□□ 1.56
TSEN54-205ENST00000578415 SCLYQ96I15 445 aa24.79■■□□□ 1.56
TSEN54-205ENST00000578415 SLC28A3Q9HAS3 691 aa24.79■■□□□ 1.56
TSEN54-205ENST00000578415 THEGQ9P2T0 379 aa24.79■■□□□ 1.56
TSEN54-205ENST00000578415 IGFBP4P22692 258 aa24.78■■□□□ 1.56
TSEN54-205ENST00000578415 SYDE2Q5VT97 1194 aa24.78■■□□□ 1.56
TSEN54-205ENST00000578415 ASB2Q96Q27 587 aa24.78■■□□□ 1.56
TSEN54-205ENST00000578415 WDR11Q9BZH6 1224 aa24.78■■□□□ 1.56
TSEN54-205ENST00000578415 TRMT13Q9NUP7 481 aaKnown RBP24.78■■□□□ 1.56
TSEN54-205ENST00000578415 ADD3Q9UEY8 706 aaKnown RBP24.78■■□□□ 1.56
TSEN54-205ENST00000578415 CHD7Q9P2D1 2997 aa24.77■■□□□ 1.56
TSEN54-205ENST00000578415 PURAQ00577 322 aaKnown RBP24.77■■□□□ 1.56
TSEN54-205ENST00000578415 ALX1Q15699 326 aa24.77■■□□□ 1.56
TSEN54-205ENST00000578415 CCDC85BQ15834 202 aaPredicted RBP24.77■■□□□ 1.56
TSEN54-205ENST00000578415 SLC30A10Q6XR72 485 aa24.77■■□□□ 1.56
TSEN54-205ENST00000578415 RPUSD2Q8IZ73 545 aaKnown RBP24.77■■□□□ 1.56
TSEN54-205ENST00000578415 TMEM47Q9BQJ4 181 aa24.77■■□□□ 1.56
TSEN54-205ENST00000578415 SLC4A7Q9Y6M7 1214 aa24.77■■□□□ 1.56
TSEN54-205ENST00000578415 FRMPD2Q68DX3 1309 aaPredicted RBP24.77■■□□□ 1.56
TSEN54-205ENST00000578415 MYO9BQ13459 2157 aa24.77■■□□□ 1.56
TSEN54-205ENST00000578415 LOC102724159A0A0B4J2E5 919 aa24.76■■□□□ 1.55
TSEN54-205ENST00000578415 RBM47A0AV96 593 aaKnown RBP24.76■■□□□ 1.55
TSEN54-205ENST00000578415 TOP1P11387 765 aaKnown RBP24.76■■□□□ 1.55
TSEN54-205ENST00000578415 CYP2C9P11712 490 aa24.76■■□□□ 1.55
TSEN54-205ENST00000578415 MYOGP15173 224 aa24.76■■□□□ 1.55
TSEN54-205ENST00000578415 PWP2Q15269 919 aaKnown RBP24.76■■□□□ 1.55
TSEN54-205ENST00000578415 CLEC4DQ8WXI8 215 aa24.76■■□□□ 1.55
TSEN54-205ENST00000578415 GPCPD1Q9NPB8 672 aa24.76■■□□□ 1.55
TSEN54-205ENST00000578415 POLR3EQ9NVU0 708 aa24.76■■□□□ 1.55
TSEN54-205ENST00000578415 PTPDC1A2A3K4 754 aa24.75■■□□□ 1.55
TSEN54-205ENST00000578415 EVI5LQ96CN4 794 aa24.75■■□□□ 1.55
TSEN54-205ENST00000578415 TNKSO95271 1327 aa24.75■■□□□ 1.55
TSEN54-205ENST00000578415 FGAP02671 866 aa24.74■■□□□ 1.55
TSEN54-205ENST00000578415 MYL3P08590 195 aa24.74■■□□□ 1.55
TSEN54-205ENST00000578415 TTLL4Q14679 1199 aa24.74■■□□□ 1.55
TSEN54-205ENST00000578415 RRP12Q5JTH9 1297 aaKnown RBP24.74■■□□□ 1.55
TSEN54-205ENST00000578415 PPP2R2DQ66LE6 453 aa24.74■■□□□ 1.55
TSEN54-205ENST00000578415 HELLSQ9NRZ9 838 aa24.74■■□□□ 1.55
TSEN54-205ENST00000578415 TOMM22Q9NS69 142 aa24.74■■□□□ 1.55
TSEN54-205ENST00000578415 TCP11L1Q9NUJ3 509 aa24.74■■□□□ 1.55
TSEN54-205ENST00000578415 PCDHA11Q9Y5I1 949 aa24.74■■□□□ 1.55
TSEN54-205ENST00000578415 GBF1Q92538 1859 aa24.73■■□□□ 1.55
TSEN54-205ENST00000578415 ZBBXA8MT70 800 aa24.73■■□□□ 1.55
TSEN54-205ENST00000578415 SUPT20HL2P0C7V6 817 aa24.73■■□□□ 1.55
TSEN54-205ENST00000578415 PDHBP11177 359 aa24.73■■□□□ 1.55
TSEN54-205ENST00000578415 ATP2A2P16615 1042 aaKnown RBP24.73■■□□□ 1.55
TSEN54-205ENST00000578415 CPT1AP50416 773 aa24.73■■□□□ 1.55
TSEN54-205ENST00000578415 MRPS5P82675 430 aaKnown RBP24.73■■□□□ 1.55
TSEN54-205ENST00000578415 OR6J1Q8NGC5 347 aa24.73■■□□□ 1.55
TSEN54-205ENST00000578415 ADAMTS19Q8TE59 1207 aa24.73■■□□□ 1.55
TSEN54-205ENST00000578415 FAM227BQ96M60 508 aa24.73■■□□□ 1.55
TSEN54-205ENST00000578415 A0A0D9SFI3 127 aa24.72■■□□□ 1.55
TSEN54-205ENST00000578415 PFKMP08237 780 aa24.72■■□□□ 1.55
TSEN54-205ENST00000578415 EDNRBP24530 442 aa24.72■■□□□ 1.55
TSEN54-205ENST00000578415 CALML3P27482 149 aa24.72■■□□□ 1.55
TSEN54-205ENST00000578415 MTG1Q9BT17 334 aaPredicted RBP24.72■■□□□ 1.55
TSEN54-205ENST00000578415 RPS6P62753 249 aaKnown RBP24.71■■□□□ 1.55
TSEN54-205ENST00000578415 NBPF20Q3BBV1 942 aa24.71■■□□□ 1.55
TSEN54-205ENST00000578415 ANKRD45Q5TZF3 282 aa24.71■■□□□ 1.55
TSEN54-205ENST00000578415 RNF207Q6ZRF8 634 aa24.71■■□□□ 1.55
TSEN54-205ENST00000578415 DEFB128Q7Z7B8 93 aa24.71■■□□□ 1.55
TSEN54-205ENST00000578415 PPP1R13LQ8WUF5 828 aa24.71■■□□□ 1.55
TSEN54-205ENST00000578415 ZMYM6O95789 1325 aa24.7■■□□□ 1.54
TSEN54-205ENST00000578415 SNHG28P0DPA3 235 aa24.7■■□□□ 1.54
TSEN54-205ENST00000578415 PDE1AP54750 535 aa24.7■■□□□ 1.54
TSEN54-205ENST00000578415 ZNF543Q08ER8 600 aa24.7■■□□□ 1.54
TSEN54-205ENST00000578415 PPP2R5BQ15173 497 aa24.7■■□□□ 1.54
TSEN54-205ENST00000578415 ZNF589Q86UQ0 364 aaPredicted RBP24.7■■□□□ 1.54
TSEN54-205ENST00000578415 GPHNQ9NQX3 736 aaPredicted RBP24.7■■□□□ 1.54
TSEN54-205ENST00000578415 WDR19Q8NEZ3 1342 aa24.69■■□□□ 1.54
TSEN54-205ENST00000578415 NKRFO15226 690 aaKnown RBP eCLIP24.69■■□□□ 1.54
TSEN54-205ENST00000578415 HSPD1P10809 573 aaKnown RBP24.69■■□□□ 1.54
TSEN54-205ENST00000578415 HAND2P61296 217 aa24.69■■□□□ 1.54
TSEN54-205ENST00000578415 PDE4DQ08499 809 aa24.69■■□□□ 1.54
TSEN54-205ENST00000578415 MCMDC2Q4G0Z9 681 aa24.69■■□□□ 1.54
TSEN54-205ENST00000578415 FAM47CQ5HY64 1035 aa24.69■■□□□ 1.54
TSEN54-205ENST00000578415 COPS5Q92905 334 aa24.69■■□□□ 1.54
TSEN54-205ENST00000578415 UHRF1Q96T88 793 aaPredicted RBP24.69■■□□□ 1.54
TSEN54-205ENST00000578415 PNMA2Q9UL42 364 aa24.69■■□□□ 1.54
TSEN54-205ENST00000578415 SCN10AQ9Y5Y9 1956 aa24.68■■□□□ 1.54
TSEN54-205ENST00000578415 A6NJR5 290 aa24.68■■□□□ 1.54
TSEN54-205ENST00000578415 DNERQ8NFT8 737 aa24.68■■□□□ 1.54
TSEN54-205ENST00000578415 SCFD2Q8WU76 684 aa24.68■■□□□ 1.54
TSEN54-205ENST00000578415 CA3P07451 260 aa24.67■■□□□ 1.54
TSEN54-205ENST00000578415 COL9A1P20849 921 aa24.67■■□□□ 1.54
TSEN54-205ENST00000578415 TMEM67Q5HYA8 995 aa24.67■■□□□ 1.54
TSEN54-205ENST00000578415 NFRKBQ6P4R8 1299 aa24.67■■□□□ 1.54
TSEN54-205ENST00000578415 TBC1D10CQ8IV04 446 aa24.67■■□□□ 1.54
TSEN54-205ENST00000578415 MICALL1Q8N3F8 863 aa24.67■■□□□ 1.54
TSEN54-205ENST00000578415 TTC14Q96N46 770 aa24.67■■□□□ 1.54
TSEN54-205ENST00000578415 RAD50Q92878 1312 aa24.66■■□□□ 1.54
TSEN54-205ENST00000578415 PITPNM1O00562 1244 aa24.66■■□□□ 1.54
TSEN54-205ENST00000578415 ARIH2O95376 493 aa24.66■■□□□ 1.54
TSEN54-205ENST00000578415 IQCF3P0C7M6 154 aa24.66■■□□□ 1.54
TSEN54-205ENST00000578415 RFC2P35250 354 aa24.66■■□□□ 1.54
TSEN54-205ENST00000578415 NMIQ13287 307 aaPredicted RBP24.66■■□□□ 1.54
TSEN54-205ENST00000578415 BRDTQ58F21 947 aaPredicted RBP24.66■■□□□ 1.54
TSEN54-205ENST00000578415 ZBTB47Q9UFB7 747 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms