RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PARP1P09874 1014 aaKnown RBP14.89□□□□□ -0.03
CCDC57-211ENST00000578187 CST5P28325 142 aaPredicted RBP14.89□□□□□ -0.03
CCDC57-211ENST00000578187 KCNA10Q16322 511 aa14.89□□□□□ -0.03
CCDC57-211ENST00000578187 SLC17A8Q8NDX2 589 aa14.89□□□□□ -0.03
CCDC57-211ENST00000578187 TOX2Q96NM4 488 aa14.89□□□□□ -0.03
CCDC57-211ENST00000578187 NEK1Q96PY6 1258 aa14.89□□□□□ -0.03
CCDC57-211ENST00000578187 LY9Q9HBG7 655 aa14.89□□□□□ -0.03
CCDC57-211ENST00000578187 A1CFQ9NQ94 594 aaKnown RBP14.89□□□□□ -0.03
CCDC57-211ENST00000578187 TMEM39AQ9NV64 488 aa14.89□□□□□ -0.03
CCDC57-211ENST00000578187 LRRC37A2A6NM11 1700 aa14.89□□□□□ -0.03
CCDC57-211ENST00000578187 ICAM1P05362 532 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 TROAPQ12815 778 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 GRM4Q14833 912 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 ADCK5Q3MIX3 580 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 GNASQ5JWF2 1037 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 ZNF697Q5TEC3 545 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 FAM109BQ6ICB4 259 aaPredicted RBP14.88□□□□□ -0.03
CCDC57-211ENST00000578187 Q7L0L9 218 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 ANKRD33Q7Z3H0 272 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 FAM133AQ8N9E0 248 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 KLHDC9Q8NEP7 349 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 MPHOSPH6Q99547 160 aaKnown RBP14.88□□□□□ -0.03
CCDC57-211ENST00000578187 ADD3Q9UEY8 706 aaKnown RBP14.88□□□□□ -0.03
CCDC57-211ENST00000578187 STXBP5LQ9Y2K9 1186 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 ELP1O95163 1332 aa14.88□□□□□ -0.03
CCDC57-211ENST00000578187 MCM3APO60318 1980 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 TRIM43BA6NCK2 446 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 PALM3A6NDB9 673 aaPredicted RBP14.87□□□□□ -0.03
CCDC57-211ENST00000578187 KIAA0355O15063 1070 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 TLR3O15455 904 aaKnown RBP14.87□□□□□ -0.03
CCDC57-211ENST00000578187 ZEB2O60315 1214 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 ASGR1P07306 291 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 LIFRP42702 1097 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 GJA9P57773 515 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 SNAP25P60880 206 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 CNTN2Q02246 1040 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 TNFAIP2Q03169 654 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 NSMFQ6X4W1 530 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 SH3RF1Q7Z6J0 888 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 TRIM43Q96BQ3 446 aaPredicted RBP14.87□□□□□ -0.03
CCDC57-211ENST00000578187 AP5M1Q9H0R1 490 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 UPF3AQ9H1J1 476 aaKnown RBP14.87□□□□□ -0.03
CCDC57-211ENST00000578187 CPVLQ9H3G5 476 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 GPHNQ9NQX3 736 aaPredicted RBP14.87□□□□□ -0.03
CCDC57-211ENST00000578187 MAD2L2Q9UI95 211 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 SNX14Q9Y5W7 946 aa14.87□□□□□ -0.03
CCDC57-211ENST00000578187 A0A0U1RQG5 324 aaPredicted RBP14.86□□□□□ -0.03
CCDC57-211ENST00000578187 DDAH1O94760 285 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 HMGB1P09429 215 aaKnown RBP14.86□□□□□ -0.03
CCDC57-211ENST00000578187 EXOSC10Q01780 885 aaKnown RBP14.86□□□□□ -0.03
CCDC57-211ENST00000578187 FPGSQ05932 587 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 SHHQ15465 462 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 DHX32Q7L7V1 743 aaKnown RBP14.86□□□□□ -0.03
CCDC57-211ENST00000578187 CATIPQ7Z7H3 387 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 SGMS1Q86VZ5 419 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 ZNF654Q8IZM8 581 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 TMTC2Q8N394 836 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 STAG2Q8N3U4 1231 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 FGD4Q96M96 766 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 MAP3K14Q99558 947 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 USP26Q9BXU7 913 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 UBA5Q9GZZ9 404 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 MTMR10Q9NXD2 777 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 CYP39A1Q9NYL5 469 aa14.86□□□□□ -0.03
CCDC57-211ENST00000578187 CABYRO75952 493 aa14.85□□□□□ -0.03
CCDC57-211ENST00000578187 CDC37Q16543 378 aaPredicted RBP14.85□□□□□ -0.03
CCDC57-211ENST00000578187 CCSAPQ6IQ19 270 aaPredicted RBP14.85□□□□□ -0.03
CCDC57-211ENST00000578187 TLK2Q86UE8 772 aa14.85□□□□□ -0.03
CCDC57-211ENST00000578187 ADGRF4Q8IZF3 695 aa14.85□□□□□ -0.03
CCDC57-211ENST00000578187 RNPC3Q96LT9 517 aaKnown RBP14.85□□□□□ -0.03
CCDC57-211ENST00000578187 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
CCDC57-211ENST00000578187 BAZ2BQ9UIF8 2168 aaKnown RBP14.85□□□□□ -0.03
CCDC57-211ENST00000578187 LOC102724159A0A0B4J2E5 919 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 PTPDC1A2A3K4 754 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 MYADML2A6NDP7 307 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 SOWAHBA6NEL2 793 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 B4DLN1 442 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 KLRF2D3W0D1 207 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 MRPL12P52815 198 aaKnown RBP14.84□□□□□ -0.03
CCDC57-211ENST00000578187 SMAD3P84022 425 aaKnown RBP14.84□□□□□ -0.03
CCDC57-211ENST00000578187 FAAP100Q0VG06 881 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 PWP2Q15269 919 aaKnown RBP14.84□□□□□ -0.03
CCDC57-211ENST00000578187 SLC35G1Q2M3R5 365 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 MUM1L1Q5H9M0 696 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 IQSEC1Q6DN90 963 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 MTMR8Q96EF0 704 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 TCEANC2Q96MN5 208 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 JAKMIP1Q96N16 626 aaKnown RBP14.84□□□□□ -0.03
CCDC57-211ENST00000578187 SEZ6LQ9BYH1 1024 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 LRRC2Q9BYS8 371 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 JMJD4Q9H9V9 463 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 VTA1Q9NP79 307 aa14.84□□□□□ -0.03
CCDC57-211ENST00000578187 CCDC69A6NI79 296 aa14.83□□□□□ -0.04
CCDC57-211ENST00000578187 ARVCFO00192 962 aa14.83□□□□□ -0.04
CCDC57-211ENST00000578187 ADCY6O43306 1168 aa14.83□□□□□ -0.04
CCDC57-211ENST00000578187 TIMP1P01033 207 aa14.83□□□□□ -0.04
CCDC57-211ENST00000578187 FSCN1Q16658 493 aaKnown RBP14.83□□□□□ -0.04
CCDC57-211ENST00000578187 C9orf50Q5SZB4 431 aa14.83□□□□□ -0.04
CCDC57-211ENST00000578187 NFXL1Q6ZNB6 911 aa14.83□□□□□ -0.04
CCDC57-211ENST00000578187 MYL10Q9BUA6 226 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms