RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 NOGQ13253 232 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 TMEM132BQ14DG7 1078 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 STK38Q15208 465 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 TTC38Q5R3I4 469 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 ANO1Q5XXA6 986 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 PAXIP1Q6ZW49 1069 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 RIOX2Q8IUF8 465 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 AGBL1Q96MI9 1066 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 TRERF1Q96PN7 1200 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 ANO3Q9BYT9 981 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 MORC2Q9Y6X9 1032 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 GOLGA6L4A6NEF3 574 aa15.14■□□□□ 0.01
CDK5RAP3-205ENST00000577802 LAD1O00515 517 aa15.14■□□□□ 0.01
CDK5RAP3-205ENST00000577802 CFBP00751 764 aa15.14■□□□□ 0.01
CDK5RAP3-205ENST00000577802 HSD17B4P51659 736 aa15.14■□□□□ 0.01
CDK5RAP3-205ENST00000577802 SF3A1Q15459 793 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-205ENST00000577802 SHCBP1Q8NEM2 672 aa15.14■□□□□ 0.01
CDK5RAP3-205ENST00000577802 P2RX7Q99572 595 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-205ENST00000577802 SPATC1LQ9H0A9 340 aa15.14■□□□□ 0.01
CDK5RAP3-205ENST00000577802 HOMER2Q9NSB8 354 aa15.14■□□□□ 0.01
CDK5RAP3-205ENST00000577802 BIN2Q9UBW5 565 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-205ENST00000577802 CNPY2Q9Y2B0 182 aa15.14■□□□□ 0.01
CDK5RAP3-205ENST00000577802 RASSF10A6NK89 507 aa15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 MEIS2O14770 477 aa15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 ALDH1A1P00352 501 aa15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 UBE2SQ16763 222 aa15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 JAKMIP3Q5VZ66 844 aa15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 MOXD1Q6UVY6 613 aa15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 RNF207Q6ZRF8 634 aa15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 RASGRP4Q8TDF6 673 aa15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 USP28Q96RU2 1077 aa15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 MPHOSPH6Q99547 160 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 PAGR1Q9BTK6 254 aa15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 MROH8Q9H579 483 aa15.13■□□□□ 0.01
CDK5RAP3-205ENST00000577802 MBD3O95983 291 aa15.12■□□□□ 0.01
CDK5RAP3-205ENST00000577802 SREBF1P36956 1147 aa15.12■□□□□ 0.01
CDK5RAP3-205ENST00000577802 INF2Q27J81 1249 aa15.12■□□□□ 0.01
CDK5RAP3-205ENST00000577802 FAM173BQ6P4H8 233 aa15.12■□□□□ 0.01
CDK5RAP3-205ENST00000577802 USP17L6PQ6QN14 398 aa15.12■□□□□ 0.01
CDK5RAP3-205ENST00000577802 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDK5RAP3-205ENST00000577802 CCAR1Q8IX12 1150 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-205ENST00000577802 TBCKQ8TEA7 893 aa15.12■□□□□ 0.01
CDK5RAP3-205ENST00000577802 LEO1Q8WVC0 666 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-205ENST00000577802 CLEC4DQ8WXI8 215 aa15.12■□□□□ 0.01
CDK5RAP3-205ENST00000577802 FAM155AB1AL88 458 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 B4DLN1 442 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 NFIBO00712 420 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 OPLAHO14841 1288 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 SPTLC2O15270 562 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 PPP6R2O75170 966 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 ME1P48163 572 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 USP11P51784 963 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 ERVK-9P63128 1117 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 ERVK-24P63145 666 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 SLC39A14Q15043 492 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 TAF1CQ15572 869 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 NFKBIBQ15653 356 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 FAM110CQ1W6H9 321 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 SKOR2Q2VWA4 1001 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 NSMFQ6X4W1 530 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 FAM43AQ8N2R8 423 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 LINC00301Q8NCQ3 95 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 GPRC5AQ8NFJ5 357 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 TMEM260Q9NX78 707 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 MORF4L1Q9UBU8 362 aa15.11■□□□□ 0.01
CDK5RAP3-205ENST00000577802 THSD7BQ9C0I4 1608 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 NEMFO60524 1076 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 HOXA13P31271 388 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 UBE2HP62256 183 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 ARHGAP4P98171 946 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 SETQ01105 290 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 CEBPZQ03701 1054 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 LETM2Q2VYF4 491 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 DEFB115Q30KQ5 88 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 ARL6IP4Q66PJ3 421 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 PPP4R3AQ6IN85 833 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 XRRA1Q6P2D8 792 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 NCAPG2Q86XI2 1143 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 IFNL1Q8IU54 200 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 FERMT2Q96AC1 680 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 BTBD7Q9P203 1132 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 TFIP11Q9UBB9 837 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 RCOR1Q9UKL0 485 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 CLIC4Q9Y696 253 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 FRMPD4Q14CM0 1322 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 ZNF236Q9UL36 1845 aa15.1■□□□□ 0.01
CDK5RAP3-205ENST00000577802 FAM205CA6NFA0 338 aa15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 CCNT1O60563 726 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 CYP2C8P10632 490 aa15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 ATP2B1P20020 1258 aa15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 PRPHP41219 470 aa15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 TOB1P50616 345 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 KCTD2Q14681 263 aa15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 MUM1L1Q5H9M0 696 aa15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 EARS2Q5JPH6 523 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 FCHSD1Q86WN1 690 aa15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 ANKRD35Q8N283 1001 aa15.09■□□□□ 0.01
CDK5RAP3-205ENST00000577802 KRI1Q8N9T8 703 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms