RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 GHRHRQ02643 423 aa22.41■■□□□ 1.18
SS18-208ENST00000577751 TRAF1Q13077 416 aa22.41■■□□□ 1.18
SS18-208ENST00000577751 ACVR2BQ13705 512 aa22.41■■□□□ 1.18
SS18-208ENST00000577751 RUFY3Q7L099 469 aa22.41■■□□□ 1.18
SS18-208ENST00000577751 MCF2L2Q86YR7 1114 aa22.41■■□□□ 1.18
SS18-208ENST00000577751 PCDHA1Q9Y5I3 950 aa22.41■■□□□ 1.18
SS18-208ENST00000577751 KLF18A0A0U1RQI7 1052 aa22.4■■□□□ 1.18
SS18-208ENST00000577751 ZBTB43O43298 467 aa22.4■■□□□ 1.18
SS18-208ENST00000577751 AKR1A1P14550 325 aa22.4■■□□□ 1.18
SS18-208ENST00000577751 ALDH5A1P51649 535 aaPredicted RBP22.4■■□□□ 1.18
SS18-208ENST00000577751 TMTC3Q6ZXV5 915 aa22.4■■□□□ 1.18
SS18-208ENST00000577751 CMTR1Q8N1G2 835 aaKnown RBP22.4■■□□□ 1.18
SS18-208ENST00000577751 DNERQ8NFT8 737 aa22.4■■□□□ 1.18
SS18-208ENST00000577751 LRRC37A2A6NM11 1700 aa22.4■■□□□ 1.18
SS18-208ENST00000577751 SEC24BO95487 1268 aa22.39■■□□□ 1.17
SS18-208ENST00000577751 FGD1P98174 961 aa22.39■■□□□ 1.17
SS18-208ENST00000577751 ANO1Q5XXA6 986 aa22.39■■□□□ 1.17
SS18-208ENST00000577751 SAMD3Q8N6K7 520 aa22.39■■□□□ 1.17
SS18-208ENST00000577751 SYTL5Q8TDW5 730 aaPredicted RBP22.39■■□□□ 1.17
SS18-208ENST00000577751 DIS3LQ8TF46 1054 aaKnown RBP22.39■■□□□ 1.17
SS18-208ENST00000577751 BRF1Q92994 677 aa22.39■■□□□ 1.17
SS18-208ENST00000577751 RRP36Q96EU6 259 aaKnown RBP22.39■■□□□ 1.17
SS18-208ENST00000577751 PAWRQ96IZ0 340 aaKnown RBP22.39■■□□□ 1.17
SS18-208ENST00000577751 FAM217BQ9NTX9 383 aaPredicted RBP22.39■■□□□ 1.17
SS18-208ENST00000577751 RBM28Q9NW13 759 aaKnown RBP22.39■■□□□ 1.17
SS18-208ENST00000577751 MAP3K20Q9NYL2 800 aaKnown RBP22.39■■□□□ 1.17
SS18-208ENST00000577751 EVCP57679 992 aa22.38■■□□□ 1.17
SS18-208ENST00000577751 ANAPC15P60006 121 aa22.38■■□□□ 1.17
SS18-208ENST00000577751 APOBRQ0VD83 1088 aa22.38■■□□□ 1.17
SS18-208ENST00000577751 IL17RAQ96F46 866 aa22.38■■□□□ 1.17
SS18-208ENST00000577751 ZHX1Q9UKY1 873 aaPredicted RBP22.38■■□□□ 1.17
SS18-208ENST00000577751 FAM184BQ9ULE4 1060 aa22.38■■□□□ 1.17
SS18-208ENST00000577751 CYP46A1Q9Y6A2 500 aa22.38■■□□□ 1.17
SS18-208ENST00000577751 DDX49Q9Y6V7 483 aaKnown RBP22.38■■□□□ 1.17
SS18-208ENST00000577751 COL6A1P12109 1028 aa22.37■■□□□ 1.17
SS18-208ENST00000577751 EDNRBP24530 442 aa22.37■■□□□ 1.17
SS18-208ENST00000577751 HSD17B4P51659 736 aa22.37■■□□□ 1.17
SS18-208ENST00000577751 FUT2Q10981 343 aa22.37■■□□□ 1.17
SS18-208ENST00000577751 PPP2R5BQ15173 497 aa22.37■■□□□ 1.17
SS18-208ENST00000577751 RTN1Q16799 776 aa22.37■■□□□ 1.17
SS18-208ENST00000577751 CCDC144BQ3MJ40 725 aa22.37■■□□□ 1.17
SS18-208ENST00000577751 NECAB2Q7Z6G3 386 aa22.37■■□□□ 1.17
SS18-208ENST00000577751 PIBF1Q8WXW3 757 aa22.37■■□□□ 1.17
SS18-208ENST00000577751 COL20A1Q9P218 1284 aa22.37■■□□□ 1.17
SS18-208ENST00000577751 NID2Q14112 1375 aa22.37■■□□□ 1.17
SS18-208ENST00000577751 RARBP10826 455 aa22.36■■□□□ 1.17
SS18-208ENST00000577751 CDC27P30260 824 aa22.36■■□□□ 1.17
SS18-208ENST00000577751 C8orf34Q49A92 452 aa22.36■■□□□ 1.17
SS18-208ENST00000577751 ARRDC4Q8NCT1 418 aa22.36■■□□□ 1.17
SS18-208ENST00000577751 TAAR1Q96RJ0 339 aa22.36■■□□□ 1.17
SS18-208ENST00000577751 CNTNAP5Q8WYK1 1306 aa22.35■■□□□ 1.17
SS18-208ENST00000577751 GOLGA8AA7E2F4 631 aa22.35■■□□□ 1.17
SS18-208ENST00000577751 GOLGA8BA8MQT2 603 aa22.35■■□□□ 1.17
SS18-208ENST00000577751 DNM1LO00429 736 aa22.35■■□□□ 1.17
SS18-208ENST00000577751 ADCY6O43306 1168 aa22.35■■□□□ 1.17
SS18-208ENST00000577751 CFBP00751 764 aa22.35■■□□□ 1.17
SS18-208ENST00000577751 TOB2Q14106 344 aaPredicted RBP22.35■■□□□ 1.17
SS18-208ENST00000577751 TAPT1Q6NXT6 567 aa22.35■■□□□ 1.17
SS18-208ENST00000577751 CCDC82Q8N4S0 544 aa22.35■■□□□ 1.17
SS18-208ENST00000577751 UPF3BQ9BZI7 483 aaKnown RBP22.35■■□□□ 1.17
SS18-208ENST00000577751 VTA1Q9NP79 307 aa22.35■■□□□ 1.17
SS18-208ENST00000577751 XPNPEP3Q9NQH7 507 aa22.35■■□□□ 1.17
SS18-208ENST00000577751 SEC63Q9UGP8 760 aaKnown RBP22.35■■□□□ 1.17
SS18-208ENST00000577751 DUSP11O75319 330 aaKnown RBP22.34■■□□□ 1.17
SS18-208ENST00000577751 NSUN6Q8TEA1 469 aaKnown RBP22.34■■□□□ 1.17
SS18-208ENST00000577751 MPHOSPH6Q99547 160 aaKnown RBP22.34■■□□□ 1.17
SS18-208ENST00000577751 C11orf49Q9H6J7 331 aa22.34■■□□□ 1.17
SS18-208ENST00000577751 PDE4DIPQ5VU43 2346 aa22.34■■□□□ 1.17
SS18-208ENST00000577751 ADAMTS4O75173 837 aa22.33■■□□□ 1.17
SS18-208ENST00000577751 ADD1P35611 737 aaKnown RBP22.33■■□□□ 1.17
SS18-208ENST00000577751 METAP2P50579 478 aaKnown RBP eCLIP22.33■■□□□ 1.17
SS18-208ENST00000577751 LRRC41Q15345 812 aa22.33■■□□□ 1.17
SS18-208ENST00000577751 IQSEC1Q6DN90 963 aa22.33■■□□□ 1.17
SS18-208ENST00000577751 EEPD1Q7L9B9 569 aa22.33■■□□□ 1.17
SS18-208ENST00000577751 LENG1Q96BZ8 264 aaPredicted RBP22.33■■□□□ 1.17
SS18-208ENST00000577751 RMDN3Q96TC7 470 aa22.33■■□□□ 1.17
SS18-208ENST00000577751 HTATIP2Q9BUP3 242 aa22.33■■□□□ 1.17
SS18-208ENST00000577751 PDGFCQ9NRA1 345 aa22.33■■□□□ 1.17
SS18-208ENST00000577751 ALPK3Q96L96 1907 aa22.32■■□□□ 1.16
SS18-208ENST00000577751 CCDC196A0A1B0GTZ2 297 aa22.32■■□□□ 1.16
SS18-208ENST00000577751 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.32■■□□□ 1.16
SS18-208ENST00000577751 RBM47A0AV96 593 aaKnown RBP22.32■■□□□ 1.16
SS18-208ENST00000577751 B4DLN1 442 aa22.32■■□□□ 1.16
SS18-208ENST00000577751 PGK1P00558 417 aa22.32■■□□□ 1.16
SS18-208ENST00000577751 PDIA3P30101 505 aaKnown RBP22.32■■□□□ 1.16
SS18-208ENST00000577751 ADCYAP1R1P41586 468 aa22.32■■□□□ 1.16
SS18-208ENST00000577751 MRPL12P52815 198 aaKnown RBP22.32■■□□□ 1.16
SS18-208ENST00000577751 GJC2Q5T442 439 aaPredicted RBP22.32■■□□□ 1.16
SS18-208ENST00000577751 FBXO16Q8IX29 292 aaPredicted RBP22.32■■□□□ 1.16
SS18-208ENST00000577751 IWS1Q96ST2 819 aa22.32■■□□□ 1.16
SS18-208ENST00000577751 PDRG1Q9NUG6 133 aa22.32■■□□□ 1.16
SS18-208ENST00000577751 NAP1L2Q9ULW6 460 aaPredicted RBP22.32■■□□□ 1.16
SS18-208ENST00000577751 SYNRGQ9UMZ2 1314 aa22.31■■□□□ 1.16
SS18-208ENST00000577751 hCG_1642624A0A1W2PR95 340 aa22.31■■□□□ 1.16
SS18-208ENST00000577751 GCOM1H8Y6P7 765 aaPredicted RBP22.31■■□□□ 1.16
SS18-208ENST00000577751 POLR2MP0CAP2 368 aa22.31■■□□□ 1.16
SS18-208ENST00000577751 NKX3-2P78367 333 aa22.31■■□□□ 1.16
SS18-208ENST00000577751 TNFAIP2Q03169 654 aa22.31■■□□□ 1.16
SS18-208ENST00000577751 PDE4DQ08499 809 aa22.31■■□□□ 1.16
SS18-208ENST00000577751 KLHDC9Q8NEP7 349 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms