RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 TIFAQ96CG3 184 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 DDX11Q96FC9 970 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 PHOX2BQ99453 314 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 GAS2L1Q99501 681 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 ZNF576Q9H609 170 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 GOPCQ9HD26 462 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 FBXO28Q9NVF7 368 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 FAM184BQ9ULE4 1060 aa8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 DIS3Q9Y2L1 958 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-212ENST00000577721 USP17L12C9JPN9 530 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 USP17L21D6R901 530 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 VWA5AO00534 786 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 PRKAB2O43741 272 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 ARHGEF15O94989 841 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 ZIC2O95409 532 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 TIMP1P01033 207 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 CCNYL3P0C7X3 344 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 ZNF865P0CJ78 1059 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 COPB2P35606 906 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 CDK8P49336 464 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 ACLYP53396 1101 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 FAAP100Q0VG06 881 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 KCNA10Q16322 511 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 LINC01559Q495D7 138 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 FAM83BQ5T0W9 1011 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 CEP85Q6P2H3 762 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 CCDC174Q6PII3 467 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 RHPN1Q8TCX5 695 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 HLA-CQ95604 372 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 LENG1Q96BZ8 264 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 TSEN34Q9BSV6 310 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 KLF16Q9BXK1 252 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 KANSL2Q9H9L4 492 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 SPC25Q9HBM1 224 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 ATP8A2Q9NTI2 1148 aa8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 ZHX1Q9UKY1 873 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1-212ENST00000577721 COL6A3P12111 3177 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 CYP2D7A0A087X1C5 515 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 MOXD2PA6NHM9 499 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 MBD4O95243 580 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 C6orf222P0C671 652 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 IGFBP4P22692 258 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 PPIGQ13427 754 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 CCDC85BQ15834 202 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 SLFNL1Q499Z3 407 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 C12orf60Q5U649 245 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 ANKRD33Q7Z3H0 272 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 RETREG3Q86VR2 466 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 CPXCR1Q8N123 301 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 TMEM199Q8N511 208 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 USP38Q8NB14 1042 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 IL27Q8NEV9 243 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 BAP1Q92560 729 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 GLT1D1Q96MS3 346 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 TOX2Q96NM4 488 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.23□□□□□ -1.093e-7■■■□□ 15.4
SMARCE1-212ENST00000577721 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 BOLA2Q9H3K6 86 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 PPP1R9AQ9ULJ8 1098 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 SLC4A4Q9Y6R1 1079 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 SIPA1L1O43166 1804 aa8.23□□□□□ -1.09
SMARCE1-212ENST00000577721 LAMA3Q16787 3333 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 TCRBV5S4A2TA0A5A2 114 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 GRXCR1A8MXD5 290 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 TLR3O15455 904 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 HOXA2O43364 376 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 ZBED4O75132 1171 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 ADAMTS4O75173 837 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 ACRP10323 421 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 RLBP1P12271 317 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 GNASQ5JWF2 1037 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 SNRNP48Q6IEG0 339 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 MFSD5Q6N075 450 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 NOL8Q76FK4 1167 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 PCSK9Q8NBP7 692 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 GALNT6Q8NCL4 622 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 KLHDC9Q8NEP7 349 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 WHAMMQ8TF30 809 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 KIF1BPQ96EK5 621 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 SLF1Q9BQI6 1058 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 PPP1R12CQ9BZL4 782 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 PRDM12Q9H4Q4 367 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 MKNK2Q9HBH9 465 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 PAG1Q9NWQ8 432 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 MSRAQ9UJ68 235 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 ADAMTS5Q9UNA0 930 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 MROH7Q68CQ1 1323 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 SYNRGQ9UMZ2 1314 aa8.22□□□□□ -1.09
SMARCE1-212ENST00000577721 A0A0U1RQG5 324 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 MYADML2A6NDP7 307 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 CCER2I3L3R5 266 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 SMIM22K7EJ46 135 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ARVCFO00192 962 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 DUSP11O75319 330 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 SNAI1O95863 264 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ASGR1P07306 291 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 MS4A1P11836 297 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms