RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 C2orf71A6NGG8 1288 aa8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 OTOL1A6NHN0 477 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 BUD31P41223 144 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 SEPHS1P49903 392 aa8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 PRR5P85299 388 aa8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 RBM10P98175 930 aaKnown RBP8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 PPP2R5EQ16537 467 aa8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 DPY19L1Q2PZI1 675 aa8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 C9orf131Q5VYM1 1079 aa8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 ZNF513Q8N8E2 541 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 TP53I13Q8NBR0 393 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 CPLX3Q8WVH0 158 aa8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 KRTAP4-2Q9BYR5 136 aa8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 TGIF2Q9GZN2 237 aa8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 KIAA1522Q9P206 1035 aaPredicted RBP8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 STRIP2Q9ULQ0 834 aa8.03□□□□□ -1.12
SMCHD1-202ENST00000577300 TRBV23OR9-2A0A075B6M9 112 aa8.02□□□□□ -1.13
SMCHD1-202ENST00000577300 ZC3H12DA2A288 527 aaKnown RBP8.02□□□□□ -1.13
SMCHD1-202ENST00000577300 ANKRD34BA5PLL1 514 aa8.02□□□□□ -1.13
SMCHD1-202ENST00000577300 FOXD2O60548 495 aaPredicted RBP8.02□□□□□ -1.13
SMCHD1-202ENST00000577300 LIMS1P48059 325 aa8.02□□□□□ -1.13
SMCHD1-202ENST00000577300 KIAA1211LQ6NV74 962 aa8.02□□□□□ -1.13
SMCHD1-202ENST00000577300 CABP7Q86V35 215 aa8.02□□□□□ -1.13
SMCHD1-202ENST00000577300 CXorf38Q8TB03 319 aa8.02□□□□□ -1.13
SMCHD1-202ENST00000577300 DBR1Q9UK59 544 aaKnown RBP8.02□□□□□ -1.13
SMCHD1-202ENST00000577300 FFAR3O14843 346 aa8.01□□□□□ -1.13
SMCHD1-202ENST00000577300 NCAM1P13591 858 aa8.01□□□□□ -1.13
SMCHD1-202ENST00000577300 VHLLQ6RSH7 139 aa8.01□□□□□ -1.13
SMCHD1-202ENST00000577300 LZTR1Q8N653 840 aa8.01□□□□□ -1.13
SMCHD1-202ENST00000577300 FAM169BQ8N8A8 192 aa8.01□□□□□ -1.13
SMCHD1-202ENST00000577300 NETO2Q8NC67 525 aa8.01□□□□□ -1.13
SMCHD1-202ENST00000577300 FEZF2Q8TBJ5 459 aa8.01□□□□□ -1.13
SMCHD1-202ENST00000577300 TSPAN17Q96FV3 270 aa8.01□□□□□ -1.13
SMCHD1-202ENST00000577300 PLA2G2DQ9UNK4 145 aa8.01□□□□□ -1.13
SMCHD1-202ENST00000577300 SUGT1Q9Y2Z0 365 aa8.01□□□□□ -1.13
SMCHD1-202ENST00000577300 ATF2P15336 505 aa8□□□□□ -1.13
SMCHD1-202ENST00000577300 SYN1P17600 705 aa8□□□□□ -1.13
SMCHD1-202ENST00000577300 PAMP19021 973 aa8□□□□□ -1.13
SMCHD1-202ENST00000577300 ZNF143P52747 638 aaPredicted RBP8□□□□□ -1.13
SMCHD1-202ENST00000577300 FOXO4P98177 505 aa8□□□□□ -1.13
SMCHD1-202ENST00000577300 TRIM26Q12899 539 aaPredicted RBP8□□□□□ -1.13
SMCHD1-202ENST00000577300 MTA3Q9BTC8 594 aa8□□□□□ -1.13
SMCHD1-202ENST00000577300 AKT3Q9Y243 479 aa8□□□□□ -1.13
SMCHD1-202ENST00000577300 RWDD3Q9Y3V2 267 aa8□□□□□ -1.13
SMCHD1-202ENST00000577300 HTRA3P83110 453 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 VWA3BQ502W6 1294 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 LCE5AQ5TCM9 118 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 CPNE8Q86YQ8 564 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 HOMEZQ8IX15 550 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 CRACR2BQ8N4Y2 399 aaPredicted RBP7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 FNIP1Q8TF40 1166 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 ALG3Q92685 438 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 KRTAP4-11Q9BYQ6 195 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 ACBD3Q9H3P7 528 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 FBLN5Q9UBX5 448 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 NUDT5Q9UKK9 219 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 EMC9Q9Y3B6 208 aa7.99□□□□□ -1.13
SMCHD1-202ENST00000577300 NPHP3-ACAD11A0A0J9YXS1 232 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 PPP1R11O60927 126 aaPredicted RBP7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 PLA2G1BP04054 148 aaKnown RBP7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 ASGR2P07307 311 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 NAT2P11245 290 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 SLC9A5Q14940 896 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 POMZP3Q6PJE2 187 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 SYT8Q8NBV8 401 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 COPS5Q92905 334 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 PEX11GQ96HA9 241 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 APBA2Q99767 749 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 APEX2Q9UBZ4 518 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 INPP5FQ9Y2H2 1132 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 FAN1Q9Y2M0 1017 aa7.98□□□□□ -1.13
SMCHD1-202ENST00000577300 UNCXA6NJT0 531 aa7.97□□□□□ -1.13
SMCHD1-202ENST00000577300 B3GNT8Q7Z7M8 397 aa7.97□□□□□ -1.13
SMCHD1-202ENST00000577300 SAPCD2Q86UD0 394 aa7.97□□□□□ -1.13
SMCHD1-202ENST00000577300 BVESQ8NE79 360 aa7.97□□□□□ -1.13
SMCHD1-202ENST00000577300 TEPSINQ96N21 525 aa7.97□□□□□ -1.13
SMCHD1-202ENST00000577300 MMP19Q99542 508 aa7.97□□□□□ -1.13
SMCHD1-202ENST00000577300 KRTAP9-3Q9BYQ3 159 aa7.97□□□□□ -1.13
SMCHD1-202ENST00000577300 GULP1Q9UBP9 304 aa7.97□□□□□ -1.13
SMCHD1-202ENST00000577300 PMF1-BGLAPU3KQ54 211 aa7.97□□□□□ -1.13
SMCHD1-202ENST00000577300 C7orf72A4D263 438 aa7.96□□□□□ -1.14
SMCHD1-202ENST00000577300 NPHS1O60500 1241 aa7.96□□□□□ -1.14
SMCHD1-202ENST00000577300 ZBTB7AO95365 584 aa7.96□□□□□ -1.14
SMCHD1-202ENST00000577300 SLURP1P55000 103 aa7.96□□□□□ -1.14
SMCHD1-202ENST00000577300 NCAPHQ15003 741 aa7.96□□□□□ -1.14
SMCHD1-202ENST00000577300 FRMD5Q7Z6J6 570 aa7.96□□□□□ -1.14
SMCHD1-202ENST00000577300 ZDHHC14Q8IZN3 488 aa7.96□□□□□ -1.14
SMCHD1-202ENST00000577300 CPA5Q8WXQ8 436 aa7.96□□□□□ -1.14
SMCHD1-202ENST00000577300 CCSER2Q9H7U1 834 aa7.96□□□□□ -1.14
SMCHD1-202ENST00000577300 RXFP1Q9HBX9 757 aa7.96□□□□□ -1.14
SMCHD1-202ENST00000577300 SH3D21A4FU49 640 aa7.95□□□□□ -1.14
SMCHD1-202ENST00000577300 KCNH1O95259 989 aa7.95□□□□□ -1.14
SMCHD1-202ENST00000577300 ATF4P18848 351 aaPredicted RBP7.95□□□□□ -1.14
SMCHD1-202ENST00000577300 PMLP29590 882 aa7.95□□□□□ -1.14
SMCHD1-202ENST00000577300 MC3RP41968 323 aa7.95□□□□□ -1.14
SMCHD1-202ENST00000577300 KCNC1P48547 511 aa7.95□□□□□ -1.14
SMCHD1-202ENST00000577300 WWC2Q6AWC2 1192 aa7.95□□□□□ -1.14
SMCHD1-202ENST00000577300 LIPIQ6XZB0 460 aa7.95□□□□□ -1.14
SMCHD1-202ENST00000577300 ANAPC16Q96DE5 110 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms