RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PTPRFP10586 1907 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 TNPO2O14787 897 aaKnown RBP7.59□□□□□ -1.19
NUP88-212ENST00000576708 IDH1O75874 414 aaKnown RBP7.59□□□□□ -1.19
NUP88-212ENST00000576708 BAG3O95817 575 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 MAP4K4O95819 1239 aaPredicted RBP7.59□□□□□ -1.19
NUP88-212ENST00000576708 ABL1P00519 1130 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 CYP7A1P22680 504 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 SERPINB4P48594 390 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 CEP85Q6P2H3 762 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 MIGA1Q8NAN2 632 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 GTF3C2Q8WUA4 911 aaPredicted RBP7.59□□□□□ -1.19
NUP88-212ENST00000576708 GTPBP3Q969Y2 492 aaKnown RBP7.59□□□□□ -1.19
NUP88-212ENST00000576708 COL26A1Q96A83 441 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 ZNF837Q96EG3 531 aaPredicted RBP7.59□□□□□ -1.19
NUP88-212ENST00000576708 BCL11AQ9H165 835 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 IL1RAPL2Q9NP60 686 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 PI4KBQ9UBF8 816 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 SLC45A1Q9Y2W3 748 aa7.59□□□□□ -1.19
NUP88-212ENST00000576708 MYO5AQ9Y4I1 1855 aaKnown RBP7.59□□□□□ -1.19
NUP88-212ENST00000576708 MGAMO43451 1857 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 COL2A1P02458 1487 aaPredicted RBP7.58□□□□□ -1.2
NUP88-212ENST00000576708 GJB1P08034 283 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 GJA8P48165 433 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 UBXN2AP68543 259 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 ZNF211Q13398 564 aaPredicted RBP7.58□□□□□ -1.2
NUP88-212ENST00000576708 EFHC2Q5JST6 749 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 C16orf46Q6P387 395 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 AACSQ86V21 672 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 TRIM22Q8IYM9 498 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 CRACR2BQ8N4Y2 399 aaPredicted RBP7.58□□□□□ -1.2
NUP88-212ENST00000576708 MAGEB6Q8N7X4 407 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 U2AF1L4Q8WU68 220 aaKnown RBP7.58□□□□□ -1.2
NUP88-212ENST00000576708 DPF3Q92784 378 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 ZNF512BQ96KM6 892 aaPredicted RBP7.58□□□□□ -1.2
NUP88-212ENST00000576708 P2RX7Q99572 595 aaKnown RBP7.58□□□□□ -1.2
NUP88-212ENST00000576708 ASCC2Q9H1I8 757 aaPredicted RBP7.58□□□□□ -1.2
NUP88-212ENST00000576708 CRISPLD1Q9H336 500 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 NEUROD4Q9HD90 331 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 HERC5Q9UII4 1024 aaKnown RBP7.58□□□□□ -1.2
NUP88-212ENST00000576708 MAST2Q6P0Q8 1798 aa7.58□□□□□ -1.2
NUP88-212ENST00000576708 ATAD5Q96QE3 1844 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 TERTO14746 1132 aaKnown RBP7.57□□□□□ -1.2
NUP88-212ENST00000576708 SGPL1O95470 568 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 BACE1P56817 501 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 UBE2Q1Q7Z7E8 422 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 FOXP4Q8IVH2 680 aaPredicted RBP7.57□□□□□ -1.2
NUP88-212ENST00000576708 COA7Q96BR5 231 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 GCC1Q96CN9 775 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 MYO19Q96H55 970 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 SUSD3Q96L08 255 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 DEFB118Q96PH6 123 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 WDR18Q9BV38 432 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 DHX36Q9H2U1 1008 aaKnown RBP7.57□□□□□ -1.2
NUP88-212ENST00000576708 AS3MTQ9HBK9 375 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 TXNRD2Q9NNW7 524 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 GJD2Q9UKL4 321 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 ZBTB21Q9ULJ3 1066 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 DNMT3AQ9Y6K1 912 aaPredicted RBP7.57□□□□□ -1.2
NUP88-212ENST00000576708 CDK5RAP2Q96SN8 1893 aa7.57□□□□□ -1.2
NUP88-212ENST00000576708 LOC285556D6RIA3 1793 aa7.56□□□□□ -1.2
NUP88-212ENST00000576708 H3BM21 787 aa7.56□□□□□ -1.2
NUP88-212ENST00000576708 FARP2O94887 1054 aaPredicted RBP7.56□□□□□ -1.2
NUP88-212ENST00000576708 GH2P01242 217 aa7.56□□□□□ -1.2
NUP88-212ENST00000576708 TFRCP02786 760 aaKnown RBP7.56□□□□□ -1.2
NUP88-212ENST00000576708 ASNSP08243 561 aa7.56□□□□□ -1.2
NUP88-212ENST00000576708 USP5P45974 858 aa7.56□□□□□ -1.2
NUP88-212ENST00000576708 GCLCP48506 637 aaPredicted RBP7.56□□□□□ -1.2
NUP88-212ENST00000576708 FXR1P51114 621 aaKnown RBP eCLIP7.56□□□□□ -1.2
NUP88-212ENST00000576708 ZYXQ15942 572 aaKnown RBP7.56□□□□□ -1.2
NUP88-212ENST00000576708 FAM110CQ1W6H9 321 aa7.56□□□□□ -1.2
NUP88-212ENST00000576708 C11orf91Q3C1V1 193 aa7.56□□□□□ -1.2
NUP88-212ENST00000576708 FAM26DQ5JW98 314 aa7.56□□□□□ -1.2
NUP88-212ENST00000576708 METTL16Q86W50 562 aaKnown RBP7.56□□□□□ -1.2
NUP88-212ENST00000576708 SIRT2Q8IXJ6 389 aa7.56□□□□□ -1.2
NUP88-212ENST00000576708 EDC3Q96F86 508 aaKnown RBP7.56□□□□□ -1.2
NUP88-212ENST00000576708 ZCCHC2Q9C0B9 1178 aaKnown RBP7.56□□□□□ -1.2
NUP88-212ENST00000576708 TMOD4Q9NZQ9 345 aa7.56□□□□□ -1.2
NUP88-212ENST00000576708 RBPJLQ9UBG7 517 aa7.56□□□□□ -1.2
NUP88-212ENST00000576708 ZBED9Q6R2W3 1325 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 TNFRSF10BO14763 440 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 CHGBP05060 677 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 HLA-DOAP06340 250 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 CYP2B6P20813 491 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 HOXA7P31268 230 aaPredicted RBP7.55□□□□□ -1.2
NUP88-212ENST00000576708 PLCD1P51178 756 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 HERVK_113P62684 666 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 IRX3P78415 501 aaPredicted RBP7.55□□□□□ -1.2
NUP88-212ENST00000576708 PABPC4Q13310 644 aaKnown RBP eCLIP7.55□□□□□ -1.2
NUP88-212ENST00000576708 SV2AQ7L0J3 742 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 GPR161Q8N6U8 529 aaKnown RBP7.55□□□□□ -1.2
NUP88-212ENST00000576708 ACER1Q8TDN7 264 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 DIS3LQ8TF46 1054 aaKnown RBP7.55□□□□□ -1.2
NUP88-212ENST00000576708 IFT43Q96FT9 208 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 RIOK1Q9BRS2 568 aaKnown RBP7.55□□□□□ -1.2
NUP88-212ENST00000576708 PAGR1Q9BTK6 254 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.55□□□□□ -1.2
NUP88-212ENST00000576708 MORF4L1Q9UBU8 362 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 MTMR7Q9Y216 660 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 FOCADQ5VW36 1801 aa7.55□□□□□ -1.2
NUP88-212ENST00000576708 LOC100996750A0A140TA64 210 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms