RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ADAM9Q13443 819 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 RASGRP4Q8TDF6 673 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 CXorf56Q9H5V9 222 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 MLH3Q9UHC1 1453 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 EFCAB6Q5THR3 1501 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 NBPF9Q3BBW0 867 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 TBC1D1Q86TI0 1168 aaPredicted RBP14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 KIFAP3Q92845 792 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 PBKQ96KB5 322 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 MMS19Q96T76 1030 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 TRIM6Q9C030 488 aaPredicted RBP14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 NDST4Q9H3R1 872 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 BZW2Q9Y6E2 419 aaKnown RBP14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 MEFVO15553 781 aaPredicted RBP14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 SMIM24O75264 130 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 GCNT3O95395 438 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 BCRP11274 1271 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 WDR66Q8TBY9 1149 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 ANKRD2Q9GZV1 360 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 QRICH2Q9H0J4 1663 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 GLI2P10070 1586 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 ARHGEF40Q8TER5 1519 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 TMEM2Q9UHN6 1383 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 BCAMP50895 628 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 PLTPP55058 493 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 ZNF804AQ7Z570 1209 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 SMCR8Q8TEV9 937 aaPredicted RBP14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 RUNDC3BQ96NL0 473 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 PANK4Q9NVE7 773 aa14.38□□□□□ -0.11
PCDHGB3-201ENST00000576222 LAD1O00515 517 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 PRPF3O43395 683 aaKnown RBP14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 CDC27P30260 824 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 CUL1Q13616 776 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 PARP10Q53GL7 1025 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 BEND6Q5SZJ8 279 aaPredicted RBP14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 NLRP14Q86W24 1093 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 GPBP1Q86WP2 473 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 TEX11Q8IYF3 940 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 ZFYVE16Q7Z3T8 1539 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 WDR19Q8NEZ3 1342 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 STK36Q9NRP7 1315 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 GMNCA6NCL1 334 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 TRIM49BA6NDI0 452 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 NR1I3Q14994 352 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 AK8Q96MA6 479 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 SETDB2Q96T68 719 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 GREM2Q9H772 168 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 SYNCQ9H7C4 482 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 KLC4Q9NSK0 619 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 PRKAB2O43741 272 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 KIF1CO43896 1103 aaKnown RBP14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 FKBP3Q00688 224 aaKnown RBP14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 ZKSCAN8Q15776 578 aaPredicted RBP14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 CCDC13Q8IYE1 715 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 NOA1Q8NC60 698 aaKnown RBP14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 OSBPL9Q96SU4 736 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 ARPP21Q9UBL0 812 aaPredicted RBP14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 TROVE2P10155 538 aaKnown RBP eCLIP14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 KRT5P13647 590 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 SESN3P58005 492 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 CYB5R4Q7L1T6 521 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 TBC1D10CQ8IV04 446 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 SREK1Q8WXA9 508 aaKnown RBP14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 CRB1P82279 1406 aa14.37□□□□□ -0.11
PCDHGB3-201ENST00000576222 F8W031 263 aaPredicted RBP14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 EIF3HO15372 352 aaKnown RBP eCLIP14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 EXOC3O60645 756 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 PRCPP42785 496 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 EIF3BP55884 814 aaKnown RBP14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 EXOC3L4Q17RC7 722 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 MAGOHBQ96A72 148 aaKnown RBP14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 MLXIPQ9HAP2 919 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 HPCAL4Q9UM19 191 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 ESYT3A0FGR9 886 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 IRAK1P51617 712 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 PHLDB3Q6NSJ2 640 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 MAIP1Q8WWC4 291 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 PCP11498 1178 aaKnown RBP14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 FXR1P51114 621 aaKnown RBP eCLIP14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 BIRC3Q13489 604 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 ARL6IP4Q66PJ3 421 aaKnown RBP14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 NFRKBQ6P4R8 1299 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 CCNI2Q6ZMN8 369 aaPredicted RBP14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 PHLDB2Q86SQ0 1253 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 SPATA4Q8NEY3 305 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 KCNB2Q92953 911 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 CHP1Q99653 195 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 NOP53Q9NZM5 478 aaKnown RBP14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 PCDHA4Q9UN74 947 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 KDM3AQ9Y4C1 1321 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 SERPING1P05155 500 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 LTKP29376 864 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 EIF6P56537 245 aaKnown RBP14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 LARP4BQ92615 738 aaKnown RBP14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 FMO2Q99518 471 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 SLC24A3Q9HC58 644 aa14.36□□□□□ -0.11
PCDHGB3-201ENST00000576222 RIC8AQ9NPQ8 531 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms