RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 CLRN2A0PK11 232 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 SFI1A8K8P3 1242 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 BUB1O43683 1085 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 PLEKP08567 350 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-215ENST00000575112 PLCG1P19174 1290 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 HERVK_113P62684 666 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 GPSM2P81274 684 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 TROAPQ12815 778 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 CDKAL1Q5VV42 579 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 CEP112Q8N8E3 955 aa9.5□□□□□ -0.89
RPAIN-215ENST00000575112 PROCA1Q8NCQ7 364 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-215ENST00000575112 DDX60Q8IY21 1712 aaKnown RBP9.5□□□□□ -0.89
RPAIN-215ENST00000575112 TMCO5BA8MYB1 307 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 CALML3P27482 149 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 MAGEA9P43362 315 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 CDK8P49336 464 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 CORO7P57737 925 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 IL17AQ16552 155 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 SPATA1Q5VX52 437 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 CCDC84Q86UT8 332 aaPredicted RBP9.49□□□□□ -0.89
RPAIN-215ENST00000575112 SH2D3CQ8N5H7 860 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 SPATA20Q8TB22 786 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 RIOK1Q9BRS2 568 aaKnown RBP9.49□□□□□ -0.89
RPAIN-215ENST00000575112 HOMER2Q9NSB8 354 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 DMGDHQ9UI17 866 aaKnown RBP9.49□□□□□ -0.89
RPAIN-215ENST00000575112 GOLGA6L9A6NEM1 432 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 SPA17Q15506 151 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 PKN1Q16512 942 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 TXNRD1Q16881 649 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 KCTD16Q68DU8 428 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 WDR59Q6PJI9 974 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 C2CD5Q86YS7 1000 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 CCDC155Q8N6L0 562 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 TDP2O95551 362 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 COPB1P53618 953 aaKnown RBP9.49□□□□□ -0.89
RPAIN-215ENST00000575112 DCAF17Q5H9S7 520 aaPredicted RBP9.49□□□□□ -0.89
RPAIN-215ENST00000575112 IRF2BP1Q8IU81 584 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 WDR66Q8TBY9 1149 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 CCDC42Q96M95 316 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 FAM107BQ9H098 131 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 TSPYL1Q9H0U9 437 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 KCNQ5Q9NR82 932 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 PCDHAC2Q9Y5I4 1007 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 ABCC12Q96J65 1359 aa9.49□□□□□ -0.89
RPAIN-215ENST00000575112 RIC1Q4ADV7 1423 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 ZSCAN5CA6NGD5 496 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-215ENST00000575112 PRPF3O43395 683 aaKnown RBP9.48□□□□□ -0.89
RPAIN-215ENST00000575112 HOXA13P31271 388 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-215ENST00000575112 NONOQ15233 471 aaKnown RBP eCLIP9.48□□□□□ -0.89
RPAIN-215ENST00000575112 SHROOM1Q2M3G4 852 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-215ENST00000575112 RRAGAQ7L523 313 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 REXO1Q8N1G1 1221 aaKnown RBP9.48□□□□□ -0.89
RPAIN-215ENST00000575112 CCDC43Q96MW1 224 aaKnown RBP9.48□□□□□ -0.89
RPAIN-215ENST00000575112 SPATA31A1Q5TZJ5 1347 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 TJP1Q07157 1748 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 PRPF4BQ13523 1007 aaKnown RBP9.48□□□□□ -0.89
RPAIN-215ENST00000575112 TMEM266Q2M3C6 531 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 HERC4Q5GLZ8 1057 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-215ENST00000575112 TCEAL9Q9UHQ7 104 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 SCN11AQ9UI33 1791 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 NDUFA10O95299 355 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 ATP1A2P50993 1020 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 PRKG1Q13976 671 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 CALCRLQ16602 461 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 KRT79Q5XKE5 535 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 CCDC174Q6PII3 467 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 KCNV1Q6PIU1 500 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 POTEDQ86YR6 584 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 CPXCR1Q8N123 301 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 FAM71BQ8TC56 605 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 AFAP1L1Q8TED9 768 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 ZNF384Q8TF68 577 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 ARL8AQ96BM9 186 aa9.48□□□□□ -0.89
RPAIN-215ENST00000575112 LAMB4A4D0S4 1761 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 TCP10L2B9ZVM9 353 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 ERLIN1O75477 346 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 STAT3P40763 770 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 SLC1A4P43007 532 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 TRADDQ15628 312 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 CHADLQ6NUI6 762 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 LRRC15Q8TF66 581 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 COG1Q8WTW3 980 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 SELENOOQ9BVL4 669 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 EFCC1Q9HA90 598 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 ZNF287Q9HBT7 754 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 CD209Q9NNX6 404 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 ARPP21Q9UBL0 812 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-215ENST00000575112 EPN1Q9Y6I3 576 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-215ENST00000575112 NPHP3-ACAD11A0A0J9YXS1 232 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 CFBP00751 764 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 USP14P54578 494 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 RAPGEF1Q13905 1077 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 TRAPPC11Q7Z392 1133 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 TMC4Q7Z404 712 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 SEPT12Q8IYM1 358 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 TSEN2Q8NCE0 465 aaKnown RBP9.47□□□□□ -0.89
RPAIN-215ENST00000575112 CCDC148Q8NFR7 591 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 IFT81Q8WYA0 676 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 FERMT2Q96AC1 680 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 ATP8A2Q9NTI2 1148 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms