RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 ARMCX2Q7L311 632 aa28.06■■■□□ 2.08
LITAF-213ENST00000574701 U2AF1L4Q8WU68 220 aaKnown RBP28.06■■■□□ 2.08
LITAF-213ENST00000574701 ZNF274Q96GC6 653 aaPredicted RBP28.06■■■□□ 2.08
LITAF-213ENST00000574701 ALDH8A1Q9H2A2 487 aaPredicted RBP28.06■■■□□ 2.08
LITAF-213ENST00000574701 CFBP00751 764 aa28.05■■■□□ 2.08
LITAF-213ENST00000574701 GJA8P48165 433 aa28.05■■■□□ 2.08
LITAF-213ENST00000574701 KIAA0100Q14667 2235 aaKnown RBP28.05■■■□□ 2.08
LITAF-213ENST00000574701 SAMD3Q8N6K7 520 aa28.05■■■□□ 2.08
LITAF-213ENST00000574701 FAM217BQ9NTX9 383 aaPredicted RBP28.05■■■□□ 2.08
LITAF-213ENST00000574701 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.05■■■□□ 2.08
LITAF-213ENST00000574701 MCM3APO60318 1980 aa28.04■■■□□ 2.08
LITAF-213ENST00000574701 LOC102724159A0A0B4J2E5 919 aa28.04■■■□□ 2.08
LITAF-213ENST00000574701 MSCO60682 206 aa28.04■■■□□ 2.08
LITAF-213ENST00000574701 CAPN2P17655 700 aa28.04■■■□□ 2.08
LITAF-213ENST00000574701 ADD1P35611 737 aaKnown RBP28.04■■■□□ 2.08
LITAF-213ENST00000574701 ALDH5A1P51649 535 aaPredicted RBP28.04■■■□□ 2.08
LITAF-213ENST00000574701 NEK4P51957 841 aa28.04■■■□□ 2.08
LITAF-213ENST00000574701 CCT2P78371 535 aaKnown RBP28.04■■■□□ 2.08
LITAF-213ENST00000574701 PWP2Q15269 919 aaKnown RBP28.04■■■□□ 2.08
LITAF-213ENST00000574701 MAP3K20Q9NYL2 800 aaKnown RBP28.04■■■□□ 2.08
LITAF-213ENST00000574701 hCG_1642624A0A1W2PR95 340 aa28.03■■■□□ 2.08
LITAF-213ENST00000574701 B4DLN1 442 aa28.03■■■□□ 2.08
LITAF-213ENST00000574701 SGPL1O95470 568 aa28.03■■■□□ 2.08
LITAF-213ENST00000574701 MRPL12P52815 198 aaKnown RBP28.03■■■□□ 2.08
LITAF-213ENST00000574701 PRAMEF19Q5SWL8 479 aa28.03■■■□□ 2.08
LITAF-213ENST00000574701 TRPV1Q8NER1 839 aa28.03■■■□□ 2.08
LITAF-213ENST00000574701 DNERQ8NFT8 737 aa28.03■■■□□ 2.08
LITAF-213ENST00000574701 LARP6Q9BRS8 491 aaKnown RBP28.03■■■□□ 2.08
LITAF-213ENST00000574701 RBM27Q9P2N5 1060 aaKnown RBP28.03■■■□□ 2.08
LITAF-213ENST00000574701 DDX20Q9UHI6 824 aaKnown RBP28.03■■■□□ 2.08
LITAF-213ENST00000574701 ZHX1Q9UKY1 873 aaPredicted RBP28.03■■■□□ 2.08
LITAF-213ENST00000574701 FRMPD3Q5JV73 1810 aa28.02■■■□□ 2.08
LITAF-213ENST00000574701 LRRC37A2A6NM11 1700 aa28.02■■■□□ 2.08
LITAF-213ENST00000574701 RBM25P49756 843 aaKnown RBP28.02■■■□□ 2.08
LITAF-213ENST00000574701 AK2P54819 239 aa28.02■■■□□ 2.08
LITAF-213ENST00000574701 AKAP17AQ02040 695 aaKnown RBP28.02■■■□□ 2.08
LITAF-213ENST00000574701 FUT2Q10981 343 aa28.02■■■□□ 2.08
LITAF-213ENST00000574701 HEATR3Q7Z4Q2 680 aa28.02■■■□□ 2.08
LITAF-213ENST00000574701 SYTL5Q8TDW5 730 aaPredicted RBP28.02■■■□□ 2.08
LITAF-213ENST00000574701 PURBQ96QR8 312 aaKnown RBP28.02■■■□□ 2.08
LITAF-213ENST00000574701 ABHD16BQ9H3Z7 469 aa28.02■■■□□ 2.08
LITAF-213ENST00000574701 GCOM1H8Y6P7 765 aaPredicted RBP28.01■■■□□ 2.07
LITAF-213ENST00000574701 hCG_1984214I3L0E3 225 aa28.01■■■□□ 2.07
LITAF-213ENST00000574701 CPLX1O14810 134 aa28.01■■■□□ 2.07
LITAF-213ENST00000574701 SEPT4O43236 478 aa28.01■■■□□ 2.07
LITAF-213ENST00000574701 SNAI1O95863 264 aaPredicted RBP28.01■■■□□ 2.07
LITAF-213ENST00000574701 TFRCP02786 760 aaKnown RBP28.01■■■□□ 2.07
LITAF-213ENST00000574701 POLR2MP0CAP2 368 aa28.01■■■□□ 2.07
LITAF-213ENST00000574701 EN2P19622 333 aaPredicted RBP28.01■■■□□ 2.07
LITAF-213ENST00000574701 GHRHRQ02643 423 aa28.01■■■□□ 2.07
LITAF-213ENST00000574701 STK3Q13188 491 aa28.01■■■□□ 2.07
LITAF-213ENST00000574701 CPLX2Q6PUV4 134 aaKnown RBP28.01■■■□□ 2.07
LITAF-213ENST00000574701 ZNF713Q8N859 430 aaPredicted RBP28.01■■■□□ 2.07
LITAF-213ENST00000574701 TBC1D5Q92609 795 aa28.01■■■□□ 2.07
LITAF-213ENST00000574701 V9GY48 417 aaPredicted RBP28.01■■■□□ 2.07
LITAF-213ENST00000574701 CENPFP49454 3210 aa28■■■□□ 2.07
LITAF-213ENST00000574701 ASTN1O14525 1302 aa28■■■□□ 2.07
LITAF-213ENST00000574701 OPLAHO14841 1288 aa28■■■□□ 2.07
LITAF-213ENST00000574701 HSD17B4P51659 736 aa28■■■□□ 2.07
LITAF-213ENST00000574701 CUL5Q93034 780 aa28■■■□□ 2.07
LITAF-213ENST00000574701 SLKQ9H2G2 1235 aaPredicted RBP28■■■□□ 2.07
LITAF-213ENST00000574701 NCOA5Q9HCD5 579 aaKnown RBP28■■■□□ 2.07
LITAF-213ENST00000574701 AKR1A1P14550 325 aa27.99■■■□□ 2.07
LITAF-213ENST00000574701 ACVR2BQ13705 512 aa27.99■■■□□ 2.07
LITAF-213ENST00000574701 NOL8Q76FK4 1167 aaKnown RBP27.99■■■□□ 2.07
LITAF-213ENST00000574701 GPKOWQ92917 476 aaPredicted RBP eCLIP27.99■■■□□ 2.07
LITAF-213ENST00000574701 SHISA4Q96DD7 197 aa27.99■■■□□ 2.07
LITAF-213ENST00000574701 CRISPLD2Q9H0B8 497 aa27.99■■■□□ 2.07
LITAF-213ENST00000574701 ZNF865P0CJ78 1059 aaPredicted RBP27.98■■■□□ 2.07
LITAF-213ENST00000574701 PDE4DQ08499 809 aa27.98■■■□□ 2.07
LITAF-213ENST00000574701 ARHGEF16Q5VV41 709 aa27.98■■■□□ 2.07
LITAF-213ENST00000574701 PPP1R18Q6NYC8 613 aa27.98■■■□□ 2.07
LITAF-213ENST00000574701 MORC4Q8TE76 937 aa27.98■■■□□ 2.07
LITAF-213ENST00000574701 NSUN6Q8TEA1 469 aaKnown RBP27.98■■■□□ 2.07
LITAF-213ENST00000574701 RMDN3Q96TC7 470 aa27.98■■■□□ 2.07
LITAF-213ENST00000574701 RNF26Q9BY78 433 aaPredicted RBP27.98■■■□□ 2.07
LITAF-213ENST00000574701 COL20A1Q9P218 1284 aa27.98■■■□□ 2.07
LITAF-213ENST00000574701 IFNAR1P17181 557 aa27.97■■■□□ 2.07
LITAF-213ENST00000574701 HOXA13P31271 388 aaPredicted RBP27.97■■■□□ 2.07
LITAF-213ENST00000574701 NAPAP54920 295 aa27.97■■■□□ 2.07
LITAF-213ENST00000574701 WWC2Q6AWC2 1192 aa27.97■■■□□ 2.07
LITAF-213ENST00000574701 TRIM22Q8IYM9 498 aa27.97■■■□□ 2.07
LITAF-213ENST00000574701 SMARCC2Q8TAQ2 1214 aa27.97■■■□□ 2.07
LITAF-213ENST00000574701 TAAR1Q96RJ0 339 aa27.97■■■□□ 2.07
LITAF-213ENST00000574701 SLC26A6Q9BXS9 759 aa27.97■■■□□ 2.07
LITAF-213ENST00000574701 FAM184BQ9ULE4 1060 aa27.97■■■□□ 2.07
LITAF-213ENST00000574701 TPCN1Q9ULQ1 816 aa27.97■■■□□ 2.07
LITAF-213ENST00000574701 PRPF3O43395 683 aaKnown RBP27.96■■■□□ 2.07
LITAF-213ENST00000574701 RARBP10826 455 aa27.96■■■□□ 2.07
LITAF-213ENST00000574701 NTRK3Q16288 839 aa27.96■■■□□ 2.07
LITAF-213ENST00000574701 PHKBQ93100 1093 aa27.96■■■□□ 2.07
LITAF-213ENST00000574701 VTA1Q9NP79 307 aa27.96■■■□□ 2.07
LITAF-213ENST00000574701 OGDHLQ9ULD0 1010 aa27.96■■■□□ 2.07
LITAF-213ENST00000574701 CDKL5O76039 1030 aa27.95■■■□□ 2.06
LITAF-213ENST00000574701 SCG2P13521 617 aa27.95■■■□□ 2.06
LITAF-213ENST00000574701 RABEP1Q15276 862 aa27.95■■■□□ 2.06
LITAF-213ENST00000574701 PFKFB3Q16875 520 aaPredicted RBP27.95■■■□□ 2.06
LITAF-213ENST00000574701 ANO1Q5XXA6 986 aa27.95■■■□□ 2.06
LITAF-213ENST00000574701 EEPD1Q7L9B9 569 aa27.95■■■□□ 2.06
LITAF-213ENST00000574701 FBXO16Q8IX29 292 aaPredicted RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms