RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TMOD1P28289 359 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 MTIF2P46199 727 aaKnown RBP15.98■□□□□ 0.15
SMG6-215ENST00000574501 PAK2Q13177 524 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 TEX11Q8IYF3 940 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 OR2W6PQ8NHA6 318 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 CASKIN2Q8WXE0 1202 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 KCNG1Q9UIX4 513 aa15.98■□□□□ 0.15
SMG6-215ENST00000574501 AKR1B10O60218 316 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 PPP1R12BO60237 982 aaPredicted RBP15.97■□□□□ 0.15
SMG6-215ENST00000574501 EZRP15311 586 aaKnown RBP15.97■□□□□ 0.15
SMG6-215ENST00000574501 MRPL12P52815 198 aaKnown RBP15.97■□□□□ 0.15
SMG6-215ENST00000574501 NPY5RQ15761 445 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 EMC10Q5UCC4 262 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 TTI2Q6NXR4 508 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 RASSF8Q8NHQ8 419 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 CNOT6LQ96LI5 555 aaKnown RBP15.97■□□□□ 0.15
SMG6-215ENST00000574501 KRT12Q99456 494 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 DUSP9Q99956 384 aaKnown RBP15.97■□□□□ 0.15
SMG6-215ENST00000574501 NOC4LQ9BVI4 516 aaKnown RBP15.97■□□□□ 0.15
SMG6-215ENST00000574501 MYH6P13533 1939 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 PP2D1A8MPX8 630 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 HMGB1P1B2RPK0 211 aaPredicted RBP15.97■□□□□ 0.15
SMG6-215ENST00000574501 PSMA7O14818 248 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 EPHB6O15197 1021 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 SKAP2O75563 359 aaPredicted RBP15.97■□□□□ 0.15
SMG6-215ENST00000574501 ANKRD20A8PQ5CZ79 823 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 DHX37Q8IY37 1157 aaKnown RBP15.97■□□□□ 0.15
SMG6-215ENST00000574501 TNFRSF25Q93038 417 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 MTMR8Q96EF0 704 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 SGSM3Q96HU1 749 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 DCAF5Q96JK2 942 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 CNNM1Q9NRU3 951 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 BCCIPQ9P287 314 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMG6-215ENST00000574501 RIPOR2Q9Y4F9 1068 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 SOS2Q07890 1332 aaPredicted RBP15.97■□□□□ 0.15
SMG6-215ENST00000574501 RIC1Q4ADV7 1423 aa15.97■□□□□ 0.15
SMG6-215ENST00000574501 GMNCA6NCL1 334 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 RASSF7Q02833 373 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 DRP2Q13474 957 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 CFAP221Q4G0U5 840 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 KLHDC7AQ5VTJ3 777 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 NAIF1Q69YI7 327 aaPredicted RBP15.96■□□□□ 0.15
SMG6-215ENST00000574501 TMC4Q7Z404 712 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 CD302Q8IX05 232 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 TMTC2Q8N394 836 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 RETREG2Q8NC44 543 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 ACTR5Q9H9F9 607 aaPredicted RBP15.96■□□□□ 0.15
SMG6-215ENST00000574501 FAM207AQ9NSI2 230 aaPredicted RBP15.96■□□□□ 0.15
SMG6-215ENST00000574501 GGA2Q9UJY4 613 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 TNKSO95271 1327 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 TMCO5BA8MYB1 307 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 GLE1Q53GS7 698 aaKnown RBP15.96■□□□□ 0.15
SMG6-215ENST00000574501 MIIPQ5JXC2 388 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 LCORLQ8N3X6 602 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 TBC1D31Q96DN5 1066 aa15.96■□□□□ 0.15
SMG6-215ENST00000574501 BAZ2BQ9UIF8 2168 aaKnown RBP15.96■□□□□ 0.14
SMG6-215ENST00000574501 PHRF1Q9P1Y6 1649 aaKnown RBP15.95■□□□□ 0.14
SMG6-215ENST00000574501 MINDY4BA8MYZ0 360 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 PPP1R12AO14974 1030 aaPredicted RBP15.95■□□□□ 0.14
SMG6-215ENST00000574501 PCCAP05165 728 aaPredicted RBP15.95■□□□□ 0.14
SMG6-215ENST00000574501 MAGEA1P43355 309 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 SCTRP47872 440 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 FUT2Q10981 343 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 CRYMQ14894 314 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 NAA25Q14CX7 972 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 ANKRD40Q6AI12 368 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 PPP4R3AQ6IN85 833 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 ORAI2Q96SN7 254 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 FBXO3Q9UK99 471 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 LEMD3Q9Y2U8 911 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 GOLGA6L10A6NI86 522 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 KLRC4O43908 158 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 CDK17Q00537 523 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 GFPT1Q06210 699 aaPredicted RBP15.95■□□□□ 0.14
SMG6-215ENST00000574501 NAALADL2Q58DX5 795 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 MIGA1Q8NAN2 632 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 HELBQ8NG08 1087 aaPredicted RBP15.95■□□□□ 0.14
SMG6-215ENST00000574501 SEC16BQ96JE7 1060 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 TMBIM4Q9HC24 238 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 PLAGL2Q9UPG8 496 aa15.95■□□□□ 0.14
SMG6-215ENST00000574501 CHD4Q14839 1912 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 ANKRD18BA2A2Z9 1011 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 PRPF3O43395 683 aaKnown RBP15.94■□□□□ 0.14
SMG6-215ENST00000574501 ERCC3P19447 782 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 ITGA6P23229 1130 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 GBP2P32456 591 aaPredicted RBP15.94■□□□□ 0.14
SMG6-215ENST00000574501 SF3A3Q12874 501 aaKnown RBP eCLIP15.94■□□□□ 0.14
SMG6-215ENST00000574501 ACCSLQ4AC99 568 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 MREGQ8N565 214 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 PYM1Q9BRP8 204 aaKnown RBP15.94■□□□□ 0.14
SMG6-215ENST00000574501 GREM2Q9H772 168 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 DISC1Q9NRI5 854 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 PACSIN2Q9UNF0 486 aaPredicted RBP15.94■□□□□ 0.14
SMG6-215ENST00000574501 MEGF6O75095 1541 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 DISP2A7MBM2 1401 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 RGPD5Q99666 1765 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 VEGFAP15692 232 aaPredicted RBP15.94■□□□□ 0.14
SMG6-215ENST00000574501 ODF2Q5BJF6 829 aa15.94■□□□□ 0.14
SMG6-215ENST00000574501 TRIM6Q9C030 488 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms