RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 QRICH1Q2TAL8 776 aa30.4■■■□□ 2.46
NPLOC4-215ENST00000574095 IQSEC1Q6DN90 963 aa30.4■■■□□ 2.46
NPLOC4-215ENST00000574095 KIAA1211Q6ZU35 1233 aa30.4■■■□□ 2.46
NPLOC4-215ENST00000574095 TRIM43Q96BQ3 446 aaPredicted RBP30.4■■■□□ 2.46
NPLOC4-215ENST00000574095 GLT1D1Q96MS3 346 aa30.4■■■□□ 2.46
NPLOC4-215ENST00000574095 SENP2Q9HC62 589 aa30.4■■■□□ 2.46
NPLOC4-215ENST00000574095 TBC1D5Q92609 795 aa30.39■■■□□ 2.46
NPLOC4-215ENST00000574095 VTI1AQ96AJ9 217 aa30.39■■■□□ 2.46
NPLOC4-215ENST00000574095 LAMA3Q16787 3333 aa30.39■■■□□ 2.45
NPLOC4-215ENST00000574095 DYNC1LI2O43237 492 aaPredicted RBP30.38■■■□□ 2.45
NPLOC4-215ENST00000574095 CLTBP09497 229 aa30.38■■■□□ 2.45
NPLOC4-215ENST00000574095 NKX3-2P78367 333 aa30.38■■■□□ 2.45
NPLOC4-215ENST00000574095 TLK2Q86UE8 772 aa30.38■■■□□ 2.45
NPLOC4-215ENST00000574095 BADQ92934 168 aa30.38■■■□□ 2.45
NPLOC4-215ENST00000574095 AP5M1Q9H0R1 490 aa30.38■■■□□ 2.45
NPLOC4-215ENST00000574095 MAD2L2Q9UI95 211 aa30.38■■■□□ 2.45
NPLOC4-215ENST00000574095 ABCB11O95342 1321 aa30.38■■■□□ 2.45
NPLOC4-215ENST00000574095 LOC102724159A0A0B4J2E5 919 aa30.37■■■□□ 2.45
NPLOC4-215ENST00000574095 ERICH2A1L162 156 aa30.37■■■□□ 2.45
NPLOC4-215ENST00000574095 KLRF2D3W0D1 207 aa30.37■■■□□ 2.45
NPLOC4-215ENST00000574095 PWP2Q15269 919 aaKnown RBP30.37■■■□□ 2.45
NPLOC4-215ENST00000574095 FBXO11Q86XK2 927 aa30.37■■■□□ 2.45
NPLOC4-215ENST00000574095 RGS22Q8NE09 1264 aa30.37■■■□□ 2.45
NPLOC4-215ENST00000574095 ESYT1Q9BSJ8 1104 aa30.37■■■□□ 2.45
NPLOC4-215ENST00000574095 LSG1Q9H089 658 aaKnown RBP30.37■■■□□ 2.45
NPLOC4-215ENST00000574095 ELP1O95163 1332 aa30.37■■■□□ 2.45
NPLOC4-215ENST00000574095 WTAPQ15007 396 aa30.36■■■□□ 2.45
NPLOC4-215ENST00000574095 PALM3A6NDB9 673 aaPredicted RBP30.35■■■□□ 2.45
NPLOC4-215ENST00000574095 ANTXR2P58335 489 aa30.35■■■□□ 2.45
NPLOC4-215ENST00000574095 PDE4DQ08499 809 aa30.35■■■□□ 2.45
NPLOC4-215ENST00000574095 FSCN1Q16658 493 aaKnown RBP30.35■■■□□ 2.45
NPLOC4-215ENST00000574095 LRIT3Q3SXY7 679 aa30.35■■■□□ 2.45
NPLOC4-215ENST00000574095 ANKRD33Q7Z3H0 272 aa30.35■■■□□ 2.45
NPLOC4-215ENST00000574095 DNERQ8NFT8 737 aa30.35■■■□□ 2.45
NPLOC4-215ENST00000574095 ITGB8P26012 769 aa30.34■■■□□ 2.45
NPLOC4-215ENST00000574095 FAAP100Q0VG06 881 aa30.34■■■□□ 2.45
NPLOC4-215ENST00000574095 SART3Q15020 963 aaKnown RBP30.34■■■□□ 2.45
NPLOC4-215ENST00000574095 TMEM67Q5HYA8 995 aa30.34■■■□□ 2.45
NPLOC4-215ENST00000574095 MB21D2Q8IYB1 491 aaPredicted RBP30.34■■■□□ 2.45
NPLOC4-215ENST00000574095 TOX2Q96NM4 488 aa30.34■■■□□ 2.45
NPLOC4-215ENST00000574095 MPHOSPH6Q99547 160 aaKnown RBP30.34■■■□□ 2.45
NPLOC4-215ENST00000574095 WDR11Q9BZH6 1224 aa30.34■■■□□ 2.45
NPLOC4-215ENST00000574095 TMEM39AQ9NV64 488 aa30.34■■■□□ 2.45
NPLOC4-215ENST00000574095 MRPL11Q9Y3B7 192 aaKnown RBP30.34■■■□□ 2.45
NPLOC4-215ENST00000574095 Q9Y3F1 56 aa30.34■■■□□ 2.45
NPLOC4-215ENST00000574095 DCDC2CA8MYV0 355 aa30.33■■■□□ 2.45
NPLOC4-215ENST00000574095 CDK7P50613 346 aa30.33■■■□□ 2.45
NPLOC4-215ENST00000574095 GRM4Q14833 912 aa30.33■■■□□ 2.45
NPLOC4-215ENST00000574095 CXCL17Q6UXB2 119 aa30.33■■■□□ 2.45
NPLOC4-215ENST00000574095 TAAR1Q96RJ0 339 aa30.33■■■□□ 2.45
NPLOC4-215ENST00000574095 A0A0U1RQG5 324 aaPredicted RBP30.32■■■□□ 2.44
NPLOC4-215ENST00000574095 ARVCFO00192 962 aa30.32■■■□□ 2.44
NPLOC4-215ENST00000574095 KIAA0355O15063 1070 aa30.32■■■□□ 2.44
NPLOC4-215ENST00000574095 EDNRBP24530 442 aa30.32■■■□□ 2.44
NPLOC4-215ENST00000574095 DUSP28Q4G0W2 176 aa30.32■■■□□ 2.44
NPLOC4-215ENST00000574095 BMP2KLQ5H9B9 411 aa30.32■■■□□ 2.44
NPLOC4-215ENST00000574095 MCF2L2Q86YR7 1114 aa30.32■■■□□ 2.44
NPLOC4-215ENST00000574095 SYTL5Q8TDW5 730 aaPredicted RBP30.32■■■□□ 2.44
NPLOC4-215ENST00000574095 IGDCC4Q8TDY8 1250 aa30.32■■■□□ 2.44
NPLOC4-215ENST00000574095 AMNQ9BXJ7 453 aa30.32■■■□□ 2.44
NPLOC4-215ENST00000574095 COL20A1Q9P218 1284 aa30.32■■■□□ 2.44
NPLOC4-215ENST00000574095 RBM47A0AV96 593 aaKnown RBP30.31■■■□□ 2.44
NPLOC4-215ENST00000574095 RAG1P15918 1043 aa30.31■■■□□ 2.44
NPLOC4-215ENST00000574095 TROAPQ12815 778 aa30.31■■■□□ 2.44
NPLOC4-215ENST00000574095 SLC35G1Q2M3R5 365 aa30.31■■■□□ 2.44
NPLOC4-215ENST00000574095 MTMR8Q96EF0 704 aa30.31■■■□□ 2.44
NPLOC4-215ENST00000574095 B4DLN1 442 aa30.3■■■□□ 2.44
NPLOC4-215ENST00000574095 PPP1R11O60927 126 aaPredicted RBP30.3■■■□□ 2.44
NPLOC4-215ENST00000574095 MRPL12P52815 198 aaKnown RBP30.3■■■□□ 2.44
NPLOC4-215ENST00000574095 MAF1Q9H063 256 aa30.3■■■□□ 2.44
NPLOC4-215ENST00000574095 ANO2Q9NQ90 1003 aa30.3■■■□□ 2.44
NPLOC4-215ENST00000574095 BAZ2BQ9UIF8 2168 aaKnown RBP30.3■■■□□ 2.44
NPLOC4-215ENST00000574095 MROH7Q68CQ1 1323 aa30.29■■■□□ 2.44
NPLOC4-215ENST00000574095 SLC27A2O14975 620 aa30.29■■■□□ 2.44
NPLOC4-215ENST00000574095 ZBTB5O15062 677 aa30.29■■■□□ 2.44
NPLOC4-215ENST00000574095 ZEB2O60315 1214 aa30.29■■■□□ 2.44
NPLOC4-215ENST00000574095 CATIPQ7Z7H3 387 aa30.29■■■□□ 2.44
NPLOC4-215ENST00000574095 HOMER1Q86YM7 354 aa30.29■■■□□ 2.44
NPLOC4-215ENST00000574095 GPHNQ9NQX3 736 aaPredicted RBP30.29■■■□□ 2.44
NPLOC4-215ENST00000574095 CFBP00751 764 aa30.28■■■□□ 2.44
NPLOC4-215ENST00000574095 NECTIN1Q15223 517 aa30.28■■■□□ 2.44
NPLOC4-215ENST00000574095 SHHQ15465 462 aa30.28■■■□□ 2.44
NPLOC4-215ENST00000574095 CREB3L3Q68CJ9 461 aa30.28■■■□□ 2.44
NPLOC4-215ENST00000574095 PIGSQ96S52 555 aa30.28■■■□□ 2.44
NPLOC4-215ENST00000574095 RIOX1Q9H6W3 641 aa30.28■■■□□ 2.44
NPLOC4-215ENST00000574095 PRC1O43663 620 aa30.27■■■□□ 2.44
NPLOC4-215ENST00000574095 CABYRO75952 493 aa30.27■■■□□ 2.44
NPLOC4-215ENST00000574095 COL9A3Q14050 684 aaPredicted RBP30.27■■■□□ 2.44
NPLOC4-215ENST00000574095 C9orf50Q5SZB4 431 aa30.27■■■□□ 2.44
NPLOC4-215ENST00000574095 NSUN6Q8TEA1 469 aaKnown RBP30.27■■■□□ 2.44
NPLOC4-215ENST00000574095 RMDN3Q96TC7 470 aa30.27■■■□□ 2.44
NPLOC4-215ENST00000574095 LY9Q9HBG7 655 aa30.27■■■□□ 2.44
NPLOC4-215ENST00000574095 PCDHA1Q9Y5I3 950 aa30.27■■■□□ 2.44
NPLOC4-215ENST00000574095 OPLAHO14841 1288 aa30.26■■■□□ 2.43
NPLOC4-215ENST00000574095 CYTH3O43739 400 aa30.26■■■□□ 2.43
NPLOC4-215ENST00000574095 PPP2R5BQ15173 497 aa30.26■■■□□ 2.43
NPLOC4-215ENST00000574095 CASC1Q6TDU7 716 aa30.26■■■□□ 2.43
NPLOC4-215ENST00000574095 FAM126BQ8IXS8 530 aa30.26■■■□□ 2.43
NPLOC4-215ENST00000574095 OR6J1Q8NGC5 347 aa30.26■■■□□ 2.43
NPLOC4-215ENST00000574095 SCFD2Q8WU76 684 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms