RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 MCM3APO60318 1980 aa14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 PPP1R11O60927 126 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 CDKL5O76039 1030 aa14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 CFBP00751 764 aa14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 CYP2C19P33261 490 aa14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 CNTN2Q02246 1040 aa14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 RABEP1Q15276 862 aa14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 MTFR1Q15390 333 aa14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 MAP3K21Q5TCX8 1036 aa14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 MAMDC4Q6UXC1 1216 aa14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 TRIM22Q8IYM9 498 aa14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 CUL5Q93034 780 aa14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 FAM217BQ9NTX9 383 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 V9GY48 417 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 HTTP42858 3142 aa14.73□□□□□ -0.05
TRAPPC1-206ENST00000573989 GCOM1H8Y6P7 765 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 ST18O60284 1047 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 MSCO60682 206 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 GJB1P08034 283 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 POLR2MP0CAP2 368 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 IFNAR1P17181 557 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 CNGA1P29973 690 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 TRIM32Q13049 653 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 STK3Q13188 491 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 HEATR3Q7Z4Q2 680 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 CCDC12Q8WUD4 166 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 TBC1D32Q96NH3 1257 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 LARP6Q9BRS8 491 aaKnown RBP14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 RNF26Q9BY78 433 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 UNC93B1Q9H1C4 597 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 ABHD16BQ9H3Z7 469 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 LCTP09848 1927 aa14.72□□□□□ -0.05
TRAPPC1-206ENST00000573989 CENPFP49454 3210 aa14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 PRPF3O43395 683 aaKnown RBP14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 PFKFB2O60825 505 aa14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 ALDH5A1P51649 535 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 SSRP1Q08945 709 aaKnown RBP14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 FUT2Q10981 343 aa14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 PPP1R18Q6NYC8 613 aa14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 SLC30A10Q6XR72 485 aa14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 NOL8Q76FK4 1167 aaKnown RBP14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 ARMCX2Q7L311 632 aa14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 TEX2Q8IWB9 1127 aa14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 NSUN6Q8TEA1 469 aaKnown RBP14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 GLT8D2Q9H1C3 349 aa14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 NCOA5Q9HCD5 579 aaKnown RBP14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 PAK6Q9NQU5 681 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 TPCN1Q9ULQ1 816 aa14.71□□□□□ -0.05
TRAPPC1-206ENST00000573989 hCG_1642624A0A1W2PR95 340 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 SOWAHBA6NEL2 793 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 IGHA2P01877 340 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 CYBAP13498 195 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 HSD17B4P51659 736 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 NAPAP54920 295 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 GHRHRQ02643 423 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 ARHGEF16Q5VV41 709 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 SMARCC2Q8TAQ2 1214 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 SYTL5Q8TDW5 730 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 DEFB118Q96PH6 123 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 KIF2CQ99661 725 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 SLC26A6Q9BXS9 759 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 PSTPIP2Q9H939 334 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 LIMCH1Q9UPQ0 1083 aa14.7□□□□□ -0.06
TRAPPC1-206ENST00000573989 SEPT4O43236 478 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 DEXIO95424 95 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 SGPL1O95470 568 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 SCG2P13521 617 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 CCND3P30281 292 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 GJA8P48165 433 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 PDE4DQ08499 809 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 NTRK3Q16288 839 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 PFKFB3Q16875 520 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 CCDC148Q8NFR7 591 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 U2AF1L4Q8WU68 220 aaKnown RBP14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 TBC1D5Q92609 795 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 GPKOWQ92917 476 aaPredicted RBP eCLIP14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 PHKBQ93100 1093 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 ZSCAN31Q96LW9 406 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 FGD4Q96M96 766 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 IWS1Q96ST2 819 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 RMDN3Q96TC7 470 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 BARHL2Q9NY43 387 aa14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 ZHX1Q9UKY1 873 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC1-206ENST00000573989 PIK3CDO00329 1044 aa14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 OPLAHO14841 1288 aa14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 CAPN15O75808 1086 aa14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 SNAI1O95863 264 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 TFRCP02786 760 aaKnown RBP14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 AKR1A1P14550 325 aa14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 HOXA13P31271 388 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 SOX10P56693 466 aa14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 SCRN1Q12765 414 aa14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 ACVR2BQ13705 512 aa14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 PRAMEF19Q5SWL8 479 aa14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 WWC2Q6AWC2 1192 aa14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 MORC4Q8TE76 937 aa14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 VTA1Q9NP79 307 aa14.68□□□□□ -0.06
TRAPPC1-206ENST00000573989 SH2B1Q9NRF2 756 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms