RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 GSPT2Q8IYD1 628 aaKnown RBP17.44■□□□□ 0.38
NUP88-207ENST00000573584 RIN2Q8WYP3 895 aaPredicted RBP17.44■□□□□ 0.38
NUP88-207ENST00000573584 ZNF263O14978 683 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 NKRFO15226 690 aaKnown RBP eCLIP17.43■□□□□ 0.38
NUP88-207ENST00000573584 MYBL2P10244 700 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 AMPD3Q01432 767 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 C2orf54Q08AI8 447 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 ZNF444Q8N0Y2 327 aaPredicted RBP17.43■□□□□ 0.38
NUP88-207ENST00000573584 ANKRD2Q9GZV1 360 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 PLEKP08567 350 aaPredicted RBP17.43■□□□□ 0.38
NUP88-207ENST00000573584 GGCXP38435 758 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 PPP1R2P41236 205 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 TECP42680 631 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 TXNRD3Q86VQ6 643 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 MARCH10Q8NA82 808 aaPredicted RBP17.43■□□□□ 0.38
NUP88-207ENST00000573584 HPS3Q969F9 1004 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 SELENOOQ9BVL4 669 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 JRKLQ9Y4A0 524 aa17.43■□□□□ 0.38
NUP88-207ENST00000573584 ZC3H4Q9UPT8 1303 aaKnown RBP17.42■□□□□ 0.38
NUP88-207ENST00000573584 RREB1Q92766 1687 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
NUP88-207ENST00000573584 USO1O60763 962 aaKnown RBP17.42■□□□□ 0.38
NUP88-207ENST00000573584 NAPAP54920 295 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 SPTY2D1Q68D10 685 aaPredicted RBP17.42■□□□□ 0.38
NUP88-207ENST00000573584 CCDC70Q6NSX1 233 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 CNNM4Q6P4Q7 775 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 SMCR8Q8TEV9 937 aaPredicted RBP17.42■□□□□ 0.38
NUP88-207ENST00000573584 TMEM47Q9BQJ4 181 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 CDCA7Q9BWT1 371 aaPredicted RBP17.42■□□□□ 0.38
NUP88-207ENST00000573584 KLRF2D3W0D1 207 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 NT5C2P49902 561 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 NONOQ15233 471 aaKnown RBP eCLIP17.42■□□□□ 0.38
NUP88-207ENST00000573584 FNBP4Q8N3X1 1017 aaPredicted RBP17.42■□□□□ 0.38
NUP88-207ENST00000573584 TRIM58Q8NG06 486 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 HINFPQ9BQA5 517 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 ZMYND12Q9H0C1 365 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 CPVLQ9H3G5 476 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 RSPH14Q9UHP6 348 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 SNX12Q9UMY4 172 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 PLAGL2Q9UPG8 496 aa17.42■□□□□ 0.38
NUP88-207ENST00000573584 KRT25Q7Z3Z0 450 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 C2CD5Q86YS7 1000 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 CREG2Q8IUH2 290 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 AMOTL1Q8IY63 956 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 SLC44A5Q8NCS7 719 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 SH3RF3Q8TEJ3 882 aaPredicted RBP17.41■□□□□ 0.38
NUP88-207ENST00000573584 IFIH1Q9BYX4 1025 aaKnown RBP17.41■□□□□ 0.38
NUP88-207ENST00000573584 SEMA6BQ9H3T3 888 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 SLC39A2Q9NP94 309 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 TACC1O75410 805 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 KIAA0895Q8NCT3 520 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 SMARCC1Q92922 1105 aaPredicted RBP17.41■□□□□ 0.38
NUP88-207ENST00000573584 LZTS2Q9BRK4 669 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 PCDHA13Q9Y5I0 950 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 COL14A1Q05707 1796 aaKnown RBP17.41■□□□□ 0.38
NUP88-207ENST00000573584 LAMB1P07942 1786 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 SMCO2A6NFE2 343 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 TBC1D9BQ66K14 1250 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 DRC1Q96MC2 740 aa17.41■□□□□ 0.38
NUP88-207ENST00000573584 FAM207AQ9NSI2 230 aaPredicted RBP17.41■□□□□ 0.38
NUP88-207ENST00000573584 KIAA1551Q9HCM1 1747 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 VWA3BQ502W6 1294 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 NEK8Q86SG6 692 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 IQCDQ96DY2 449 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 CALML4Q96GE6 196 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 ARHGAP20Q9P2F6 1191 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 CAPN6Q9Y6Q1 641 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 AGPSO00116 658 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 HNRNPH3P31942 346 aaKnown RBP17.4■□□□□ 0.38
NUP88-207ENST00000573584 MMTAG2Q9BU76 263 aaKnown RBP17.4■□□□□ 0.38
NUP88-207ENST00000573584 DEF6Q9H4E7 631 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 MLXIPQ9HAP2 919 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 C6orf50Q9HD87 102 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 FAM184BQ9ULE4 1060 aa17.4■□□□□ 0.38
NUP88-207ENST00000573584 VGLL3A8MV65 326 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 EPHB6O15197 1021 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 LDHBP07195 334 aaKnown RBP17.39■□□□□ 0.37
NUP88-207ENST00000573584 GNA11P29992 359 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 CENPPQ6IPU0 288 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 NDST4Q9H3R1 872 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 SH2D4AQ9H788 454 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 GOLGA6BA6NDN3 693 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 MOCS3O95396 460 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 KIF11P52732 1056 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 SMIM5Q71RC9 77 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 SV2BQ7L1I2 683 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 MMGT1Q8N4V1 131 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 TGFBRAP1Q8WUH2 860 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 PLEKHA4Q9H4M7 779 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 MMRN2Q9H8L6 949 aa17.39■□□□□ 0.37
NUP88-207ENST00000573584 KCNQ2O43526 872 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 AKR1B10O60218 316 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 EIF4A3P38919 411 aaKnown RBP17.38■□□□□ 0.37
NUP88-207ENST00000573584 COBLL1Q53SF7 1204 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 AENQ8WTP8 325 aaKnown RBP17.38■□□□□ 0.37
NUP88-207ENST00000573584 HDAC7Q8WUI4 952 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 LRRC1Q9BTT6 524 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms