RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 MAF1Q9H063 256 aa16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 PSTPIP2Q9H939 334 aa16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 CYP39A1Q9NYL5 469 aa16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 LCTP09848 1927 aa16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 SMCO2A6NFE2 343 aa16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 STXBP3O00186 592 aa16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 MRPL12P52815 198 aaKnown RBP16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 RPS6P62753 249 aaKnown RBP16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 PKN2Q16513 984 aaKnown RBP16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 SAMD3Q8N6K7 520 aa16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 SMARCC2Q8TAQ2 1214 aa16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 TBC1D5Q92609 795 aa16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 APBA2Q99767 749 aa16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 ALG1Q9BT22 464 aa16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 GLT8D2Q9H1C3 349 aa16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 C6orf50Q9HD87 102 aa16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 MAP3K20Q9NYL2 800 aaKnown RBP16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 VPS54Q9P1Q0 977 aa16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 ADD3Q9UEY8 706 aaKnown RBP16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 PTPN22Q9Y2R2 807 aa16.69■□□□□ 0.26
NPLOC4-209ENST00000572760 ADCY3O60266 1144 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 COBLO75128 1261 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 HSP90AA1P07900 732 aaKnown RBP16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 ADCY7P51828 1080 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 NLRP5P59047 1200 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 IRF5Q13568 498 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 TRIM29Q14134 588 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 SLC30A10Q6XR72 485 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 FCHSD1Q86WN1 690 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 USP6NLQ92738 828 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 SH3GLB2Q9NR46 395 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 SMC3Q9UQE7 1217 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 KIF3AQ9Y496 699 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 PTCH2Q9Y6C5 1203 aa16.68■□□□□ 0.26
NPLOC4-209ENST00000572760 XRCC5P13010 732 aaKnown RBP16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 GNA11P29992 359 aa16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 HOXA13P31271 388 aaPredicted RBP16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 FOSBP53539 338 aa16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 CNTN2Q02246 1040 aa16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 ZNF792Q3KQV3 632 aa16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 TYW1BQ6NUM6 668 aa16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 FBXO46Q6PJ61 603 aaPredicted RBP16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 TRMT44Q8IYL2 757 aaKnown RBP16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 FAM133AQ8N9E0 248 aa16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 NPLOC4Q8TAT6 608 aa16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 SYTL5Q8TDW5 730 aaPredicted RBP16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 AIFM3Q96NN9 605 aa16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 MPHOSPH6Q99547 160 aaKnown RBP16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 BIN2Q9UBW5 565 aaPredicted RBP16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 DIS3Q9Y2L1 958 aaKnown RBP16.67■□□□□ 0.26
NPLOC4-209ENST00000572760 DNAJC25-GNG10A0A024R161 153 aa16.66■□□□□ 0.26
NPLOC4-209ENST00000572760 B4DLN1 442 aa16.66■□□□□ 0.26
NPLOC4-209ENST00000572760 OPLAHO14841 1288 aa16.66■□□□□ 0.26
NPLOC4-209ENST00000572760 HOXC6P09630 235 aa16.66■□□□□ 0.26
NPLOC4-209ENST00000572760 FDPSP14324 419 aaKnown RBP16.66■□□□□ 0.26
NPLOC4-209ENST00000572760 HSD17B4P51659 736 aa16.66■□□□□ 0.26
NPLOC4-209ENST00000572760 BECN1Q14457 450 aa16.66■□□□□ 0.26
NPLOC4-209ENST00000572760 SLAIN1Q8ND83 568 aa16.66■□□□□ 0.26
NPLOC4-209ENST00000572760 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
NPLOC4-209ENST00000572760 MAML3Q96JK9 1138 aa16.66■□□□□ 0.26
NPLOC4-209ENST00000572760 RIC8AQ9NPQ8 531 aa16.66■□□□□ 0.26
NPLOC4-209ENST00000572760 ESYT2A0FGR8 921 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 ASB14A6NK59 587 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 SPDYE3A6NKU9 549 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 ELNP15502 786 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 GRK4P32298 578 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 CUL4AQ13619 759 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 UBE2SQ16763 222 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 ARHGEF16Q5VV41 709 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 MFSD14CQ5VZR4 134 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 USP17L6PQ6QN14 398 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 FAM177A1Q8N128 213 aaPredicted RBP16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 PXYLP1Q8TE99 480 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 C8orf76Q96K31 380 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 PURBQ96QR8 312 aaKnown RBP16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 TAAR1Q96RJ0 339 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 RMDN3Q96TC7 470 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 ZMYND12Q9H0C1 365 aa16.65■□□□□ 0.26
NPLOC4-209ENST00000572760 MYH7BA7E2Y1 1941 aa16.64■□□□□ 0.26
NPLOC4-209ENST00000572760 SOWAHBA6NEL2 793 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 PIK3CDO00329 1044 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 GJB2P29033 226 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 ALDH5A1P51649 535 aaPredicted RBP16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 GHRHRQ02643 423 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 CCL14Q16627 93 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 SLC9C1Q4G0N8 1177 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 ZNF467Q7Z7K2 595 aaPredicted RBP16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 TEX2Q8IWB9 1127 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 DNERQ8NFT8 737 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 NSUN6Q8TEA1 469 aaKnown RBP16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 EHMT1Q9H9B1 1298 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 BRMS1Q9HCU9 246 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 KCNJ14Q9UNX9 436 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 KIAA1217Q5T5P2 1943 aa16.64■□□□□ 0.25
NPLOC4-209ENST00000572760 MEIS2O14770 477 aa16.63■□□□□ 0.25
NPLOC4-209ENST00000572760 EIF2AK2P19525 551 aaKnown RBP16.63■□□□□ 0.25
NPLOC4-209ENST00000572760 JAKMIP3Q5VZ66 844 aa16.63■□□□□ 0.25
NPLOC4-209ENST00000572760 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms