RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 VTI1AQ96AJ9 217 aa21.25■□□□□ 0.99
CHD3-214ENST00000572579 VTA1Q9NP79 307 aa21.25■□□□□ 0.99
CHD3-214ENST00000572579 EYSQ5T1H1 3165 aa21.25■□□□□ 0.99
CHD3-214ENST00000572579 WDR19Q8NEZ3 1342 aa21.25■□□□□ 0.99
CHD3-214ENST00000572579 EDNRBP24530 442 aa21.24■□□□□ 0.99
CHD3-214ENST00000572579 PTH1RQ03431 593 aa21.24■□□□□ 0.99
CHD3-214ENST00000572579 GPATCH4Q5T3I0 446 aaKnown RBP21.24■□□□□ 0.99
CHD3-214ENST00000572579 RNF207Q6ZRF8 634 aa21.24■□□□□ 0.99
CHD3-214ENST00000572579 CYB5R4Q7L1T6 521 aa21.24■□□□□ 0.99
CHD3-214ENST00000572579 ADGRF4Q8IZF3 695 aa21.24■□□□□ 0.99
CHD3-214ENST00000572579 Q9Y3F1 56 aa21.24■□□□□ 0.99
CHD3-214ENST00000572579 CHMLP26374 656 aa21.23■□□□□ 0.99
CHD3-214ENST00000572579 PSMC6P62333 389 aa21.23■□□□□ 0.99
CHD3-214ENST00000572579 FPGSQ05932 587 aa21.23■□□□□ 0.99
CHD3-214ENST00000572579 SEC23AQ15436 765 aa21.23■□□□□ 0.99
CHD3-214ENST00000572579 IMMTQ16891 758 aaKnown RBP21.23■□□□□ 0.99
CHD3-214ENST00000572579 SLC35G1Q2M3R5 365 aa21.23■□□□□ 0.99
CHD3-214ENST00000572579 DUSP28Q4G0W2 176 aa21.23■□□□□ 0.99
CHD3-214ENST00000572579 TTYH1Q9H313 450 aaPredicted RBP21.23■□□□□ 0.99
CHD3-214ENST00000572579 SEMA6BQ9H3T3 888 aa21.23■□□□□ 0.99
CHD3-214ENST00000572579 COL20A1Q9P218 1284 aa21.23■□□□□ 0.99
CHD3-214ENST00000572579 TNKSO95271 1327 aa21.23■□□□□ 0.99
CHD3-214ENST00000572579 ITGA7Q13683 1181 aa21.22■□□□□ 0.99
CHD3-214ENST00000572579 USH1GQ495M9 461 aa21.22■□□□□ 0.99
CHD3-214ENST00000572579 MFSD5Q6N075 450 aa21.22■□□□□ 0.99
CHD3-214ENST00000572579 IQCA1Q86XH1 822 aa21.22■□□□□ 0.99
CHD3-214ENST00000572579 STAG2Q8N3U4 1231 aa21.22■□□□□ 0.99
CHD3-214ENST00000572579 SLC17A8Q8NDX2 589 aa21.22■□□□□ 0.99
CHD3-214ENST00000572579 WDR11Q9BZH6 1224 aa21.22■□□□□ 0.99
CHD3-214ENST00000572579 AP5M1Q9H0R1 490 aa21.22■□□□□ 0.99
CHD3-214ENST00000572579 SENP2Q9HC62 589 aa21.22■□□□□ 0.99
CHD3-214ENST00000572579 CTNNA3Q9UI47 895 aa21.22■□□□□ 0.99
CHD3-214ENST00000572579 CSF2RAP15509 400 aa21.21■□□□□ 0.99
CHD3-214ENST00000572579 SMAD3P84022 425 aaKnown RBP21.21■□□□□ 0.99
CHD3-214ENST00000572579 CDC37Q16543 378 aaPredicted RBP21.21■□□□□ 0.99
CHD3-214ENST00000572579 RGS22Q8NE09 1264 aa21.21■□□□□ 0.99
CHD3-214ENST00000572579 COPS5Q92905 334 aa21.21■□□□□ 0.99
CHD3-214ENST00000572579 VWCEQ96DN2 955 aa21.21■□□□□ 0.99
CHD3-214ENST00000572579 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.21■□□□□ 0.999e-7■■■■■ 27.7
CHD3-214ENST00000572579 TRPV6Q9H1D0 765 aa21.21■□□□□ 0.99
CHD3-214ENST00000572579 KAT14Q9H8E8 782 aa21.21■□□□□ 0.99
CHD3-214ENST00000572579 JMJD4Q9H9V9 463 aa21.21■□□□□ 0.99
CHD3-214ENST00000572579 ADD3Q9UEY8 706 aaKnown RBP21.21■□□□□ 0.99
CHD3-214ENST00000572579 UMODL1Q5DID0 1318 aa21.21■□□□□ 0.99
CHD3-214ENST00000572579 UNC80Q8N2C7 3258 aa21.21■□□□□ 0.99
CHD3-214ENST00000572579 LRRC37A2A6NM11 1700 aa21.21■□□□□ 0.99
CHD3-214ENST00000572579 CYP2C18P33260 490 aa21.2■□□□□ 0.98
CHD3-214ENST00000572579 NT5C2P49902 561 aa21.2■□□□□ 0.98
CHD3-214ENST00000572579 QRICH1Q2TAL8 776 aa21.2■□□□□ 0.98
CHD3-214ENST00000572579 CCDC178Q5BJE1 867 aa21.2■□□□□ 0.98
CHD3-214ENST00000572579 RNPC3Q96LT9 517 aaKnown RBP21.2■□□□□ 0.98
CHD3-214ENST00000572579 PPP1R12CQ9BZL4 782 aa21.2■□□□□ 0.98
CHD3-214ENST00000572579 MROH7Q68CQ1 1323 aa21.2■□□□□ 0.98
CHD3-214ENST00000572579 LOC102724159A0A0B4J2E5 919 aa21.19■□□□□ 0.98
CHD3-214ENST00000572579 OPLAHO14841 1288 aa21.19■□□□□ 0.98
CHD3-214ENST00000572579 B4GALT4O60513 344 aa21.19■□□□□ 0.98
CHD3-214ENST00000572579 ARIH2O95376 493 aa21.19■□□□□ 0.98
CHD3-214ENST00000572579 CYP21A2P08686 494 aa21.19■□□□□ 0.98
CHD3-214ENST00000572579 ACRP10323 421 aa21.19■□□□□ 0.98
CHD3-214ENST00000572579 PWP2Q15269 919 aaKnown RBP21.19■□□□□ 0.98
CHD3-214ENST00000572579 TMEM240Q5SV17 173 aa21.19■□□□□ 0.98
CHD3-214ENST00000572579 RASIP1Q5U651 963 aa21.19■□□□□ 0.98
CHD3-214ENST00000572579 SYTL5Q8TDW5 730 aaPredicted RBP21.19■□□□□ 0.98
CHD3-214ENST00000572579 TAAR1Q96RJ0 339 aa21.19■□□□□ 0.98
CHD3-214ENST00000572579 CDX2Q99626 313 aaPredicted RBP21.19■□□□□ 0.98
CHD3-214ENST00000572579 KRT23Q9C075 422 aa21.19■□□□□ 0.98
CHD3-214ENST00000572579 VAT1LQ9HCJ6 419 aa21.19■□□□□ 0.98
CHD3-214ENST00000572579 PRUNE2Q8WUY3 3088 aa21.18■□□□□ 0.98
CHD3-214ENST00000572579 PPP1R11O60927 126 aaPredicted RBP21.18■□□□□ 0.98
CHD3-214ENST00000572579 CABYRO75952 493 aa21.18■□□□□ 0.98
CHD3-214ENST00000572579 ASPRV1Q53RT3 343 aa21.18■□□□□ 0.98
CHD3-214ENST00000572579 STOX1Q6ZVD7 989 aa21.18■□□□□ 0.98
CHD3-214ENST00000572579 DNERQ8NFT8 737 aa21.18■□□□□ 0.98
CHD3-214ENST00000572579 PPP1R13LQ8WUF5 828 aa21.18■□□□□ 0.98
CHD3-214ENST00000572579 PNMA2Q9UL42 364 aa21.18■□□□□ 0.98
CHD3-214ENST00000572579 PARP1P09874 1014 aaKnown RBP21.17■□□□□ 0.98
CHD3-214ENST00000572579 PURAQ00577 322 aaKnown RBP21.17■□□□□ 0.98
CHD3-214ENST00000572579 COL9A3Q14050 684 aaPredicted RBP21.17■□□□□ 0.98
CHD3-214ENST00000572579 ZNF697Q5TEC3 545 aa21.17■□□□□ 0.98
CHD3-214ENST00000572579 MTMR8Q96EF0 704 aa21.17■□□□□ 0.98
CHD3-214ENST00000572579 CNNM2Q9H8M5 875 aa21.17■□□□□ 0.98
CHD3-214ENST00000572579 MAD2L2Q9UI95 211 aa21.17■□□□□ 0.98
CHD3-214ENST00000572579 GRXCR1A8MXD5 290 aa21.16■□□□□ 0.98
CHD3-214ENST00000572579 SGSM2O43147 1006 aa21.16■□□□□ 0.98
CHD3-214ENST00000572579 PDE4DQ08499 809 aa21.16■□□□□ 0.98
CHD3-214ENST00000572579 IFIT1BQ5T764 474 aaKnown RBP21.16■□□□□ 0.98
CHD3-214ENST00000572579 CCDC62Q6P9F0 684 aa21.16■□□□□ 0.98
CHD3-214ENST00000572579 ZNF365Q70YC5 407 aa21.16■□□□□ 0.98
CHD3-214ENST00000572579 ALDH8A1Q9H2A2 487 aaPredicted RBP21.16■□□□□ 0.98
CHD3-214ENST00000572579 ABCB11O95342 1321 aa21.15■□□□□ 0.98
CHD3-214ENST00000572579 RAD50Q92878 1312 aa21.15■□□□□ 0.98
CHD3-214ENST00000572579 PALM3A6NDB9 673 aaPredicted RBP21.15■□□□□ 0.98
CHD3-214ENST00000572579 ZEB2O60315 1214 aa21.15■□□□□ 0.98
CHD3-214ENST00000572579 OR6J1Q8NGC5 347 aa21.15■□□□□ 0.98
CHD3-214ENST00000572579 UBAC1Q9BSL1 405 aa21.15■□□□□ 0.98
CHD3-214ENST00000572579 NOC4LQ9BVI4 516 aaKnown RBP21.15■□□□□ 0.98
CHD3-214ENST00000572579 WNT8AQ9H1J5 351 aa21.15■□□□□ 0.98
CHD3-214ENST00000572579 TRMT13Q9NUP7 481 aaKnown RBP21.15■□□□□ 0.98
CHD3-214ENST00000572579 LAMA4Q16363 1823 aa21.15■□□□□ 0.98
CHD3-214ENST00000572579 KLRF2D3W0D1 207 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms