RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 DHX40Q8IX18 779 aaKnown RBP6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 TRIML1Q8N9V2 468 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 IQUBQ8NA54 791 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 SPATA20Q8TB22 786 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 LPAR1Q92633 364 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 SMARCE1Q969G3 411 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 TRIM44Q96DX7 344 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 PAGE5Q96GU1 130 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 MBOAT7Q96N66 472 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 MTMR9Q96QG7 549 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 FEZ1Q99689 392 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 WDR18Q9BV38 432 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 ANO3Q9BYT9 981 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 RNF181Q9P0P0 153 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 CCDC39Q9UFE4 941 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 MAN1B1Q9UKM7 699 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 PLXNA1Q9UIW2 1896 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 ABCB11O95342 1321 aa6.95□□□□□ -1.3
TRAPPC1-204ENST00000571947 CYP3A7-CYP3A51PA0A087WV96 503 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 SMTNL1A8MU46 457 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 BECN2A8MW95 431 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP17L15C9J2P7 530 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP17L13C9JLJ4 530 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP17L11C9JVI0 530 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP17L18D6R9N7 530 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP17L22D6RA61 530 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP17L17D6RBQ6 530 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP17L19D6RCP7 530 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP17L20D6RJB6 530 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 PIK3CDO00329 1044 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 OPLAHO14841 1288 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 IKBKBO14920 756 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 GTPBP6O43824 516 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 SLC37A4O43826 429 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 DDNO94850 711 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 TDP2O95551 362 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 YBX3P16989 372 aaKnown RBP eCLIP6.94□□□□□ -1.33e-7■■■□□ 14.8
TRAPPC1-204ENST00000571947 CYP3A7P24462 503 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 LMOD1P29536 600 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 INPP5BP32019 993 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 UBA7P41226 1012 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 STAT6P42226 847 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 AFMP43652 599 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 FXR2P51116 673 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP17L24Q0WX57 530 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 DPYDQ12882 1025 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 MORC3Q14149 939 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZYXQ15942 572 aaKnown RBP6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 CALCRLQ16602 461 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 USH1GQ495M9 461 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 RRAGBQ5VZM2 374 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP17L6PQ6QN14 398 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 SARM1Q6SZW1 724 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 CABP7Q86V35 215 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 GRAMD1CQ8IYS0 662 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 SCYL3Q8IZE3 742 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 AOPEPQ8N6M6 819 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 IGSF22Q8N9C0 903 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 CRYGNQ8WXF5 182 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 KIFC2Q96AC6 838 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 AS3MTQ9HBK9 375 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 ADARB2Q9NS39 739 aaKnown RBP6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 GGA3Q9NZ52 723 aa6.94□□□□□ -1.3
TRAPPC1-204ENST00000571947 MCM3APO60318 1980 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 PP2D1A8MPX8 630 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 SLC26A4O43511 780 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 CYP3A4P08684 503 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 BMP6P22004 513 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 CDC25AP30304 524 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 SREBF1P36956 1147 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 TECP42680 631 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 TXKP42681 527 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZNF75DP51815 510 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP14P54578 494 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 PLCB2Q00722 1185 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 PDIA5Q14554 519 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 NCAPHQ15003 741 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 KARSQ15046 597 aaKnown RBP6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 TMEM266Q2M3C6 531 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 SUPT20HL1Q3ZLR7 823 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 CT47A1Q5JQC4 288 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 NOL9Q5SY16 702 aaKnown RBP6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 ISM2Q6H9L7 571 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 CCDC174Q6PII3 467 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 PLA2G4DQ86XP0 818 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 PRPF38AQ8NAV1 312 aaKnown RBP6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 MLKLQ8NB16 471 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 GSDMAQ96QA5 445 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 P2RX7Q99572 595 aaKnown RBP6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 SLF1Q9BQI6 1058 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 RAB34Q9BZG1 259 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 CUEDC2Q9H467 287 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 MAGEF1Q9HAY2 307 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 DISC1Q9NRI5 854 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 FBXO28Q9NVF7 368 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 DDX25Q9UHL0 483 aaKnown RBP6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 DACH1Q9UI36 760 aa6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 MRPL11Q9Y3B7 192 aaKnown RBP6.93□□□□□ -1.3
TRAPPC1-204ENST00000571947 LRRC37A2A6NM11 1700 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms