RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ZC3H6P61129 1189 aaKnown RBP18.66■□□□□ 0.58
LITAF-209ENST00000571688 TRIM28Q13263 835 aaKnown RBP18.66■□□□□ 0.58
LITAF-209ENST00000571688 CCDC121Q6ZUS5 278 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 FAM228AQ86W67 206 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 ZSCAN29Q8IWY8 852 aaPredicted RBP18.66■□□□□ 0.58
LITAF-209ENST00000571688 CSGALNACT2Q8N6G5 542 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 C3orf20Q8ND61 904 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 IQCDQ96DY2 449 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 PCMTD1Q96MG8 357 aaPredicted RBP18.66■□□□□ 0.58
LITAF-209ENST00000571688 ORAI2Q96SN7 254 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 NACAP1Q9BZK3 213 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 CENPHQ9H3R5 247 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 EPB41L5Q9HCM4 733 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 DISC1Q9NRI5 854 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 DDX20Q9UHI6 824 aaKnown RBP18.66■□□□□ 0.58
LITAF-209ENST00000571688 GOLGA6L7A0A1B0GV03 622 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 PJA2O43164 708 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 SEMA3FQ13275 785 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 NAALADL2Q58DX5 795 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 ARL6IP4Q66PJ3 421 aaKnown RBP18.65■□□□□ 0.58
LITAF-209ENST00000571688 TYW1BQ6NUM6 668 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 CYB5D1Q6P9G0 228 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 FUKQ8N0W3 1084 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 CNOT6LQ96LI5 555 aaKnown RBP18.65■□□□□ 0.58
LITAF-209ENST00000571688 ARAP2Q8WZ64 1704 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 KCPQ6ZWJ8 1503 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 ZSCAN5CA6NGD5 496 aaPredicted RBP18.65■□□□□ 0.58
LITAF-209ENST00000571688 GNAT2P19087 354 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 MCM7P33993 719 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 SATB1Q01826 763 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 MAP3K12Q12852 859 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 CFAP221Q4G0U5 840 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 CCDC50Q8IVM0 306 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 LCORLQ8N3X6 602 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 DHTKD1Q96HY7 919 aaPredicted RBP18.65■□□□□ 0.58
LITAF-209ENST00000571688 CCDC114Q96M63 670 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 RNF14Q9UBS8 474 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 SALL4Q9UJQ4 1053 aa18.65■□□□□ 0.58
LITAF-209ENST00000571688 PDE8BO95263 885 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 ITGA6P23229 1130 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 ATP2B2Q01814 1243 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 GUCY2DQ02846 1103 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 WHAMMQ8TF30 809 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 CNNM1Q9NRU3 951 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 SLC4A4Q9Y6R1 1079 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 PNPLA7Q6ZV29 1317 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 ESYT3A0FGR9 886 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 MYL1P05976 194 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 PDHBP11177 359 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 KLHDC7AQ5VTJ3 777 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 PIK3AP1Q6ZUJ8 805 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 ZBTB38Q8NAP3 1195 aaPredicted RBP18.64■□□□□ 0.57
LITAF-209ENST00000571688 IFT81Q8WYA0 676 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 MS4A14Q96JA4 679 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 OSBPL7Q9BZF2 842 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 TMBIM4Q9HC24 238 aa18.64■□□□□ 0.57
LITAF-209ENST00000571688 EIF4A3P38919 411 aaKnown RBP18.63■□□□□ 0.57
LITAF-209ENST00000571688 C2CD5Q86YS7 1000 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 FAM114A1Q8IWE2 563 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 ARFGAP2Q8N6H7 521 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 C4orf32Q8N8J7 132 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 CASKIN2Q8WXE0 1202 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 SGSM3Q96HU1 749 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 NOC4LQ9BVI4 516 aaKnown RBP18.63■□□□□ 0.57
LITAF-209ENST00000571688 GREM2Q9H772 168 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 RBM28Q9NW13 759 aaKnown RBP18.63■□□□□ 0.57
LITAF-209ENST00000571688 TSKSQ9UJT2 592 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 MTIF2P46199 727 aaKnown RBP18.63■□□□□ 0.57
LITAF-209ENST00000571688 GUCY2FP51841 1108 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 SPRED3Q2MJR0 410 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 SPATA5Q8NB90 893 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 FAXDC2Q96IV6 333 aa18.63■□□□□ 0.57
LITAF-209ENST00000571688 DNM1LO00429 736 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 CCNE1P24864 410 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 HSPA9P38646 679 aaKnown RBP18.62■□□□□ 0.57
LITAF-209ENST00000571688 ANKRD20A8PQ5CZ79 823 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 ENAHQ8N8S7 591 aaPredicted RBP18.62■□□□□ 0.57
LITAF-209ENST00000571688 P2RX5Q93086 422 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 PPANQ9NQ55 473 aaKnown RBP18.62■□□□□ 0.57
LITAF-209ENST00000571688 TPX2Q9ULW0 747 aaKnown RBP18.62■□□□□ 0.57
LITAF-209ENST00000571688 PLAAQ9Y263 795 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 COL18A1P39060 1754 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 CRYMQ14894 314 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 TEX11Q8IYF3 940 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 MTMR8Q96EF0 704 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 MYH3P11055 1940 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 DLEC1Q9Y238 1755 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 CNTNAP5Q8WYK1 1306 aa18.62■□□□□ 0.57
LITAF-209ENST00000571688 TNS3Q68CZ2 1445 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 PAPPAQ13219 1627 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 BICDL2A1A5D9 508 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 GMNCA6NCL1 334 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 MAGEA1P43355 309 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 LRIG3Q6UXM1 1119 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
LITAF-209ENST00000571688 ESR2Q92731 530 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 EEF2KMTQ96G04 330 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 PLCB1Q9NQ66 1216 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 KBTBD4Q9NVX7 518 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms