RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 TMEM63BQ5T3F8 832 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 EEPD1Q7L9B9 569 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 ANKRD33Q7Z3H0 272 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 TLK2Q86UE8 772 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 PCSK9Q8NBP7 692 aaKnown RBP17.63■□□□□ 0.41
RAB40B-203ENST00000570676 NUP133Q8WUM0 1156 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 UBAC1Q9BSL1 405 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 SPC25Q9HBM1 224 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 VTA1Q9NP79 307 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 ADD3Q9UEY8 706 aaKnown RBP17.63■□□□□ 0.41
RAB40B-203ENST00000570676 RBM8AQ9Y5S9 174 aaKnown RBP17.63■□□□□ 0.41
RAB40B-203ENST00000570676 ELP1O95163 1332 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 KIAA0355O15063 1070 aa17.62■□□□□ 0.41
RAB40B-203ENST00000570676 BEX3Q00994 111 aa17.62■□□□□ 0.41
RAB40B-203ENST00000570676 USH1GQ495M9 461 aa17.62■□□□□ 0.41
RAB40B-203ENST00000570676 RNF207Q6ZRF8 634 aa17.62■□□□□ 0.41
RAB40B-203ENST00000570676 STOX1Q6ZVD7 989 aa17.62■□□□□ 0.41
RAB40B-203ENST00000570676 ADGRF4Q8IZF3 695 aa17.62■□□□□ 0.41
RAB40B-203ENST00000570676 BADQ92934 168 aa17.62■□□□□ 0.41
RAB40B-203ENST00000570676 GLT1D1Q96MS3 346 aa17.62■□□□□ 0.41
RAB40B-203ENST00000570676 TOX2Q96NM4 488 aa17.62■□□□□ 0.41
RAB40B-203ENST00000570676 DNAH12Q6ZR08 3092 aa17.61■□□□□ 0.41
RAB40B-203ENST00000570676 PARP1P09874 1014 aaKnown RBP17.61■□□□□ 0.41
RAB40B-203ENST00000570676 EDNRBP24530 442 aa17.61■□□□□ 0.41
RAB40B-203ENST00000570676 CALML3P27482 149 aa17.61■□□□□ 0.41
RAB40B-203ENST00000570676 FAAP100Q0VG06 881 aa17.61■□□□□ 0.41
RAB40B-203ENST00000570676 GNASQ5JWF2 1037 aa17.61■□□□□ 0.41
RAB40B-203ENST00000570676 IFIT1BQ5T764 474 aaKnown RBP17.61■□□□□ 0.41
RAB40B-203ENST00000570676 GPR153Q6NV75 609 aa17.61■□□□□ 0.41
RAB40B-203ENST00000570676 A0A0U1RQG5 324 aaPredicted RBP17.6■□□□□ 0.41
RAB40B-203ENST00000570676 CDK7P50613 346 aa17.6■□□□□ 0.41
RAB40B-203ENST00000570676 QRICH1Q2TAL8 776 aa17.6■□□□□ 0.41
RAB40B-203ENST00000570676 C9orf50Q5SZB4 431 aa17.6■□□□□ 0.41
RAB40B-203ENST00000570676 IQSEC1Q6DN90 963 aa17.6■□□□□ 0.41
RAB40B-203ENST00000570676 STAG2Q8N3U4 1231 aa17.6■□□□□ 0.41
RAB40B-203ENST00000570676 JMJD4Q9H9V9 463 aa17.6■□□□□ 0.41
RAB40B-203ENST00000570676 TBX21Q9UL17 535 aa17.6■□□□□ 0.41
RAB40B-203ENST00000570676 ABCB11O95342 1321 aa17.6■□□□□ 0.41
RAB40B-203ENST00000570676 SCN10AQ9Y5Y9 1956 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 MROH7Q68CQ1 1323 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 RBM47A0AV96 593 aaKnown RBP17.59■□□□□ 0.41
RAB40B-203ENST00000570676 E7EWF7 191 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 NECTIN1Q15223 517 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 FSCN1Q16658 493 aaKnown RBP17.59■□□□□ 0.41
RAB40B-203ENST00000570676 SLC35G1Q2M3R5 365 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 DUSP28Q4G0W2 176 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 NOL8Q76FK4 1167 aaKnown RBP17.59■□□□□ 0.41
RAB40B-203ENST00000570676 RGS22Q8NE09 1264 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 DNERQ8NFT8 737 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 C22orf23Q9BZE7 217 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 SENP2Q9HC62 589 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 MAD2L2Q9UI95 211 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 Q9Y3F1 56 aa17.59■□□□□ 0.41
RAB40B-203ENST00000570676 DCDC2CA8MYV0 355 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 ARVCFO00192 962 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 HSPA4P34932 840 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 ANTXR2P58335 489 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 TRDNQ13061 729 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 SHHQ15465 462 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 CREB3L3Q68CJ9 461 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 CXCL17Q6UXB2 119 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 FAM126BQ8IXS8 530 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 MB21D2Q8IYB1 491 aaPredicted RBP17.58■□□□□ 0.4
RAB40B-203ENST00000570676 TBC1D5Q92609 795 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 MTMR8Q96EF0 704 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 MAF1Q9H063 256 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 COL20A1Q9P218 1284 aa17.58■□□□□ 0.4
RAB40B-203ENST00000570676 PALM3A6NDB9 673 aaPredicted RBP17.57■□□□□ 0.4
RAB40B-203ENST00000570676 OPLAHO14841 1288 aa17.57■□□□□ 0.4
RAB40B-203ENST00000570676 SLC27A2O14975 620 aa17.57■□□□□ 0.4
RAB40B-203ENST00000570676 DYNC1LI2O43237 492 aaPredicted RBP17.57■□□□□ 0.4
RAB40B-203ENST00000570676 RAG1P15918 1043 aa17.57■□□□□ 0.4
RAB40B-203ENST00000570676 EPHB4P54760 987 aa17.57■□□□□ 0.4
RAB40B-203ENST00000570676 GRM4Q14833 912 aa17.57■□□□□ 0.4
RAB40B-203ENST00000570676 RNF20Q5VTR2 975 aa17.57■□□□□ 0.4
RAB40B-203ENST00000570676 Q7L0L9 218 aa17.57■□□□□ 0.4
RAB40B-203ENST00000570676 RALYLQ86SE5 291 aaKnown RBP17.57■□□□□ 0.4
RAB40B-203ENST00000570676 SLC43A3Q8NBI5 491 aa17.57■□□□□ 0.4
RAB40B-203ENST00000570676 NCOA7Q8NI08 942 aa17.57■□□□□ 0.4
RAB40B-203ENST00000570676 SYTL5Q8TDW5 730 aaPredicted RBP17.57■□□□□ 0.4
RAB40B-203ENST00000570676 AP5M1Q9H0R1 490 aa17.57■□□□□ 0.4
RAB40B-203ENST00000570676 TMEM39AQ9NV64 488 aa17.57■□□□□ 0.4
RAB40B-203ENST00000570676 BAZ2BQ9UIF8 2168 aaKnown RBP17.56■□□□□ 0.4
RAB40B-203ENST00000570676 GRIN2DO15399 1336 aa17.56■□□□□ 0.4
RAB40B-203ENST00000570676 KLRF2D3W0D1 207 aa17.56■□□□□ 0.4
RAB40B-203ENST00000570676 DHX16O60231 1041 aaKnown RBP17.56■□□□□ 0.4
RAB40B-203ENST00000570676 PPP1R11O60927 126 aaPredicted RBP17.56■□□□□ 0.4
RAB40B-203ENST00000570676 CABYRO75952 493 aa17.56■□□□□ 0.4
RAB40B-203ENST00000570676 PDE4DQ08499 809 aa17.56■□□□□ 0.4
RAB40B-203ENST00000570676 FBXO11Q86XK2 927 aa17.56■□□□□ 0.4
RAB40B-203ENST00000570676 TBC1D32Q96NH3 1257 aa17.56■□□□□ 0.4
RAB40B-203ENST00000570676 WDR11Q9BZH6 1224 aa17.56■□□□□ 0.4
RAB40B-203ENST00000570676 TANC1Q9C0D5 1861 aa17.55■□□□□ 0.4
RAB40B-203ENST00000570676 IFIT3O14879 490 aaKnown RBP17.55■□□□□ 0.4
RAB40B-203ENST00000570676 CD4P01730 458 aa17.55■□□□□ 0.4
RAB40B-203ENST00000570676 RBM25P49756 843 aaKnown RBP17.55■□□□□ 0.4
RAB40B-203ENST00000570676 GHRHRQ02643 423 aa17.55■□□□□ 0.4
RAB40B-203ENST00000570676 TROAPQ12815 778 aa17.55■□□□□ 0.4
RAB40B-203ENST00000570676 CHST3Q7LGC8 479 aa17.55■□□□□ 0.4
RAB40B-203ENST00000570676 VTI1AQ96AJ9 217 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms