RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 AACSQ86V21 672 aa8.69□□□□□ -1.02
SMG6-205ENST00000570659 KANSL2Q9H9L4 492 aa8.69□□□□□ -1.02
SMG6-205ENST00000570659 SWAP70Q9UH65 585 aa8.69□□□□□ -1.02
SMG6-205ENST00000570659 NLRC5Q86WI3 1866 aa8.68□□□□□ -1.02
SMG6-205ENST00000570659 MYH7P12883 1935 aa8.68□□□□□ -1.02
SMG6-205ENST00000570659 ADD2P35612 726 aa8.68□□□□□ -1.02
SMG6-205ENST00000570659 COL19A1Q14993 1142 aa8.68□□□□□ -1.02
SMG6-205ENST00000570659 TCEAL5Q5H9L2 206 aa8.68□□□□□ -1.02
SMG6-205ENST00000570659 GDF6Q6KF10 455 aaPredicted RBP8.68□□□□□ -1.02
SMG6-205ENST00000570659 PHOSPHO2Q8TCD6 241 aa8.68□□□□□ -1.02
SMG6-205ENST00000570659 DNAJC2Q99543 621 aaKnown RBP8.68□□□□□ -1.02
SMG6-205ENST00000570659 FTOQ9C0B1 505 aaKnown RBP eCLIP8.68□□□□□ -1.02
SMG6-205ENST00000570659 PUS7LQ9H0K6 701 aaKnown RBP8.68□□□□□ -1.02
SMG6-205ENST00000570659 SPC25Q9HBM1 224 aa8.68□□□□□ -1.02
SMG6-205ENST00000570659 EPB41L4AQ9HCS5 686 aaPredicted RBP8.68□□□□□ -1.02
SMG6-205ENST00000570659 GOPCQ9HD26 462 aa8.68□□□□□ -1.02
SMG6-205ENST00000570659 RNF146Q9NTX7 359 aa8.68□□□□□ -1.02
SMG6-205ENST00000570659 LINC01565O15544 149 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 CABYRO75952 493 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 GJB5O95377 273 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 LINC00271P0C7V0 271 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 ZNF200P98182 395 aaPredicted RBP8.67□□□□□ -1.02
SMG6-205ENST00000570659 FAM47CQ5HY64 1035 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 KIAA1211Q6ZU35 1233 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 MICAL3Q7RTP6 2002 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 PRPF38AQ8NAV1 312 aaKnown RBP8.67□□□□□ -1.02
SMG6-205ENST00000570659 MORC4Q8TE76 937 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 KAT2BQ92831 832 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 CEP95Q96GE4 821 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 CCDC17Q96LX7 622 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 AP5M1Q9H0R1 490 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 BCL11AQ9H165 835 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 SH2D4AQ9H788 454 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 INCENPQ9NQS7 918 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 CYP39A1Q9NYL5 469 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 CLIP2Q9UDT6 1046 aa8.67□□□□□ -1.02
SMG6-205ENST00000570659 NFIBO00712 420 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 TBX10O75333 385 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 CSPG5O95196 566 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 PDGFBP01127 241 aaPredicted RBP8.66□□□□□ -1.02
SMG6-205ENST00000570659 PFKMP08237 780 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 ALAS1P13196 640 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 ALADP13716 330 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 COPB2P35606 906 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 CSPP1Q1MSJ5 1256 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 TRIM71Q2Q1W2 868 aaKnown RBP8.66□□□□□ -1.02
SMG6-205ENST00000570659 DUSP28Q4G0W2 176 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 SLC30A10Q6XR72 485 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 ASCL5Q7RTU5 278 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 RNF135Q8IUD6 432 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 CHST13Q8NET6 341 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 ARHGAP45Q92619 1136 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 FRAT1Q92837 279 aaPredicted RBP8.66□□□□□ -1.02
SMG6-205ENST00000570659 TGS1Q96RS0 853 aaKnown RBP8.66□□□□□ -1.02
SMG6-205ENST00000570659 ACAD9Q9H845 621 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 NYAP2Q9P242 653 aa8.66□□□□□ -1.02
SMG6-205ENST00000570659 RBM47A0AV96 593 aaKnown RBP8.65□□□□□ -1.02
SMG6-205ENST00000570659 GSG1L2A8MUP6 293 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 TMEM232C9JQI7 657 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 PITPNM1O00562 1244 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 NMT2O60551 498 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 ZBED4O75132 1171 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 CXCL10P02778 98 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 CHMP4BP1P59074 171 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 IQSEC1Q6DN90 963 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 TTBK2Q6IQ55 1244 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 CEP85Q6P2H3 762 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 KCTD1Q719H9 257 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 CERS3Q8IU89 383 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 ADHFE1Q8IWW8 467 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 TRERF1Q96PN7 1200 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 WDR11Q9BZH6 1224 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 LMCD1Q9NZU5 365 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 SLC4A4Q9Y6R1 1079 aa8.65□□□□□ -1.02
SMG6-205ENST00000570659 DMXL1Q9Y485 3027 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 ST18O60284 1047 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 GFRA3O60609 400 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 ACTN1P12814 892 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 RBM10P98175 930 aaKnown RBP8.64□□□□□ -1.03
SMG6-205ENST00000570659 HYAL1Q12794 435 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 CAMK1Q14012 370 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 BAATQ14032 418 aaPredicted RBP8.64□□□□□ -1.03
SMG6-205ENST00000570659 EPC2Q52LR7 807 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 HERC4Q5GLZ8 1057 aaPredicted RBP8.64□□□□□ -1.03
SMG6-205ENST00000570659 SLFN13Q68D06 897 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 NSMFQ6X4W1 530 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 EP400NLQ6ZTU2 488 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 RPAINQ86UA6 219 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 SIRT2Q8IXJ6 389 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 FBXO22Q8NEZ5 403 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 OR6J1Q8NGC5 347 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 SP7Q8TDD2 431 aaPredicted RBP8.64□□□□□ -1.03
SMG6-205ENST00000570659 MRPL38Q96DV4 380 aaKnown RBP8.64□□□□□ -1.03
SMG6-205ENST00000570659 RAD9AQ99638 391 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 MTG1Q9BT17 334 aaPredicted RBP8.64□□□□□ -1.03
SMG6-205ENST00000570659 BOLA2Q9H3K6 86 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 ATP8A2Q9NTI2 1148 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 MTMR4Q9NYA4 1195 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 HDAC5Q9UQL6 1122 aa8.64□□□□□ -1.03
SMG6-205ENST00000570659 COG6Q9Y2V7 657 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms