RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 CTR9Q6PD62 1173 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 SLC39A5Q6ZMH5 540 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 RNF180Q86T96 592 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 RIOX2Q8IUF8 465 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 FAM161BQ96MY7 647 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 SLF1Q9BQI6 1058 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 PUS7LQ9H0K6 701 aaKnown RBP7.76□□□□□ -1.17
SMG6-204ENST00000570606 MKNK2Q9HBH9 465 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 PDLIM7Q9NR12 457 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 TFIP11Q9UBB9 837 aaKnown RBP7.76□□□□□ -1.17
SMG6-204ENST00000570606 ISY1Q9ULR0 285 aaKnown RBP7.76□□□□□ -1.17
SMG6-204ENST00000570606 CNPY2Q9Y2B0 182 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 CTDP1Q9Y5B0 961 aaPredicted RBP7.76□□□□□ -1.17
SMG6-204ENST00000570606 MAFBQ9Y5Q3 323 aaPredicted RBP7.76□□□□□ -1.17
SMG6-204ENST00000570606 UNC80Q8N2C7 3258 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 MINDY4BA8MYZ0 360 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 VWA5AO00534 786 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 PGK1P00558 417 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 IGHA2P01877 340 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 AKR1A1P14550 325 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 SNX17Q15036 470 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 SNRNP48Q6IEG0 339 aaKnown RBP7.75□□□□□ -1.17
SMG6-204ENST00000570606 PTCRAQ6ISU1 281 aaPredicted RBP7.75□□□□□ -1.17
SMG6-204ENST00000570606 SIAH1Q8IUQ4 282 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 LENG1Q96BZ8 264 aaPredicted RBP7.75□□□□□ -1.17
SMG6-204ENST00000570606 NUP88Q99567 741 aaPredicted RBP7.75□□□□□ -1.17
SMG6-204ENST00000570606 TINF2Q9BSI4 451 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 TEX13BQ9BXU2 312 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 SLC6A16Q9GZN6 736 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 ECHDC1Q9NTX5 307 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 NRBP1Q9UHY1 535 aa7.75□□□□□ -1.17
SMG6-204ENST00000570606 ZHX1Q9UKY1 873 aaPredicted RBP7.75□□□□□ -1.17
SMG6-204ENST00000570606 ZNF214Q9UL59 606 aaPredicted RBP7.75□□□□□ -1.17
SMG6-204ENST00000570606 A0A1W2PQ45 241 aaPredicted RBP7.74□□□□□ -1.17
SMG6-204ENST00000570606 A0A1W2PQY0 241 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 GPAA1O43292 621 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 PQBP1O60828 265 aaKnown RBP7.74□□□□□ -1.17
SMG6-204ENST00000570606 NDUFB10O96000 172 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 RASA1P20936 1047 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 TSHZ3Q63HK5 1081 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 KBTBD3Q8NAB2 608 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 APPBP2Q92624 585 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 BADQ92934 168 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 DDX11Q96FC9 970 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 STRBPQ96SI9 672 aaKnown RBP7.74□□□□□ -1.17
SMG6-204ENST00000570606 ZNF287Q9HBT7 754 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 PHF24Q9UPV7 400 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 TTC28Q96AY4 2481 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 CDH23Q9H251 3354 aa7.74□□□□□ -1.17
SMG6-204ENST00000570606 LRRC37A2A6NM11 1700 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 TRIM43BA6NCK2 446 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 GSG1L2A8MUP6 293 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 PIK3CDO00329 1044 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 RNF113AO15541 343 aaKnown RBP7.73□□□□□ -1.17
SMG6-204ENST00000570606 ATP9BO43861 1147 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 ZBED4O75132 1171 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 PRDM1O75626 825 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 APPP05067 770 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 ZFYP08048 801 aaPredicted RBP7.73□□□□□ -1.17
SMG6-204ENST00000570606 CLTBP09497 229 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 TAL1P17542 331 aaPredicted RBP7.73□□□□□ -1.17
SMG6-204ENST00000570606 GNAT2P19087 354 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 TLE2Q04725 743 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 PTK2Q05397 1052 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 SHHQ15465 462 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 LRRFIP1Q32MZ4 808 aaKnown RBP7.73□□□□□ -1.17
SMG6-204ENST00000570606 ZNF792Q3KQV3 632 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 SBK1Q52WX2 424 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 C9orf50Q5SZB4 431 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 C20orf194Q5TEA3 1177 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 C1orf53Q5VUE5 145 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 FAM109BQ6ICB4 259 aaPredicted RBP7.73□□□□□ -1.17
SMG6-204ENST00000570606 GIMAP6Q6P9H5 292 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 SH3RF1Q7Z6J0 888 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 CPXCR1Q8N123 301 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 LRRC47Q8N1G4 583 aaKnown RBP7.73□□□□□ -1.17
SMG6-204ENST00000570606 REPS2Q8NFH8 660 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 OSBP2Q969R2 916 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 KIFC2Q96AC6 838 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 TRIM43Q96BQ3 446 aaPredicted RBP7.73□□□□□ -1.17
SMG6-204ENST00000570606 RNPC3Q96LT9 517 aaKnown RBP7.73□□□□□ -1.17
SMG6-204ENST00000570606 GUCD1Q96NT3 240 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 EPB41L4AQ9HCS5 686 aaPredicted RBP7.73□□□□□ -1.17
SMG6-204ENST00000570606 STARD7Q9NQZ5 370 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 NYAP2Q9P242 653 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 ADAMTS5Q9UNA0 930 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 DIS3Q9Y2L1 958 aaKnown RBP7.73□□□□□ -1.17
SMG6-204ENST00000570606 SYNGAP1Q96PV0 1343 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 SYNRGQ9UMZ2 1314 aa7.73□□□□□ -1.17
SMG6-204ENST00000570606 PLIN4Q96Q06 1357 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 F5H6K3 240 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 M0R2C6 588 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 SLC3A2P08195 630 aaKnown RBP7.72□□□□□ -1.17
SMG6-204ENST00000570606 ZNF865P0CJ78 1059 aaPredicted RBP7.72□□□□□ -1.17
SMG6-204ENST00000570606 RAG1P15918 1043 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 FPGSQ05932 587 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 KLRC3Q07444 240 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 IKQ13123 557 aaPredicted RBP7.72□□□□□ -1.17
SMG6-204ENST00000570606 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMG6-204ENST00000570606 ZNF444Q8N0Y2 327 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms