RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 KIAA1468Q9P260 1216 aa7.58□□□□□ -1.2
CTDNEP1-204ENST00000570484 CCPG1Q9ULG6 757 aa7.58□□□□□ -1.2
CTDNEP1-204ENST00000570484 PRR12Q9ULL5 1215 aa7.58□□□□□ -1.2
CTDNEP1-204ENST00000570484 WDR33Q9C0J8 1336 aaKnown RBP7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 LOC285556D6RIA3 1793 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 RASSF10A6NK89 507 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 PDHXO00330 501 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 CYTH3O43739 400 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 STX6O43752 255 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 CALML3P27482 149 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 ADCY7P51828 1080 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 INHBEP58166 350 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 NLRP5P59047 1200 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 NUCB2P80303 420 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 FUT2Q10981 343 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 COG2Q14746 738 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 QRICH1Q2TAL8 776 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 DEFB115Q30KQ5 88 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 WWC2Q6AWC2 1192 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 MCTP1Q6DN14 999 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 CYP4F22Q6NT55 531 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 CATSPERGQ6ZRH7 1159 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 NUDT18Q6ZVK8 323 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 NBPF11Q86T75 865 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 CCAR1Q8IX12 1150 aaKnown RBP7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 CPXCR1Q8N123 301 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 FAM177A1Q8N128 213 aaPredicted RBP7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 BICD2Q8TD16 824 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 BRI3BPQ8WY22 251 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 CUL5Q93034 780 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 ATG4CQ96DT6 458 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 CAPNS2Q96L46 248 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 PAGR1Q9BTK6 254 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 GLT8D2Q9H1C3 349 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 ASCC2Q9H1I8 757 aaPredicted RBP7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 RANBP17Q9H2T7 1088 aaKnown RBP7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 SH3GLB2Q9NR46 395 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 BARHL2Q9NY43 387 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 VPS54Q9P1Q0 977 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 SLC45A1Q9Y2W3 748 aa7.57□□□□□ -1.2
CTDNEP1-204ENST00000570484 ABCB11O95342 1321 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 BTBD19C9JJ37 291 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 VWA5AO00534 786 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 DTNBO60941 627 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 ICAM1P05362 532 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 SYT1P21579 422 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 GNA11P29992 359 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 HOXA7P31268 230 aaPredicted RBP7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 COPB2P35606 906 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 KRT2P35908 639 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 OAZ1P54368 228 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 SNAP25P60880 206 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 HERVK_113P62684 666 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 CCNA1P78396 465 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 GUCY1B3Q02153 619 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 TAF1CQ15572 869 aaPredicted RBP7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 SNRNP48Q6IEG0 339 aaKnown RBP7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 PARP9Q8IXQ6 854 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 REPIN1Q9BWE0 567 aaKnown RBP7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 TEX13BQ9BXU2 312 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 SLC38A10Q9HBR0 1119 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 RAVER2Q9HCJ3 691 aaKnown RBP7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 C6orf50Q9HD87 102 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 ZCCHC17Q9NP64 241 aaKnown RBP7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 HOMER2Q9NSB8 354 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 CHMP5Q9NZZ3 219 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 MRPL11Q9Y3B7 192 aaKnown RBP7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 PCDHA1Q9Y5I3 950 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 ATP6V1DQ9Y5K8 247 aa7.56□□□□□ -1.2
CTDNEP1-204ENST00000570484 TRPM7Q96QT4 1865 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 MYH4Q9Y623 1939 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 ESYT2A0FGR8 921 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 STXBP3O00186 592 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 ALDH1A1P00352 501 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 MMP1P03956 469 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 CYP2C8P10632 490 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 ALAS1P13196 640 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 FDPSP14324 419 aaKnown RBP7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 GCLCP48506 637 aaPredicted RBP7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 PKN1Q16512 942 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 TKFCQ3LXA3 575 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 WDR78Q5VTH9 848 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 KRT40Q6A162 431 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 GALNT17Q6IS24 598 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 GPAT2Q6NUI2 795 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 ADGRD1Q6QNK2 874 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 LAPTM4BQ86VI4 370 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 MCF2L2Q86YR7 1114 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 DIS3L2Q8IYB7 885 aaKnown RBP7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 REXO1Q8N1G1 1221 aaKnown RBP7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 FAM43AQ8N2R8 423 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 FBXO18Q8NFZ0 1043 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 COA7Q96BR5 231 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 MTMR8Q96EF0 704 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 AIFM3Q96NN9 605 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 EHMT1Q9H9B1 1298 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 RNF146Q9NTX7 359 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 FBXO40Q9UH90 709 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 RABGAP1Q9Y3P9 1069 aa7.55□□□□□ -1.2
CTDNEP1-204ENST00000570484 CCDC194A0A1B0GVG4 234 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms