RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 MPHOSPH6Q99547 160 aaKnown RBP19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 ABCB11O95342 1321 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 DCDC2CA8MYV0 355 aa19.96■□□□□ 0.79
MAP1LC3B-208ENST00000570189 GHRHRQ02643 423 aa19.96■□□□□ 0.79
MAP1LC3B-208ENST00000570189 CYB5R4Q7L1T6 521 aa19.96■□□□□ 0.79
MAP1LC3B-208ENST00000570189 FBXO16Q8IX29 292 aaPredicted RBP19.96■□□□□ 0.79
MAP1LC3B-208ENST00000570189 MTMR8Q96EF0 704 aa19.96■□□□□ 0.79
MAP1LC3B-208ENST00000570189 PURBQ96QR8 312 aaKnown RBP19.96■□□□□ 0.79
MAP1LC3B-208ENST00000570189 UBA5Q9GZZ9 404 aa19.96■□□□□ 0.79
MAP1LC3B-208ENST00000570189 PRDM5Q9NQX1 630 aaPredicted RBP19.96■□□□□ 0.79
MAP1LC3B-208ENST00000570189 B4DLN1 442 aa19.95■□□□□ 0.78
MAP1LC3B-208ENST00000570189 ARVCFO00192 962 aa19.95■□□□□ 0.78
MAP1LC3B-208ENST00000570189 PQBP1O60828 265 aaKnown RBP19.95■□□□□ 0.78
MAP1LC3B-208ENST00000570189 MRPL12P52815 198 aaKnown RBP19.95■□□□□ 0.78
MAP1LC3B-208ENST00000570189 IRX5P78411 483 aaPredicted RBP19.95■□□□□ 0.78
MAP1LC3B-208ENST00000570189 FSCN1Q16658 493 aaKnown RBP19.95■□□□□ 0.78
MAP1LC3B-208ENST00000570189 BADQ92934 168 aa19.95■□□□□ 0.78
MAP1LC3B-208ENST00000570189 JMJD4Q9H9V9 463 aa19.95■□□□□ 0.78
MAP1LC3B-208ENST00000570189 PDGFCQ9NRA1 345 aa19.95■□□□□ 0.78
MAP1LC3B-208ENST00000570189 TBX21Q9UL17 535 aa19.95■□□□□ 0.78
MAP1LC3B-208ENST00000570189 SCN10AQ9Y5Y9 1956 aa19.95■□□□□ 0.78
MAP1LC3B-208ENST00000570189 PALM3A6NDB9 673 aaPredicted RBP19.94■□□□□ 0.78
MAP1LC3B-208ENST00000570189 NKRFO15226 690 aaKnown RBP eCLIP19.94■□□□□ 0.783e-6■■□□□ 12.3
MAP1LC3B-208ENST00000570189 ZEB2O60315 1214 aa19.94■□□□□ 0.78
MAP1LC3B-208ENST00000570189 ITGB8P26012 769 aa19.94■□□□□ 0.78
MAP1LC3B-208ENST00000570189 FAM109BQ6ICB4 259 aaPredicted RBP19.94■□□□□ 0.78
MAP1LC3B-208ENST00000570189 NCOA7Q8NI08 942 aa19.94■□□□□ 0.78
MAP1LC3B-208ENST00000570189 MTA3Q9BTC8 594 aa19.94■□□□□ 0.78
MAP1LC3B-208ENST00000570189 AP5M1Q9H0R1 490 aa19.94■□□□□ 0.78
MAP1LC3B-208ENST00000570189 CPVLQ9H3G5 476 aa19.94■□□□□ 0.78
MAP1LC3B-208ENST00000570189 E7EWF7 191 aa19.93■□□□□ 0.78
MAP1LC3B-208ENST00000570189 CALML3P27482 149 aa19.93■□□□□ 0.78
MAP1LC3B-208ENST00000570189 QRICH1Q2TAL8 776 aa19.93■□□□□ 0.78
MAP1LC3B-208ENST00000570189 KIAA1211Q6ZU35 1233 aa19.93■□□□□ 0.78
MAP1LC3B-208ENST00000570189 MCF2L2Q86YR7 1114 aa19.93■□□□□ 0.78
MAP1LC3B-208ENST00000570189 FAM126BQ8IXS8 530 aa19.93■□□□□ 0.78
MAP1LC3B-208ENST00000570189 SAMD3Q8N6K7 520 aa19.93■□□□□ 0.78
MAP1LC3B-208ENST00000570189 TMEM39AQ9NV64 488 aa19.93■□□□□ 0.78
MAP1LC3B-208ENST00000570189 MAD2L2Q9UI95 211 aa19.93■□□□□ 0.78
MAP1LC3B-208ENST00000570189 MRPL11Q9Y3B7 192 aaKnown RBP19.93■□□□□ 0.78
MAP1LC3B-208ENST00000570189 DDX49Q9Y6V7 483 aaKnown RBP19.93■□□□□ 0.78
MAP1LC3B-208ENST00000570189 COL6A3P12111 3177 aa19.92■□□□□ 0.78
MAP1LC3B-208ENST00000570189 TIMP1P01033 207 aa19.92■□□□□ 0.78
MAP1LC3B-208ENST00000570189 CD4P01730 458 aa19.92■□□□□ 0.78
MAP1LC3B-208ENST00000570189 RAG1P15918 1043 aa19.92■□□□□ 0.78
MAP1LC3B-208ENST00000570189 USH1GQ495M9 461 aa19.92■□□□□ 0.78
MAP1LC3B-208ENST00000570189 NOL8Q76FK4 1167 aaKnown RBP19.92■□□□□ 0.78
MAP1LC3B-208ENST00000570189 EEPD1Q7L9B9 569 aa19.92■□□□□ 0.78
MAP1LC3B-208ENST00000570189 FBXO11Q86XK2 927 aa19.92■□□□□ 0.78
MAP1LC3B-208ENST00000570189 WDR11Q9BZH6 1224 aa19.92■□□□□ 0.78
MAP1LC3B-208ENST00000570189 MAP3K20Q9NYL2 800 aaKnown RBP19.92■□□□□ 0.78
MAP1LC3B-208ENST00000570189 KLRF2D3W0D1 207 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 DYNC1LI2O43237 492 aaPredicted RBP19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 BEX3Q00994 111 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 PDE4DQ08499 809 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 TROAPQ12815 778 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 GRM4Q14833 912 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 SART3Q15020 963 aaKnown RBP19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 STOX1Q6ZVD7 989 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 CENPQQ7L2Z9 268 aaPredicted RBP19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 RALYLQ86SE5 291 aaKnown RBP19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 STAG2Q8N3U4 1231 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 SCFD2Q8WU76 684 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 IWS1Q96ST2 819 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 AMNQ9BXJ7 453 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 RIOX1Q9H6W3 641 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 TAF6LQ9Y6J9 622 aa19.91■□□□□ 0.78
MAP1LC3B-208ENST00000570189 BAZ2BQ9UIF8 2168 aaKnown RBP19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 ERICH2A1L162 156 aa19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 ZBTB5O15062 677 aa19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 TLR3O15455 904 aaKnown RBP19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 CPT1AP50416 773 aa19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 FPGSQ05932 587 aa19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 TRAF1Q13077 416 aa19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 SHHQ15465 462 aa19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 BMP2KLQ5H9B9 411 aa19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 MFSD5Q6N075 450 aa19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 CXCL17Q6UXB2 119 aa19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 MB21D2Q8IYB1 491 aaPredicted RBP19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 SYTL5Q8TDW5 730 aaPredicted RBP19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 NSUN6Q8TEA1 469 aaKnown RBP19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 MAP3K14Q99558 947 aa19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 RBM8AQ9Y5S9 174 aaKnown RBP19.9■□□□□ 0.78
MAP1LC3B-208ENST00000570189 IFIT3O14879 490 aaKnown RBP19.89■□□□□ 0.77
MAP1LC3B-208ENST00000570189 GRIN2DO15399 1336 aa19.89■□□□□ 0.77
MAP1LC3B-208ENST00000570189 HSD17B4P51659 736 aa19.89■□□□□ 0.77
MAP1LC3B-208ENST00000570189 ITGA7Q13683 1181 aa19.89■□□□□ 0.77
MAP1LC3B-208ENST00000570189 PPP2R5BQ15173 497 aa19.89■□□□□ 0.77
MAP1LC3B-208ENST00000570189 C9orf50Q5SZB4 431 aa19.89■□□□□ 0.77
MAP1LC3B-208ENST00000570189 TMEM63BQ5T3F8 832 aa19.89■□□□□ 0.77
MAP1LC3B-208ENST00000570189 IGDCC4Q8TDY8 1250 aa19.89■□□□□ 0.77
MAP1LC3B-208ENST00000570189 LSG1Q9H089 658 aaKnown RBP19.89■□□□□ 0.77
MAP1LC3B-208ENST00000570189 POLR3EQ9NVU0 708 aa19.89■□□□□ 0.77
MAP1LC3B-208ENST00000570189 OPLAHO14841 1288 aa19.88■□□□□ 0.77
MAP1LC3B-208ENST00000570189 ANTXR2P58335 489 aa19.88■□□□□ 0.77
MAP1LC3B-208ENST00000570189 SMAD3P84022 425 aaKnown RBP19.88■□□□□ 0.77
MAP1LC3B-208ENST00000570189 WTAPQ15007 396 aa19.88■□□□□ 0.77
MAP1LC3B-208ENST00000570189 DEFB123Q8N688 67 aa19.88■□□□□ 0.77
MAP1LC3B-208ENST00000570189 VTI1AQ96AJ9 217 aa19.88■□□□□ 0.77
MAP1LC3B-208ENST00000570189 ESYT1Q9BSJ8 1104 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms