RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 DNERQ8NFT8 737 aa14.54□□□□□ -0.08
SCAMP2-212ENST00000569904 PURBQ96QR8 312 aaKnown RBP14.54□□□□□ -0.08
SCAMP2-212ENST00000569904 DDX49Q9Y6V7 483 aaKnown RBP14.54□□□□□ -0.08
SCAMP2-212ENST00000569904 GRIN2DO15399 1336 aa14.54□□□□□ -0.08
SCAMP2-212ENST00000569904 TLR3O15455 904 aaKnown RBP14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 ZEB2O60315 1214 aa14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 TMEM63BQ5T3F8 832 aa14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 CXCL17Q6UXB2 119 aa14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 RNF207Q6ZRF8 634 aa14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 PNMA1Q8ND90 353 aa14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 RNPC3Q96LT9 517 aaKnown RBP14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 AP5M1Q9H0R1 490 aa14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 TTYH1Q9H313 450 aaPredicted RBP14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 SEMA6BQ9H3T3 888 aa14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 PRUNE2Q8WUY3 3088 aa14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 SPTBN5Q9NRC6 3674 aaKnown RBP14.53□□□□□ -0.08
SCAMP2-212ENST00000569904 GBF1Q92538 1859 aa14.52□□□□□ -0.08
SCAMP2-212ENST00000569904 DYNC1LI2O43237 492 aaPredicted RBP14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 KDM4AO75164 1064 aa14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 PTGS1P23219 599 aa14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 RPS6P62753 249 aaKnown RBP14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 PPIGQ13427 754 aaKnown RBP eCLIP14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 ITGA7Q13683 1181 aa14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 IMMTQ16891 758 aaKnown RBP14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 KIAA1211Q6ZU35 1233 aa14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 C16orf59Q7L2K0 433 aa14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 EEPD1Q7L9B9 569 aa14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 ENAHQ8N8S7 591 aaPredicted RBP14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 ZSCAN10Q96SZ4 725 aaPredicted RBP14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.52□□□□□ -0.095e-6■□□□□ 8.9
SCAMP2-212ENST00000569904 ZKSCAN3Q9BRR0 538 aa14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 IL25Q9H293 177 aa14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 ZSWIM5Q9P217 1185 aa14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 CTNNA3Q9UI47 895 aa14.52□□□□□ -0.09
SCAMP2-212ENST00000569904 TANC1Q9C0D5 1861 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 TNKSO95271 1327 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 RAD50Q92878 1312 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 PTPDC1A2A3K4 754 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 B4E1Z4 1266 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 NKRFO15226 690 aaKnown RBP eCLIP14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 GSPT1P15170 499 aaKnown RBP14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 PDE4AP27815 886 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 ASPRV1Q53RT3 343 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 TMEM240Q5SV17 173 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 NOL8Q76FK4 1167 aaKnown RBP14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 TMEM199Q8N511 208 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 VTI1AQ96AJ9 217 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 WDR11Q9BZH6 1224 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 KRT23Q9C075 422 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 CNNM2Q9H8M5 875 aa14.51□□□□□ -0.09
SCAMP2-212ENST00000569904 ABCB11O95342 1321 aa14.5□□□□□ -0.09
SCAMP2-212ENST00000569904 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.5□□□□□ -0.09
SCAMP2-212ENST00000569904 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.5□□□□□ -0.09
SCAMP2-212ENST00000569904 GOLGA8HP0CJ92 632 aa14.5□□□□□ -0.09
SCAMP2-212ENST00000569904 CSF2RAP15509 400 aa14.5□□□□□ -0.09
SCAMP2-212ENST00000569904 PURAQ00577 322 aaKnown RBP14.5□□□□□ -0.09
SCAMP2-212ENST00000569904 FAM161BQ96MY7 647 aa14.5□□□□□ -0.09
SCAMP2-212ENST00000569904 MPHOSPH6Q99547 160 aaKnown RBP14.5□□□□□ -0.09
SCAMP2-212ENST00000569904 CDX2Q99626 313 aaPredicted RBP14.5□□□□□ -0.09
SCAMP2-212ENST00000569904 KAT14Q9H8E8 782 aa14.5□□□□□ -0.09
SCAMP2-212ENST00000569904 POLR3EQ9NVU0 708 aa14.5□□□□□ -0.09
SCAMP2-212ENST00000569904 CALML3P27482 149 aa14.49□□□□□ -0.09
SCAMP2-212ENST00000569904 CPT1AP50416 773 aa14.49□□□□□ -0.09
SCAMP2-212ENST00000569904 GHRHRQ02643 423 aa14.49□□□□□ -0.09
SCAMP2-212ENST00000569904 SEC23AQ15436 765 aa14.49□□□□□ -0.09
SCAMP2-212ENST00000569904 CDC37Q16543 378 aaPredicted RBP14.49□□□□□ -0.09
SCAMP2-212ENST00000569904 TTC22Q5TAA0 569 aa14.49□□□□□ -0.09
SCAMP2-212ENST00000569904 PSRC1Q6PGN9 363 aaPredicted RBP14.49□□□□□ -0.09
SCAMP2-212ENST00000569904 ADGRF4Q8IZF3 695 aa14.49□□□□□ -0.09
SCAMP2-212ENST00000569904 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
SCAMP2-212ENST00000569904 CHD9Q3L8U1 2897 aa14.49□□□□□ -0.09
SCAMP2-212ENST00000569904 A6NJR5 290 aa14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 B4DLN1 442 aa14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 B4GALT4O60513 344 aa14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 DNAJB2P25686 324 aa14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 MRPL12P52815 198 aaKnown RBP14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 PDE4DQ08499 809 aa14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 SCFD2Q8WU76 684 aa14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 MTMR8Q96EF0 704 aa14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 NOC4LQ9BVI4 516 aaKnown RBP14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 ALDH8A1Q9H2A2 487 aaPredicted RBP14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 CPVLQ9H3G5 476 aa14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 HIPK3Q9H422 1215 aa14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 IL23AQ9NPF7 189 aa14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 SUPT16HQ9Y5B9 1047 aaKnown RBP14.48□□□□□ -0.09
SCAMP2-212ENST00000569904 DLL1O00548 723 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 KPNA6O60684 536 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 PARP1P09874 1014 aaKnown RBP14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 CYP2C18P33260 490 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 PSMC6P62333 389 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 PPP2R5BQ15173 497 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 QRICH1Q2TAL8 776 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 USH1GQ495M9 461 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 CCDC62Q6P9F0 684 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 ZNF365Q70YC5 407 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 OR6J1Q8NGC5 347 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 HERVK_113Q902F9 699 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 IWS1Q96ST2 819 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 PPP1R12CQ9BZL4 782 aa14.47□□□□□ -0.09
SCAMP2-212ENST00000569904 JMJD4Q9H9V9 463 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms