RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 FAM133AQ8N9E0 248 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 TMEM87BQ96K49 555 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 TAAR1Q96RJ0 339 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 SENP6Q9GZR1 1112 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 CRISPLD2Q9H0B8 497 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 PDGFCQ9NRA1 345 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 BRPF3Q9ULD4 1205 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 FRMPD3Q5JV73 1810 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 ASTN1O14525 1302 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 LCTP09848 1927 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 KLF18A0A0U1RQI7 1052 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 SEPT4O43236 478 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 SORBS3O60504 671 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 DTNBO60941 627 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 DDAH1O94760 285 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 ZNF865P0CJ78 1059 aaPredicted RBP10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 HOXA13P31271 388 aaPredicted RBP10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 ADCYAP1R1P41586 468 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 NT5C2P49902 561 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 EXOSC10Q01780 885 aaKnown RBP10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 ACVR2BQ13705 512 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 KRT32Q14532 448 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 CCDC144BQ3MJ40 725 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 NECAB2Q7Z6G3 386 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 BRF1Q92994 677 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 AMNQ9BXJ7 453 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 USP26Q9BXU7 913 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 UPF3BQ9BZI7 483 aaKnown RBP10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 C11orf49Q9H6J7 331 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 OGDHLQ9ULD0 1010 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 DIS3Q9Y2L1 958 aaKnown RBP10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 PCDHA1Q9Y5I3 950 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 PFASO15067 1338 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 ABCB11O95342 1321 aa10.47□□□□□ -0.73
GTF3C1-210ENST00000569394 MYADML2A6NDP7 307 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 GOLGA8AA7E2F4 631 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 GOLGA8BA8MQT2 603 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 ZBTB5O15062 677 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 ADCY6O43306 1168 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 SEC24BO95487 1268 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 RARBP10826 455 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 SYN1P17600 705 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 KIF5BP33176 963 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 ALDH5A1P51649 535 aaPredicted RBP10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 PDE4DQ08499 809 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 NBR1Q14596 966 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 FCHSD1Q86WN1 690 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 C7orf61Q8IZ16 206 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 SRBD1Q8N5C6 995 aaKnown RBP10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 RRP36Q96EU6 259 aaKnown RBP10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 XPNPEP3Q9NQH7 507 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 COL20A1Q9P218 1284 aa10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 MRPL11Q9Y3B7 192 aaKnown RBP10.46□□□□□ -0.73
GTF3C1-210ENST00000569394 WDR19Q8NEZ3 1342 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 SYNGAP1Q96PV0 1343 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 ASB14A6NK59 587 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 KBTBD13C9JR72 458 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 ZBTB43O43298 467 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 EVI5O60447 810 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 IGHA2P01877 340 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 C6orf222P0C671 652 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 MYCLP12524 364 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 AKR1A1P14550 325 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 EIF2AK2P19525 551 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 RPS6KB1P23443 525 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 LIFRP42702 1097 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 CHMP4BP1P59074 171 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 CCT2P78371 535 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 BEX3Q00994 111 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 STK3Q13188 491 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 RTN1Q16799 776 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 APOA5Q6Q788 366 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 MAMDC4Q6UXC1 1216 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 SEPT14Q6ZU15 432 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 TMTC2Q8N394 836 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 FANCBQ8NB91 859 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 VTI1AQ96AJ9 217 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 HTATIP2Q9BUP3 242 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 ABHD16BQ9H3Z7 469 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 RIOX1Q9H6W3 641 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 ADD3Q9UEY8 706 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 SEC63Q9UGP8 760 aaKnown RBP10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 FAM184BQ9ULE4 1060 aa10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 ZMYND8Q9ULU4 1186 aaPredicted RBP10.45□□□□□ -0.74
GTF3C1-210ENST00000569394 SYNRGQ9UMZ2 1314 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 PNMA6FA0A0J9YX94 578 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 H0YGN5 161 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 DYNC1LI2O43237 492 aaPredicted RBP10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 CALM1P0DP23 149 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 CALM2P0DP24 149 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 CALM3P0DP25 149 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 PSMA5P28066 241 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 CDC27P30260 824 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 TNFAIP2Q03169 654 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 LRRC41Q15345 812 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 TSGA10IPQ3SY00 556 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 ARHGEF16Q5VV41 709 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 HEATR3Q7Z4Q2 680 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms