RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 PPIGQ13427 754 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TJAP1Q5JTD0 557 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 GNASQ5JWF2 1037 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TAPT1Q6NXT6 567 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 CXCL17Q6UXB2 119 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TLK2Q86UE8 772 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 FBXO16Q8IX29 292 aaPredicted RBP13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 ANKRD35Q8N283 1001 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PCSK9Q8NBP7 692 aaKnown RBP13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 HERVK_113Q902F9 699 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 CHMP4CQ96CF2 233 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 GMCL1Q96IK5 515 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 SALL3Q9BXA9 1300 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 DCTPP1Q9H773 170 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 ACAD9Q9H845 621 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 INCENPQ9NQS7 918 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 IL17RBQ9NRM6 502 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 RNF146Q9NTX7 359 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 SCN10AQ9Y5Y9 1956 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TMEM232C9JQI7 657 aa13.25□□□□□ -0.29
CHRFAM7A-206ENST00000569278 B4GALT4O60513 344 aa13.25□□□□□ -0.29
CHRFAM7A-206ENST00000569278 ANP32AP39687 249 aaKnown RBP13.25□□□□□ -0.29
CHRFAM7A-206ENST00000569278 NOC4LQ9BVI4 516 aaKnown RBP13.25□□□□□ -0.29
CHRFAM7A-206ENST00000569278 IL23AQ9NPF7 189 aa13.25□□□□□ -0.29
CHRFAM7A-206ENST00000569278 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.25□□□□□ -0.29
CHRFAM7A-206ENST00000569278 FBXO40Q9UH90 709 aa13.25□□□□□ -0.29
CHRFAM7A-206ENST00000569278 NCOR1O75376 2440 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PATL2C9JE40 543 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 STAT2P52630 851 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PSMC6P62333 389 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PPARAQ07869 468 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 ZMYM1Q5SVZ6 1142 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PSRC1Q6PGN9 363 aaPredicted RBP13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 CCDC129Q6ZRS4 1044 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 KCTD1Q719H9 257 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 MORC4Q8TE76 937 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TRPV6Q9H1D0 765 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 NKX2-4Q9H2Z4 354 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 CYP39A1Q9NYL5 469 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 RAPGEFL1Q9UHV5 662 aa13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 COL4A4P53420 1690 aaPredicted RBP13.24□□□□□ -0.29
CHRFAM7A-206ENST00000569278 ZFYP08048 801 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 MYOGP15173 224 aa13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 GNAT2P19087 354 aa13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 MCCP23508 829 aa13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TFAP4Q01664 338 aa13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TNFAIP2Q03169 654 aa13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 ITGA7Q13683 1181 aa13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 FSCN1Q16658 493 aaKnown RBP13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 AKNAD1Q5T1N1 836 aa13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TMEM199Q8N511 208 aa13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 STAG1Q8WVM7 1258 aa13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 HIPK3Q9H422 1215 aa13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PRR12Q9ULL5 1215 aa13.23□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PLA2G6O60733 806 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 ARHGEF15O94989 841 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TSPY3P0CV98 308 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TSPY8P0CW00 308 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 RABGGTBP53611 331 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 CCL23P55773 120 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 CTDSPL2Q05D32 466 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 VPS53Q5VIR6 699 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 CCDC174Q6PII3 467 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 EEPD1Q7L9B9 569 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TRERF1Q96PN7 1200 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TET1Q8NFU7 2136 aa13.22□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TNFRSF10AO00220 468 aa13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 NFIBO00712 420 aa13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 ALAS1P13196 640 aa13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 SLC1A4P43007 532 aa13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TTBK2Q6IQ55 1244 aa13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 OTOP2Q7RTS6 562 aa13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 FAM160B2Q86V87 743 aa13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PPM1EQ8WY54 764 aa13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 SYMPKQ92797 1274 aaKnown RBP13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 SCLYQ96I15 445 aa13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 RANBP17Q9H2T7 1088 aaKnown RBP13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 SPC25Q9HBM1 224 aa13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 THEGQ9P2T0 379 aa13.21□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PRRC2BQ5JSZ5 2229 aaKnown RBP13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TTC41PQ6P2S7 1318 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 EPOPA6NHQ4 379 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TLR3O15455 904 aaKnown RBP13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 DYNC1LI2O43237 492 aaPredicted RBP13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 APPP05067 770 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 FGRP09769 529 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 FDX1P10109 184 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 NUCB1Q02818 461 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TTLL4Q14679 1199 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TKFCQ3LXA3 575 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TMEM92Q6UXU6 159 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 SLC30A10Q6XR72 485 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 PPP1R13LQ8WUF5 828 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 VTI1AQ96AJ9 217 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ASB2Q96Q27 587 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 NAPBQ9H115 298 aa13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ALDH8A1Q9H2A2 487 aaPredicted RBP13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TRMT13Q9NUP7 481 aaKnown RBP13.2□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TCF20Q9UGU0 1960 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms