RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	CBX2	Q14781	532 aa	Predicted RBP	5	□□□□□ -1.61
BBS4-215	ENST00000569001	ZNF385B	Q569K4	471 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	MRM1	Q6IN84	353 aa	Known RBP	5	□□□□□ -1.61
BBS4-215	ENST00000569001	ZC3H14	Q6PJT7	736 aa	Known RBP	5	□□□□□ -1.61
BBS4-215	ENST00000569001	AMIGO3	Q86WK7	504 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	BVES	Q8NE79	360 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	BTN2A2	Q8WVV5	523 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	RCC1L	Q96I51	464 aa	Known RBP	5	□□□□□ -1.61
BBS4-215	ENST00000569001	APBA2	Q99767	749 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	TINF2	Q9BSI4	451 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	ZNF408	Q9H9D4	720 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	BTG4	Q9NY30	223 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	ACTR10	Q9NZ32	417 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	STRIP2	Q9ULQ0	834 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	EMC9	Q9Y3B6	208 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	SIT1	Q9Y3P8	196 aa		5	□□□□□ -1.61
BBS4-215	ENST00000569001	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	RFXAP	O00287	272 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	ABLIM1	O14639	778 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	TRIM13	O60858	407 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	DDAH1	O94760	285 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	CYBB	P04839	570 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	GLI4	P10075	376 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	ATF2	P15336	505 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	DNAJA1	P31689	397 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	MAPKAPK2	P49137	400 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	AFF3	P51826	1226 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	GRB10	Q13322	594 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	SF1	Q15637	639 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	INF2	Q27J81	1249 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	PRSS53	Q2L4Q9	553 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	KRTAP19-4	Q3LI73	84 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	GTF2IRD2B	Q6EKJ0	949 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	CNKSR3	Q6P9H4	555 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	PAQR3	Q6TCH7	311 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	GTF2IRD2	Q86UP8	949 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	FAM129C	Q86XR2	697 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	MCF2L2	Q86YR7	1114 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	SIAH1	Q8IUQ4	282 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	FAM178B	Q8IXR5	827 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	ADGRG2	Q8IZP9	1017 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	DACT3	Q96B18	629 aa	Predicted RBP	4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	PWWP2A	Q96N64	755 aa		4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	DBR1	Q9UK59	544 aa	Known RBP	4.99	□□□□□ -1.61
BBS4-215	ENST00000569001	C7orf72	A4D263	438 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	FUCA1	P04066	466 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	ITGAV	P06756	1048 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	THBD	P07204	575 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	FGR	P09769	529 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	PAM	P19021	973 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	FBLN1	P23142	703 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	SV2C	Q496J9	727 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	TCERG1L	Q5VWI1	586 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	OLFML2B	Q68BL8	750 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	TTLL10	Q6ZVT0	673 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	LZTR1	Q8N653	840 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	SYT8	Q8NBV8	401 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	DPF3	Q92784	378 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	MRGPRX3	Q96LB0	322 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	SYT3	Q9BQG1	590 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	MTA3	Q9BTC8	594 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	ST7	Q9NRC1	585 aa		4.98	□□□□□ -1.61
BBS4-215	ENST00000569001	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.98	□□□□□ -1.61
BBS4-215	ENST00000569001		A0A1B0GTL3	188 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	ARNTL	O00327	626 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	NOP56	O00567	594 aa	Known RBP	4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	SRGAP3	O43295	1099 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	GJB6	O95452	261 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	HOXA5	P20719	270 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	ECI1	P42126	302 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	NR1I3	Q14994	352 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	NCAPH	Q15003	741 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	ZNF227	Q86WZ6	799 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	VPS37D	Q86XT2	251 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	TEX2	Q8IWB9	1127 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	TRIM59	Q8IWR1	403 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	CELF2-AS1	Q8N7Q2	184 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	FEZF2	Q8TBJ5	459 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	USP33	Q8TEY7	942 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	FRS2	Q8WU20	508 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	COPS5	Q92905	334 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	C20orf173	Q96LM9	149 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	ZCCHC4	Q9H5U6	513 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	MARCH2	Q9P0N8	246 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	LRP2BP	Q9P2M1	347 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	PRKAG3	Q9UGI9	489 aa		4.97	□□□□□ -1.61
BBS4-215	ENST00000569001	SUSD5	O60279	629 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	PLA2G1B	P04054	148 aa	Known RBP	4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	NTRK1	P04629	796 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	ASGR2	P07307	311 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	IGFBP6	P24592	240 aa	Predicted RBP	4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	FPR2	P25090	351 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	PML	P29590	882 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	CORO7	P57737	925 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	TMEM62	Q0P6H9	643 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	LILRA6	Q6PI73	481 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	CCDC103	Q8IW40	242 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	ZDHHC14	Q8IZN3	488 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	NLGN2	Q8NFZ4	835 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms