RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 VPS53Q5VIR6 699 aa17.64■□□□□ 0.41
USB1-214ENST00000568848 SLC30A10Q6XR72 485 aa17.64■□□□□ 0.41
USB1-214ENST00000568848 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
USB1-214ENST00000568848 PTPRSQ13332 1948 aa17.63■□□□□ 0.41
USB1-214ENST00000568848 ASB14A6NK59 587 aa17.63■□□□□ 0.41
USB1-214ENST00000568848 MS4A1P11836 297 aa17.63■□□□□ 0.41
USB1-214ENST00000568848 BMP1P13497 986 aa17.63■□□□□ 0.41
USB1-214ENST00000568848 ATP2A2P16615 1042 aaKnown RBP17.63■□□□□ 0.41
USB1-214ENST00000568848 FAM47CQ5HY64 1035 aa17.63■□□□□ 0.41
USB1-214ENST00000568848 GMCL1Q96IK5 515 aa17.63■□□□□ 0.41
USB1-214ENST00000568848 NAPBQ9H115 298 aa17.63■□□□□ 0.41
USB1-214ENST00000568848 TNKSO95271 1327 aa17.63■□□□□ 0.41
USB1-214ENST00000568848 FAM160B2Q86V87 743 aa17.62■□□□□ 0.41
USB1-214ENST00000568848 PI4K2BQ8TCG2 481 aa17.62■□□□□ 0.41
USB1-214ENST00000568848 CHURC1Q8WUH1 139 aa17.62■□□□□ 0.41
USB1-214ENST00000568848 FSD1Q9BTV5 496 aa17.62■□□□□ 0.41
USB1-214ENST00000568848 GPCPD1Q9NPB8 672 aa17.62■□□□□ 0.41
USB1-214ENST00000568848 RCAN3Q9UKA8 241 aa17.62■□□□□ 0.41
USB1-214ENST00000568848 BRWD1Q9NSI6 2320 aa17.61■□□□□ 0.41
USB1-214ENST00000568848 TSPY2A6NKD2 308 aa17.61■□□□□ 0.41
USB1-214ENST00000568848 CALML3P27482 149 aa17.61■□□□□ 0.41
USB1-214ENST00000568848 ALDH5A1P51649 535 aaPredicted RBP17.61■□□□□ 0.41
USB1-214ENST00000568848 PDE4BQ07343 736 aa17.61■□□□□ 0.41
USB1-214ENST00000568848 RCSD1Q6JBY9 416 aa17.61■□□□□ 0.41
USB1-214ENST00000568848 IL27Q8NEV9 243 aa17.61■□□□□ 0.41
USB1-214ENST00000568848 ARNTL2Q8WYA1 636 aa17.61■□□□□ 0.41
USB1-214ENST00000568848 KHSRPQ92945 711 aaKnown RBP eCLIP17.61■□□□□ 0.41
USB1-214ENST00000568848 WDR11Q9BZH6 1224 aa17.61■□□□□ 0.41
USB1-214ENST00000568848 MTIF3Q9H2K0 278 aaKnown RBP17.61■□□□□ 0.41
USB1-214ENST00000568848 EPHX3Q9H6B9 360 aa17.61■□□□□ 0.41
USB1-214ENST00000568848 COL4A4P53420 1690 aaPredicted RBP17.61■□□□□ 0.41
USB1-214ENST00000568848 PTPDC1A2A3K4 754 aa17.6■□□□□ 0.41
USB1-214ENST00000568848 RANBP6O60518 1105 aaKnown RBP17.6■□□□□ 0.41
USB1-214ENST00000568848 CABYRO75952 493 aa17.6■□□□□ 0.41
USB1-214ENST00000568848 GNAT2P19087 354 aa17.6■□□□□ 0.41
USB1-214ENST00000568848 PURAQ00577 322 aaKnown RBP17.6■□□□□ 0.41
USB1-214ENST00000568848 NBPF20Q3BBV1 942 aa17.6■□□□□ 0.41
USB1-214ENST00000568848 ZMYM1Q5SVZ6 1142 aa17.6■□□□□ 0.41
USB1-214ENST00000568848 IQSEC1Q6DN90 963 aa17.6■□□□□ 0.41
USB1-214ENST00000568848 OR6J1Q8NGC5 347 aa17.6■□□□□ 0.41
USB1-214ENST00000568848 CPVLQ9H3G5 476 aa17.6■□□□□ 0.41
USB1-214ENST00000568848 DCTPP1Q9H773 170 aa17.6■□□□□ 0.41
USB1-214ENST00000568848 PCDHA11Q9Y5I1 949 aa17.6■□□□□ 0.41
USB1-214ENST00000568848 MTCH2Q9Y6C9 303 aa17.6■□□□□ 0.41
USB1-214ENST00000568848 TRIP12Q14669 1992 aaPredicted RBP17.59■□□□□ 0.41
USB1-214ENST00000568848 TANC1Q9C0D5 1861 aa17.59■□□□□ 0.41
USB1-214ENST00000568848 LCHNA4D1U4 455 aa17.59■□□□□ 0.41
USB1-214ENST00000568848 ARIH2O95376 493 aa17.59■□□□□ 0.41
USB1-214ENST00000568848 ZFYP08048 801 aaPredicted RBP17.59■□□□□ 0.41
USB1-214ENST00000568848 TCTN1Q2MV58 587 aa17.59■□□□□ 0.41
USB1-214ENST00000568848 TKFCQ3LXA3 575 aa17.59■□□□□ 0.41
USB1-214ENST00000568848 RRP12Q5JTH9 1297 aaKnown RBP17.59■□□□□ 0.41
USB1-214ENST00000568848 ZNF287Q9HBT7 754 aa17.59■□□□□ 0.41
USB1-214ENST00000568848 VTA1Q9NP79 307 aa17.59■□□□□ 0.41
USB1-214ENST00000568848 SCN10AQ9Y5Y9 1956 aa17.59■□□□□ 0.41
USB1-214ENST00000568848 ZEB2O60315 1214 aa17.58■□□□□ 0.4
USB1-214ENST00000568848 ICAM1P05362 532 aa17.58■□□□□ 0.4
USB1-214ENST00000568848 DUSP28Q4G0W2 176 aa17.58■□□□□ 0.4
USB1-214ENST00000568848 TMEM67Q5HYA8 995 aa17.58■□□□□ 0.4
USB1-214ENST00000568848 MORC4Q8TE76 937 aa17.58■□□□□ 0.4
USB1-214ENST00000568848 CLEC4DQ8WXI8 215 aa17.58■□□□□ 0.4
USB1-214ENST00000568848 GPATCH3Q96I76 525 aa17.58■□□□□ 0.4
USB1-214ENST00000568848 NACAP1Q9BZK3 213 aa17.58■□□□□ 0.4
USB1-214ENST00000568848 RANBP17Q9H2T7 1088 aaKnown RBP17.58■□□□□ 0.4
USB1-214ENST00000568848 SYNPO2Q9UMS6 1093 aa17.58■□□□□ 0.4
USB1-214ENST00000568848 FAM86C2PA6NEL3 165 aa17.57■□□□□ 0.4
USB1-214ENST00000568848 TAP1Q03518 808 aa17.57■□□□□ 0.4
USB1-214ENST00000568848 SYDE2Q5VT97 1194 aa17.57■□□□□ 0.4
USB1-214ENST00000568848 RPUSD2Q8IZ73 545 aaKnown RBP17.57■□□□□ 0.4
USB1-214ENST00000568848 TOMM22Q9NS69 142 aa17.57■□□□□ 0.4
USB1-214ENST00000568848 PCDHB15Q9Y5E8 787 aa17.57■□□□□ 0.4
USB1-214ENST00000568848 FDX1P10109 184 aa17.56■□□□□ 0.4
USB1-214ENST00000568848 PLA2G5P39877 138 aa17.56■□□□□ 0.4
USB1-214ENST00000568848 TMEM47Q9BQJ4 181 aa17.56■□□□□ 0.4
USB1-214ENST00000568848 MTG1Q9BT17 334 aaPredicted RBP17.56■□□□□ 0.4
USB1-214ENST00000568848 FTOQ9C0B1 505 aaKnown RBP eCLIP17.56■□□□□ 0.4
USB1-214ENST00000568848 MTUS1Q9ULD2 1270 aa17.56■□□□□ 0.4
USB1-214ENST00000568848 PLA2G6O60733 806 aa17.55■□□□□ 0.4
USB1-214ENST00000568848 SLC3A2P08195 630 aaKnown RBP17.55■□□□□ 0.4
USB1-214ENST00000568848 IQCF3P0C7M6 154 aa17.55■□□□□ 0.4
USB1-214ENST00000568848 HAND2P61296 217 aa17.55■□□□□ 0.4
USB1-214ENST00000568848 DEFB103AP81534 67 aa17.55■□□□□ 0.4
USB1-214ENST00000568848 GRB10Q13322 594 aa17.55■□□□□ 0.4
USB1-214ENST00000568848 GPNMBQ14956 572 aa17.55■□□□□ 0.4
USB1-214ENST00000568848 GDPD5Q8WTR4 605 aa17.55■□□□□ 0.4
USB1-214ENST00000568848 TBC1D5Q92609 795 aa17.55■□□□□ 0.4
USB1-214ENST00000568848 CTAGE1Q96RT6 745 aa17.55■□□□□ 0.4
USB1-214ENST00000568848 POLR3EQ9NVU0 708 aa17.55■□□□□ 0.4
USB1-214ENST00000568848 Q9Y3F1 56 aa17.55■□□□□ 0.4
USB1-214ENST00000568848 LPXNO60711 386 aa17.54■□□□□ 0.4
USB1-214ENST00000568848 GOLGA8HP0CJ92 632 aa17.54■□□□□ 0.4
USB1-214ENST00000568848 USH1GQ495M9 461 aa17.54■□□□□ 0.4
USB1-214ENST00000568848 HERC6Q8IVU3 1022 aa17.54■□□□□ 0.4
USB1-214ENST00000568848 FAM227BQ96M60 508 aa17.54■□□□□ 0.4
USB1-214ENST00000568848 CD320Q9NPF0 282 aa17.54■□□□□ 0.4
USB1-214ENST00000568848 RBM47A0AV96 593 aaKnown RBP17.53■□□□□ 0.4
USB1-214ENST00000568848 ERC2O15083 957 aa17.53■□□□□ 0.4
USB1-214ENST00000568848 SORBS3O60504 671 aa17.53■□□□□ 0.4
USB1-214ENST00000568848 RPS6P62753 249 aaKnown RBP17.53■□□□□ 0.4
USB1-214ENST00000568848 PDE4DQ08499 809 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms